Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97384 | Canola | cytosol | 97.2 | 97.2 |
| Bra010404.1-P | Field mustard | cytosol | 96.0 | 96.0 |
| CDY14279 | Canola | cytosol | 96.0 | 96.0 |
| Bra026348.1-P | Field mustard | cytosol | 95.6 | 95.6 |
| CDX89248 | Canola | cytosol | 95.6 | 95.6 |
| CDY29312 | Canola | cytosol | 95.6 | 95.6 |
| KRH27213 | Soybean | endoplasmic reticulum | 84.4 | 83.07 |
| KRH22129 | Soybean | nucleus | 84.0 | 82.68 |
| VIT_19s0014g03130.t01 | Wine grape | cytosol | 82.0 | 80.39 |
| KRH26075 | Soybean | endoplasmic reticulum | 80.0 | 78.74 |
| Solyc12g013700.1.1 | Tomato | cytosol | 75.2 | 74.02 |
| AT3G15450.1 | Thale cress | cytosol | 71.2 | 70.36 |
| Os04t0679400-01 | Rice | cytosol | 64.0 | 62.02 |
| Zm00001d026632_P001 | Maize | extracellular | 64.4 | 60.75 |
| GSMUA_Achr3P14300_001 | Banana | cytosol | 63.6 | 60.0 |
| EES13111 | Sorghum | cytosol, plastid | 62.8 | 59.7 |
| TraesCS2D01G600100.1 | Wheat | cytosol | 62.8 | 59.47 |
| TraesCS2A01G586500.1 | Wheat | cytosol | 62.8 | 59.47 |
| TraesCSU01G021600.1 | Wheat | cytosol | 62.4 | 59.09 |
| GSMUA_Achr10P... | Banana | cytosol | 62.8 | 59.02 |
| GSMUA_AchrUn_... | Banana | cytosol | 56.0 | 57.85 |
| AT5G43830.1 | Thale cress | peroxisome, plastid | 47.2 | 47.01 |
| AT3G22850.1 | Thale cress | cytosol | 45.6 | 45.97 |
| AT5G19140.1 | Thale cress | plastid | 42.4 | 45.3 |
| HORVU2Hr1G118550.2 | Barley | cytosol | 39.6 | 40.41 |
| HORVU2Hr1G118570.2 | Barley | cytosol | 24.4 | 22.51 |
Protein Annotations
| Gene3D:3.60.20.10 | MapMan:35.1 | EntrezGene:828854 | UniProt:A0A178V0I5 | ProteinID:AEE85344.1 | EMBL:AF375452 |
| ArrayExpress:AT4G27450 | EnsemblPlantsGene:AT4G27450 | RefSeq:AT4G27450 | TAIR:AT4G27450 | RefSeq:AT4G27450-TAIR-G | EnsemblPlants:AT4G27450.1 |
| TAIR:AT4G27450.1 | EMBL:AY045885 | EMBL:AY087420 | EMBL:AY091306 | MEROPS:C44.A04 | InterPro:DUF3700 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0009506 | GO:GO:0016020 |
| InterPro:IPR029055 | RefSeq:NP_567775.1 | InterPro:Ntn_hydrolases_N | ProteinID:OAO98471.1 | PFAM:PF12481 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020003 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11772 | PANTHER:PTHR11772:SF15 | UniProt:Q93V62 |
| SMART:SM01172 | SUPFAM:SSF56235 | UniParc:UPI00000A027A | : | : | : |
Description
AT4g27450/F27G19_50 [Source:UniProtKB/TrEMBL;Acc:Q93V62]
Coordinates
chr4:-:13727370..13729002
Molecular Weight (calculated)
27623.9 Da
IEP (calculated)
5.649
GRAVY (calculated)
-0.099
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAIFHEAFA HPPEELNSPA SEKCSKQPKL PEETLNDFLL RYPLNTFSMS FGQAAVLAYV RPSASFSIHQ RLFCGFDDIY CLFFGSLNNL CQLNKQYGLT
101: KTTNEAMFVI EAYRTLRDRG PYPADQVVKD LDGSFSFVVY DSKAGSVFTA LGSDGGVKLY WGIAADGSVV ISDDLDVIKE GCAKSFAPFP TGCMFHSEGG
201: LMSFEHPMNK IKAMPRVDSE GVLCGANFKV DVYNRVNSIP RRGSEANWSL
101: KTTNEAMFVI EAYRTLRDRG PYPADQVVKD LDGSFSFVVY DSKAGSVFTA LGSDGGVKLY WGIAADGSVV ISDDLDVIKE GCAKSFAPFP TGCMFHSEGG
201: LMSFEHPMNK IKAMPRVDSE GVLCGANFKV DVYNRVNSIP RRGSEANWSL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.