Factsheet for Bra026348.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027506.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G27450.1	Bra027506.1-P	AT5G43830.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89248	Canola	cytosol	100.0	100.0
Bra010404.1-P	Field mustard	cytosol	96.4	96.4
AT4G27450.1	Thale cress	cytosol	95.6	95.6
KRH27213	Soybean	endoplasmic reticulum	84.4	83.07
KRH22129	Soybean	nucleus	84.0	82.68
VIT_19s0014g03130.t01	Wine grape	cytosol	82.8	81.18
KRH26075	Soybean	endoplasmic reticulum	80.4	79.13
Solyc12g013700.1.1	Tomato	cytosol	75.6	74.41
Bra019002.1-P	Field mustard	cytosol	74.0	73.12
Bra027243.1-P	Field mustard	cytosol	73.2	72.33
Bra021110.1-P	Field mustard	cytosol	71.2	70.36
Os04t0679400-01	Rice	cytosol	64.0	62.02
Zm00001d026632_P001	Maize	extracellular	64.4	60.75
GSMUA_Achr3P14300_001	Banana	cytosol	63.6	60.0
TraesCS2A01G586500.1	Wheat	cytosol	63.2	59.85
TraesCS2D01G600100.1	Wheat	cytosol	63.2	59.85
GSMUA_Achr10P...	Banana	cytosol	63.6	59.77
EES13111	Sorghum	cytosol, plastid	62.8	59.7
TraesCSU01G021600.1	Wheat	cytosol	62.8	59.47
GSMUA_AchrUn_...	Banana	cytosol	56.4	58.26
Bra037807.1-P	Field mustard	cytosol	20.8	52.0
Bra023707.1-P	Field mustard	cytosol	34.8	51.79
Bra027506.1-P	Field mustard	cytosol	47.6	47.41
Bra001889.1-P	Field mustard	cytosol	45.6	45.78
Bra002216.1-P	Field mustard	cytosol	40.4	42.8
HORVU2Hr1G118550.2	Barley	cytosol	40.0	40.82
HORVU2Hr1G118570.2	Barley	cytosol	24.4	22.51

Protein Annotations

EnsemblPlants:Bra026348.1	EnsemblPlants:Bra026348.1-P	EnsemblPlantsGene:Bra026348	Gene3D:3.60.20.10	InterPro:DUF3700	InterPro:IPR029055
InterPro:Ntn_hydrolases_N	PANTHER:PTHR11772	PANTHER:PTHR11772:SF15	PFAM:PF12481	SMART:SM01172	SUPFAM:SSF56235
UniParc:UPI0002545B13	UniProt:M4EC39	MapMan:35.1	:	:	:

Description

AT4G27450 (E=8e-140) | unknown protein

Coordinates

chrA01:-:9870968..9872183

Molecular Weight (calculated)

27554.7 Da

IEP (calculated)

5.620

GRAVY (calculated)

-0.107

Length

250 amino acids

Sequence
(BLAST)

001: MLAIFHEAFA HPPEELYSPA SEKCSKQPKL PEETLDDFLS RHSDNTFSMS FGKAAVLAYV RPSASFSVHQ RLFCGFDDIY CLFFGSLNNL CQLNKQYGLT
101: KTTNEAMFVI EAYRTLRDRG PYPADQVVKD LDGSFAFVVY DSKAGSVFTA LGSDGGVKLF WGIAADGSVV ISDDLDVIKE GCAKSFAPFP TGCMFHSEGG
201: LMSFEHPMNK IKAMPRVDSE GVLCGANFKV DVYTRVNSIP RRGSEANWSL

Best Arabidopsis Sequence Match ( AT4G27450.1 )
(BLAST)

001: MLAIFHEAFA HPPEELNSPA SEKCSKQPKL PEETLNDFLL RYPLNTFSMS FGQAAVLAYV RPSASFSIHQ RLFCGFDDIY CLFFGSLNNL CQLNKQYGLT
101: KTTNEAMFVI EAYRTLRDRG PYPADQVVKD LDGSFSFVVY DSKAGSVFTA LGSDGGVKLY WGIAADGSVV ISDDLDVIKE GCAKSFAPFP TGCMFHSEGG
201: LMSFEHPMNK IKAMPRVDSE GVLCGANFKV DVYNRVNSIP RRGSEANWSL

Arabidopsis Description

AT4g27450/F27G19_50 [Source:UniProtKB/TrEMBL;Acc:Q93V62]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.