Factsheet for VIT_00s0561g00020.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0020g04160.t01
VIT_07s0031g00460.t01
VIT_08s0056g01550.t01
VIT_14s0036g00050.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15450.1	VIT_07s0031g00460.t01	AT2G23420.1	21798944
AT3G15450.1	VIT_08s0056g01550.t01	AT3G62800.1	21798944
AT3G15450.1	VIT_05s0020g04160.t01	AT5G43830.1	21798944
AT3G15450.1	VIT_14s0036g00050.t01	AT5G43830.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0586g00030.t01	Wine grape	cytosol	94.74	98.44
VIT_19s0014g03130.t01	Wine grape	cytosol	69.17	72.16
KRH21498	Soybean	cytosol	63.53	67.33
KRH10823	Soybean	cytosol	63.53	67.33
PGSC0003DMT400033379	Potato	cytosol	62.41	65.61
Solyc02g078500.2.1	Tomato	unclear	62.78	65.49
PGSC0003DMT400057793	Potato	cytosol	62.78	65.49
KRH10843	Soybean	nucleus	61.65	65.34
Solyc03g006490.2.1	Tomato	cytosol	62.03	65.22
Bra019002.1-P	Field mustard	cytosol	60.9	64.03
KRH20474	Soybean	nucleus	61.65	63.81
CDY26025	Canola	cytosol	60.53	63.64
CDY53810	Canola	cytosol	60.15	63.24
AT3G15450.1	Thale cress	cytosol	60.15	63.24
CDY56826	Canola	cytosol	59.77	62.85
Bra021110.1-P	Field mustard	cytosol	59.4	62.45
Bra027243.1-P	Field mustard	cytosol	59.4	62.45
CDX97669	Canola	cytosol	59.4	62.45
CDY20112	Canola	cytosol	59.02	62.06
Os04t0679400-01	Rice	cytosol	59.4	61.24
Zm00001d026632_P001	Maize	extracellular	59.77	60.0
EES13111	Sorghum	cytosol, plastid	59.02	59.7
CDY21841	Canola	plastid	44.74	59.2
KRH33539	Soybean	cytosol	35.71	59.01
TraesCS2A01G586500.1	Wheat	cytosol	58.27	58.71
TraesCSU01G021600.1	Wheat	cytosol	57.89	58.33
TraesCS2D01G600100.1	Wheat	cytosol	57.89	58.33
CDY61102	Canola	cytosol	18.05	57.83
CDX71441	Canola	cytosol, mitochondrion, plastid, vacuole	19.55	57.78
GSMUA_Achr10P...	Banana	cytosol	57.52	57.52
KRH63496	Soybean	cytosol	40.98	56.77
GSMUA_Achr3P14300_001	Banana	cytosol	56.39	56.6
GSMUA_AchrUn_...	Banana	cytosol	50.38	55.37
CDY07847	Canola	cytosol	17.67	55.29
CDY21375	Canola	cytosol	15.79	54.55
KRG89645	Soybean	cytosol	37.97	52.06
KRH50016	Soybean	cytosol, nucleus, plastid	61.28	51.91
Bra037807.1-P	Field mustard	cytosol	19.17	51.0
VIT_05s0020g04160.t01	Wine grape	cytosol	45.49	48.59
VIT_14s0036g00050.t01	Wine grape	cytosol, extracellular, peroxisome	40.23	47.77
VIT_10s0597g00010.t01	Wine grape	cytosol	27.07	47.68
HORVU2Hr1G118550.2	Barley	cytosol	34.59	37.55
VIT_05s0020g02770.t01	Wine grape	cytosol, plastid	34.21	33.58
HORVU2Hr1G118570.2	Barley	cytosol	24.44	23.99

Protein Annotations

EntrezGene:100853236	wikigene:100853236	MapMan:35.1	ProteinID:CBI35710	ProteinID:CBI35710.3	UniProt:D7TYY3
InterPro:DUF3700	EMBL:FN596301	InterPro:IPR029055	EntrezGene:LOC100853236	wikigene:LOC100853236	InterPro:Ntn_hydrolases_N
PFAM:PF12481	PANTHER:PTHR11772	PANTHER:PTHR11772:SF15	SMART:SM01172	SUPFAM:SSF56235	UniParc:UPI00015CE37C
ArrayExpress:VIT_00s0561g00020	EnsemblPlantsGene:VIT_00s0561g00020	EnsemblPlants:VIT_00s0561g00020.t01	RefSeq:XP_003635407	RefSeq:XP_003635407.1	SEG:seg

Description

No Description!

Coordinates

chrUn:-:31867720..31869354

Molecular Weight (calculated)

29180.0 Da

IEP (calculated)

5.613

GRAVY (calculated)

-0.045

Length

266 amino acids

Sequence
(BLAST)

001: MLAIFNKGLV EPPQELNSPA SVKVSVKPKV PEETLKDFQS CHSTNAFLIS LGDAALLSYI PPCPPYSTQH RFFCGLDDIY CIFLGTLNNL CSLIRQYGLS
101: KGTNEAMLVI EAYRTLRDRG PYPADQVLKD MDGSFGFVLF DSKAGTVFAA LGADEGVKMY WGIGGDGWLV ISDNLEVIKA SCAKSFAPFP TGCMFHSEGG
201: LRSFEHPMNK MKAMPRIDSE GVMCGANFKV DDYSRIHSMP RVGSEANWAV WGALMSDSFE HSNITT

Best Arabidopsis Sequence Match ( AT4G27450.1 )
(BLAST)

001: MLAIFHEAFA HPPEELNSPA SEKCSKQPKL PEETLNDFLL RYPLNTFSMS FGQAAVLAYV RPSASFSIHQ RLFCGFDDIY CLFFGSLNNL CQLNKQYGLT
101: KTTNEAMFVI EAYRTLRDRG PYPADQVVKD LDGSFSFVVY DSKAGSVFTA LGSDGGVKLY WGIAADGSVV ISDDLDVIKE GCAKSFAPFP TGCMFHSEGG
201: LMSFEHPMNK IKAMPRVDSE GVLCGANFKV DVYNRVNSIP RRGSEANWSL

Arabidopsis Description

AT4g27450/F27G19_50 [Source:UniProtKB/TrEMBL;Acc:Q93V62]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.