Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0772000-01 | |
| Os03t0744600-01 | |
| Os03t0837300-02 | |
| Os04t0429800-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G586500.1 | Wheat | cytosol | 86.05 | 84.09 |
| TraesCSU01G021600.1 | Wheat | cytosol | 85.27 | 83.33 |
| TraesCS2D01G600100.1 | Wheat | cytosol | 85.27 | 83.33 |
| EES13111 | Sorghum | cytosol, plastid | 83.33 | 81.75 |
| Zm00001d026632_P001 | Maize | extracellular | 81.4 | 79.25 |
| GSMUA_Achr10P... | Banana | cytosol | 72.48 | 70.3 |
| GSMUA_Achr3P14300_001 | Banana | cytosol | 72.09 | 70.19 |
| KRH27213 | Soybean | endoplasmic reticulum | 65.12 | 66.14 |
| GSMUA_AchrUn_... | Banana | cytosol | 62.02 | 66.12 |
| KRH22129 | Soybean | nucleus | 64.73 | 65.75 |
| VIT_19s0014g03130.t01 | Wine grape | cytosol | 64.73 | 65.49 |
| CDY29312 | Canola | cytosol | 62.4 | 64.4 |
| AT4G27450.1 | Thale cress | cytosol | 62.02 | 64.0 |
| CDX89248 | Canola | cytosol | 62.02 | 64.0 |
| Bra026348.1-P | Field mustard | cytosol | 62.02 | 64.0 |
| CDY14279 | Canola | cytosol | 61.24 | 63.2 |
| Bra010404.1-P | Field mustard | cytosol | 61.24 | 63.2 |
| CDX97384 | Canola | cytosol | 61.24 | 63.2 |
| KRH26075 | Soybean | endoplasmic reticulum | 61.63 | 62.6 |
| VIT_00s0586g00030.t01 | Wine grape | cytosol | 61.24 | 61.72 |
| AT3G15450.1 | Thale cress | cytosol | 60.08 | 61.26 |
| Bra019002.1-P | Field mustard | cytosol | 60.08 | 61.26 |
| Solyc12g013700.1.1 | Tomato | cytosol | 60.08 | 61.02 |
| CDY26025 | Canola | cytosol | 59.69 | 60.87 |
| CDY53810 | Canola | cytosol | 59.69 | 60.87 |
| CDY56826 | Canola | cytosol | 59.3 | 60.47 |
| CDX97669 | Canola | cytosol | 59.3 | 60.47 |
| Bra027243.1-P | Field mustard | cytosol | 59.3 | 60.47 |
| CDY20112 | Canola | cytosol | 58.91 | 60.08 |
| Bra021110.1-P | Field mustard | cytosol | 58.53 | 59.68 |
| VIT_00s0561g00020.t01 | Wine grape | cytosol | 61.24 | 59.4 |
| KRH10823 | Soybean | cytosol | 57.36 | 58.96 |
| KRH10843 | Soybean | nucleus | 56.59 | 58.17 |
| KRH21498 | Soybean | cytosol | 56.59 | 58.17 |
| CDY61102 | Canola | cytosol | 18.6 | 57.83 |
| HORVU2Hr1G118550.2 | Barley | cytosol | 54.26 | 57.14 |
| PGSC0003DMT400057793 | Potato | cytosol | 55.43 | 56.08 |
| CDY21375 | Canola | cytosol | 16.67 | 55.84 |
| PGSC0003DMT400033379 | Potato | cytosol | 54.65 | 55.73 |
| CDY21841 | Canola | plastid | 43.41 | 55.72 |
| Solyc02g078500.2.1 | Tomato | unclear | 55.04 | 55.69 |
| KRH20474 | Soybean | nucleus | 55.04 | 55.25 |
| Solyc03g006490.2.1 | Tomato | cytosol | 53.88 | 54.94 |
| CDY07847 | Canola | cytosol | 17.83 | 54.12 |
| CDX71441 | Canola | cytosol, mitochondrion, plastid, vacuole | 18.6 | 53.33 |
| KRH33539 | Soybean | cytosol | 32.17 | 51.55 |
| Bra037807.1-P | Field mustard | cytosol | 19.38 | 50.0 |
| KRH63496 | Soybean | cytosol | 36.82 | 49.48 |
| KRG89645 | Soybean | cytosol | 34.11 | 45.36 |
| Os11t0147800-01 | Rice | cytosol | 40.7 | 44.3 |
| KRH50016 | Soybean | cytosol, nucleus, plastid | 53.88 | 44.27 |
| Os12t0145100-01 | Rice | cytosol, plastid | 39.92 | 43.28 |
| Os03t0744600-01 | Rice | plasma membrane | 41.47 | 42.63 |
| HORVU2Hr1G118570.2 | Barley | cytosol | 33.72 | 32.1 |
Protein Annotations
| EMBL:KR905689 | EnsemblPlants:Os04t0679400-01 | EnsemblPlantsGene:Os04g0679400 | EntrezGene:4337421 | Gene3D:3.60.20.10 | InterPro:DUF3700 |
| InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PANTHER:PTHR11772 | PANTHER:PTHR11772:SF14 | PFAM:PF12481 | ProteinID:BAS91654.1 |
| ProteinID:EAZ32430.1 | RefSeq:XP_015635960.1 | SEG:seg | SMART:SM01172 | SUPFAM:SSF56235 | UniParc:UPI00001A53DF |
| UniProt:A3AYP1 | MapMan:35.1 | : | : | : | : |
Description
Similar to H0801D08.15 protein. (Os04t0679400-01);Similar to H0801D08.15 protein. (Os04t0679400-02);Similar to H0801D08.15 protein. (Os04t0679400-03);Similar to H0801D08.15 protein. (Os04t0679400-04)
Coordinates
chr4:-:34694372..34696099
Molecular Weight (calculated)
27792.1 Da
IEP (calculated)
6.500
GRAVY (calculated)
-0.031
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAIFQKQVA HAPAELNSPR SSAAKPKNPD EILRDFHALH PIEAFSTSFG GGAALACVAG HARNGLSGYE RMFCGLDDIY CVFMGRLDNL SSLIRQYGLC
101: SRSTNEALLV IEAYRTLRDR GPYPADQVVK DLSGSFAFVV FDNKSGAVFA ALSTDGEVPL YWGIAADGSV VICDEREIVK GGCGKSYAPF PVGCMFHSEG
201: GLKSFEHPMN RLKAMPRVDS EGVMCGATFK VDTFTKINSM PRVGSATNWA ATWDDAAA
101: SRSTNEALLV IEAYRTLRDR GPYPADQVVK DLSGSFAFVV FDNKSGAVFA ALSTDGEVPL YWGIAADGSV VICDEREIVK GGCGKSYAPF PVGCMFHSEG
201: GLKSFEHPMN RLKAMPRVDS EGVMCGATFK VDTFTKINSM PRVGSATNWA ATWDDAAA
001: MLAIFHEAFA HPPEELNSPA SEKCSKQPKL PEETLNDFLL RYPLNTFSMS FGQAAVLAYV RPSASFSIHQ RLFCGFDDIY CLFFGSLNNL CQLNKQYGLT
101: KTTNEAMFVI EAYRTLRDRG PYPADQVVKD LDGSFSFVVY DSKAGSVFTA LGSDGGVKLY WGIAADGSVV ISDDLDVIKE GCAKSFAPFP TGCMFHSEGG
201: LMSFEHPMNK IKAMPRVDSE GVLCGANFKV DVYNRVNSIP RRGSEANWSL
101: KTTNEAMFVI EAYRTLRDRG PYPADQVVKD LDGSFSFVVY DSKAGSVFTA LGSDGGVKLY WGIAADGSVV ISDDLDVIKE GCAKSFAPFP TGCMFHSEGG
201: LMSFEHPMNK IKAMPRVDSE GVLCGANFKV DVYNRVNSIP RRGSEANWSL
Arabidopsis Description
AT4g27450/F27G19_50 [Source:UniProtKB/TrEMBL;Acc:Q93V62]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.