Factsheet for Bra021110.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra007702.1-P
Bra027506.1-P
Bra039198.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15450.1	Bra039198.1-P	AT2G23420.1	21798944
AT3G15450.1	Bra007702.1-P	AT3G62800.1	21798944
AT3G15450.1	Bra027506.1-P	AT5G43830.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20112	Canola	cytosol	97.63	97.63
Bra027243.1-P	Field mustard	cytosol	92.49	92.49
AT3G15450.1	Thale cress	cytosol	88.54	88.54
Bra019002.1-P	Field mustard	cytosol	82.61	82.61
Bra026348.1-P	Field mustard	cytosol	70.36	71.2
Bra010404.1-P	Field mustard	cytosol	69.17	70.0
Bra037807.1-P	Field mustard	cytosol	26.88	68.0
KRH10823	Soybean	cytosol	62.06	62.55
KRH21498	Soybean	cytosol	61.26	61.75
VIT_00s0586g00030.t01	Wine grape	cytosol	62.45	61.72
KRH10843	Soybean	nucleus	60.47	60.96
VIT_00s0561g00020.t01	Wine grape	cytosol	62.45	59.4
PGSC0003DMT400057793	Potato	cytosol	59.29	58.82
Os04t0679400-01	Rice	cytosol	59.68	58.53
Solyc03g006490.2.1	Tomato	cytosol	58.5	58.5
PGSC0003DMT400033379	Potato	cytosol	58.5	58.5
Solyc02g078500.2.1	Tomato	unclear	58.5	58.04
KRH20474	Soybean	nucleus	58.89	57.98
GSMUA_Achr10P...	Banana	cytosol	60.47	57.52
TraesCS2D01G600100.1	Wheat	cytosol	59.29	56.82
TraesCS2A01G586500.1	Wheat	cytosol	59.29	56.82
Zm00001d026632_P001	Maize	extracellular	59.29	56.6
TraesCSU01G021600.1	Wheat	cytosol	58.89	56.44
GSMUA_Achr3P14300_001	Banana	cytosol	57.71	55.09
GSMUA_AchrUn_...	Banana	cytosol	52.17	54.55
EES13111	Sorghum	cytosol, plastid	56.52	54.37
KRH33539	Soybean	cytosol	33.99	53.42
KRH63496	Soybean	cytosol	39.13	51.56
Bra023707.1-P	Field mustard	cytosol	31.62	47.62
KRG89645	Soybean	cytosol	36.36	47.42
KRH50016	Soybean	cytosol, nucleus, plastid	58.5	47.13
Bra027506.1-P	Field mustard	cytosol	46.25	46.61
Bra001889.1-P	Field mustard	cytosol	45.85	46.59
Bra002216.1-P	Field mustard	cytosol	39.53	42.37
HORVU2Hr1G118550.2	Barley	cytosol	35.97	37.14
HORVU2Hr1G118570.2	Barley	cytosol	24.51	22.88

Protein Annotations

EnsemblPlants:Bra021110.1	EnsemblPlants:Bra021110.1-P	EnsemblPlantsGene:Bra021110	Gene3D:3.60.20.10	InterPro:DUF3700	InterPro:IPR029055
InterPro:Ntn_hydrolases_N	PANTHER:PTHR11772	PANTHER:PTHR11772:SF15	PFAM:PF12481	SMART:SM01172	SUPFAM:SSF56235
UniParc:UPI0002543F90	UniProt:M4DX64	MapMan:35.1	:	:	:

Description

AT3G15450 (E=1e-131) | unknown protein

Coordinates

chrA01:-:23935499..23936658

Molecular Weight (calculated)

27545.7 Da

IEP (calculated)

7.782

GRAVY (calculated)

-0.169

Length

253 amino acids

Sequence
(BLAST)

001: MLAIFQKAFA HPPEELNSPA SHFSGKTAKL PGETLSDFLS LHKDTAFSMN FGHSAVLAYS RPNNSLRQRL FCGIDGVYCM FLGTLSNLCT LNRQYGLTGK
101: NTSEAMFVIE AYRTLRDRGP YPADQVLRGL EGSFAFVVYD TQPSSVFSAL SSDGGESLYW GISGDGSVVM SDDVEIIKQG CAKSFAPFPT GCMFHSETGL
201: KSFEHPKNKM KAMTRIDSEG VICGANFKVD ACSKISAIPR RGSEANWALA NSR

Best Arabidopsis Sequence Match ( AT3G15450.1 )
(BLAST)

001: MLAIFQKAFA HPPEELNSPA SHFSGKTPKL PGETLSDFLS HHQNNAFSMN FGDSAVLAYA RQETSLRQRL FCGLDGIYCM FLGRLNNLCT LNRQYGLSGK
101: NSNEAMFVIE AYRTLRDRGP YPADQVLRGL EGSFAFVVYD TQTSSVFSAL SSDGGESLYW GISGDGSVVM SDDIQIIKQG CAKSFAPFPN GCMFHSETGL
201: KSFDHPTNMM KAMPRIDSEG VLCGASFKVD ACSKINSIPR RGSEANWALA NSR

Arabidopsis Description

Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9LE80]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.