Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33539 | Soybean | cytosol | 58.96 | 91.93 |
| KRH21498 | Soybean | cytosol | 91.63 | 91.63 |
| KRH10823 | Soybean | cytosol | 90.44 | 90.44 |
| KRH63496 | Soybean | cytosol | 68.13 | 89.06 |
| KRG89645 | Soybean | cytosol | 61.35 | 79.38 |
| KRH20474 | Soybean | nucleus | 80.08 | 78.21 |
| VIT_00s0586g00030.t01 | Wine grape | cytosol | 65.34 | 64.06 |
| KRH50016 | Soybean | cytosol, nucleus, plastid | 80.08 | 64.01 |
| KRH22129 | Soybean | nucleus | 63.74 | 62.99 |
| KRH27213 | Soybean | endoplasmic reticulum | 63.35 | 62.6 |
| KRH26075 | Soybean | endoplasmic reticulum | 62.95 | 62.2 |
| Solyc03g006490.2.1 | Tomato | cytosol | 62.55 | 62.06 |
| CDY26025 | Canola | cytosol | 62.55 | 62.06 |
| CDY53810 | Canola | cytosol | 62.15 | 61.66 |
| Bra019002.1-P | Field mustard | cytosol | 62.15 | 61.66 |
| PGSC0003DMT400033379 | Potato | cytosol | 62.15 | 61.66 |
| VIT_00s0561g00020.t01 | Wine grape | cytosol | 65.34 | 61.65 |
| PGSC0003DMT400057793 | Potato | cytosol | 62.55 | 61.57 |
| AT3G15450.1 | Thale cress | cytosol | 61.75 | 61.26 |
| CDY56826 | Canola | cytosol | 60.96 | 60.47 |
| Bra021110.1-P | Field mustard | cytosol | 60.96 | 60.47 |
| CDY20112 | Canola | cytosol | 60.96 | 60.47 |
| Solyc02g078500.2.1 | Tomato | unclear | 61.35 | 60.39 |
| CDX97669 | Canola | cytosol | 60.56 | 60.08 |
| Bra027243.1-P | Field mustard | cytosol | 60.56 | 60.08 |
| CDY21841 | Canola | plastid | 45.82 | 57.21 |
| CDX71441 | Canola | cytosol, mitochondrion, plastid, vacuole | 20.32 | 56.67 |
| Os04t0679400-01 | Rice | cytosol | 58.17 | 56.59 |
| Zm00001d026632_P001 | Maize | extracellular | 58.57 | 55.47 |
| GSMUA_Achr3P14300_001 | Banana | cytosol | 58.17 | 55.09 |
| EES13111 | Sorghum | cytosol, plastid | 57.37 | 54.75 |
| TraesCS2D01G600100.1 | Wheat | cytosol | 57.37 | 54.55 |
| TraesCS2A01G586500.1 | Wheat | cytosol | 57.37 | 54.55 |
| GSMUA_Achr10P... | Banana | cytosol | 57.77 | 54.51 |
| TraesCSU01G021600.1 | Wheat | cytosol | 56.97 | 54.17 |
| CDY21375 | Canola | cytosol | 16.33 | 53.25 |
| CDY61102 | Canola | cytosol | 17.53 | 53.01 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.8 | 51.65 |
| CDY07847 | Canola | cytosol | 17.13 | 50.59 |
| Bra037807.1-P | Field mustard | cytosol | 19.12 | 48.0 |
| KRH35440 | Soybean | cytosol, nucleus | 43.43 | 43.6 |
| KRG91376 | Soybean | cytosol, nucleus | 43.43 | 43.6 |
| KRH21458 | Soybean | cytosol | 22.31 | 43.41 |
| KRH20897 | Soybean | nucleus | 37.45 | 39.83 |
| KRH02111 | Soybean | cytosol | 37.05 | 39.41 |
| KRH51038 | Soybean | plastid | 36.65 | 39.15 |
| KRH10856 | Soybean | cytosol | 39.04 | 38.58 |
| HORVU2Hr1G118550.2 | Barley | cytosol | 35.46 | 36.33 |
| KRH11390 | Soybean | nucleus | 37.45 | 32.08 |
| KRH38367 | Soybean | extracellular | 14.34 | 29.75 |
| HORVU2Hr1G118570.2 | Barley | cytosol | 23.11 | 21.4 |
Protein Annotations
| EMBL:ACUP02009160 | EMBL:BT098490 | EnsemblPlants:KRH10843 | EnsemblPlantsGene:GLYMA_15G072400 | EntrezGene:100780697 | Gene3D:3.60.20.10 |
| InterPro:DUF3700 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PANTHER:PTHR11772 | PANTHER:PTHR11772:SF15 | PFAM:PF12481 |
| ProteinID:KRH10843 | ProteinID:KRH10843.1 | SMART:SM01172 | SUPFAM:SSF56235 | UniParc:UPI0001B165F0 | UniProt:C6TLA6 |
| MapMan:35.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr15:-:5540911..5542834
Molecular Weight (calculated)
27566.1 Da
IEP (calculated)
7.432
GRAVY (calculated)
-0.169
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGIFKEKLV KAPKELNSPA SLNSCTKPKL SHEILQDFMS CNSSNAFSMC FGNEALLAYS PSNKPSIHQR LFSGLDNIYC VFLGGLHNLS MLNKQYGLSK
101: GTNEAMFITE AYRTLRDRGP YPADQVLKEL EGSFGFVIYD NKDGTVFVAS GSNGQIGLYW GVAADGSIVI SENLELIKAS CAKSFAPFPN GCMFHSEHGL
201: MSIEHPTKKM KAMPRIDSEG FMCGANFNVD SQTKIQVMPR VGSEANWATW S
101: GTNEAMFITE AYRTLRDRGP YPADQVLKEL EGSFGFVIYD NKDGTVFVAS GSNGQIGLYW GVAADGSIVI SENLELIKAS CAKSFAPFPN GCMFHSEHGL
201: MSIEHPTKKM KAMPRIDSEG FMCGANFNVD SQTKIQVMPR VGSEANWATW S
001: MLAIFHEAFA HPPEELNSPA SEKCSKQPKL PEETLNDFLL RYPLNTFSMS FGQAAVLAYV RPSASFSIHQ RLFCGFDDIY CLFFGSLNNL CQLNKQYGLT
101: KTTNEAMFVI EAYRTLRDRG PYPADQVVKD LDGSFSFVVY DSKAGSVFTA LGSDGGVKLY WGIAADGSVV ISDDLDVIKE GCAKSFAPFP TGCMFHSEGG
201: LMSFEHPMNK IKAMPRVDSE GVLCGANFKV DVYNRVNSIP RRGSEANWSL
101: KTTNEAMFVI EAYRTLRDRG PYPADQVVKD LDGSFSFVVY DSKAGSVFTA LGSDGGVKLY WGIAADGSVV ISDDLDVIKE GCAKSFAPFP TGCMFHSEGG
201: LMSFEHPMNK IKAMPRVDSE GVLCGANFKV DVYNRVNSIP RRGSEANWSL
Arabidopsis Description
AT4g27450/F27G19_50 [Source:UniProtKB/TrEMBL;Acc:Q93V62]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.