Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97669 | Canola | cytosol | 97.63 | 97.63 |
| Bra027243.1-P | Field mustard | cytosol | 97.23 | 97.23 |
| CDY20112 | Canola | cytosol | 91.7 | 91.7 |
| AT3G15450.1 | Thale cress | cytosol | 89.33 | 89.33 |
| CDY53810 | Canola | cytosol | 81.82 | 81.82 |
| CDY21841 | Canola | plastid | 64.82 | 81.59 |
| CDY26025 | Canola | cytosol | 81.42 | 81.42 |
| CDY07847 | Canola | cytosol | 24.9 | 74.12 |
| CDY61102 | Canola | cytosol | 24.11 | 73.49 |
| CDX89248 | Canola | cytosol | 71.54 | 72.4 |
| CDY29312 | Canola | cytosol | 71.54 | 72.4 |
| CDX97384 | Canola | cytosol | 70.75 | 71.6 |
| CDY21375 | Canola | cytosol | 21.74 | 71.43 |
| CDY14279 | Canola | cytosol | 70.36 | 71.2 |
| CDX71441 | Canola | cytosol, mitochondrion, plastid, vacuole | 24.11 | 67.78 |
| KRH10823 | Soybean | cytosol | 62.45 | 62.95 |
| VIT_00s0586g00030.t01 | Wine grape | cytosol | 62.85 | 62.11 |
| KRH21498 | Soybean | cytosol | 61.26 | 61.75 |
| KRH10843 | Soybean | nucleus | 60.47 | 60.96 |
| VIT_00s0561g00020.t01 | Wine grape | cytosol | 62.85 | 59.77 |
| PGSC0003DMT400057793 | Potato | cytosol | 60.08 | 59.61 |
| Os04t0679400-01 | Rice | cytosol | 60.47 | 59.3 |
| Solyc03g006490.2.1 | Tomato | cytosol | 59.29 | 59.29 |
| PGSC0003DMT400033379 | Potato | cytosol | 59.29 | 59.29 |
| Solyc02g078500.2.1 | Tomato | unclear | 59.29 | 58.82 |
| KRH20474 | Soybean | nucleus | 58.5 | 57.59 |
| Zm00001d026632_P001 | Maize | extracellular | 60.08 | 57.36 |
| TraesCS2D01G600100.1 | Wheat | cytosol | 59.68 | 57.2 |
| TraesCS2A01G586500.1 | Wheat | cytosol | 59.68 | 57.2 |
| GSMUA_Achr10P... | Banana | cytosol | 60.08 | 57.14 |
| TraesCSU01G021600.1 | Wheat | cytosol | 59.29 | 56.82 |
| GSMUA_AchrUn_... | Banana | cytosol | 53.75 | 56.2 |
| GSMUA_Achr3P14300_001 | Banana | cytosol | 58.5 | 55.85 |
| EES13111 | Sorghum | cytosol, plastid | 57.71 | 55.51 |
| KRH33539 | Soybean | cytosol | 34.39 | 54.04 |
| KRH63496 | Soybean | cytosol | 39.53 | 52.08 |
| KRG89645 | Soybean | cytosol | 36.76 | 47.94 |
| CDY32931 | Canola | cytosol | 47.43 | 47.81 |
| CDY50809 | Canola | peroxisome | 47.04 | 47.41 |
| KRH50016 | Soybean | cytosol, nucleus, plastid | 58.1 | 46.82 |
| CDY61079 | Canola | cytosol | 45.06 | 45.78 |
| CDX92962 | Canola | cytosol | 45.06 | 45.78 |
| CDY59022 | Canola | cytosol | 40.32 | 43.59 |
| CDY47200 | Canola | cytosol | 39.92 | 43.16 |
| CDY02581 | Canola | cytosol | 39.92 | 43.16 |
| CDY13981 | Canola | cytosol | 39.92 | 42.8 |
| CDX92551 | Canola | cytosol | 39.92 | 42.8 |
| CDX88900 | Canola | cytosol | 39.53 | 42.73 |
| CDY59012 | Canola | cytosol | 40.32 | 40.32 |
| HORVU2Hr1G118550.2 | Barley | cytosol | 35.97 | 37.14 |
| CDY32292 | Canola | plasma membrane | 22.92 | 26.24 |
| CDX87121 | Canola | cytosol | 22.53 | 25.68 |
| CDX80239 | Canola | vacuole | 22.92 | 25.0 |
| HORVU2Hr1G118570.2 | Barley | cytosol | 24.9 | 23.25 |
| CDX76924 | Canola | mitochondrion | 12.65 | 16.08 |
Protein Annotations
| EnsemblPlants:CDY56826 | EnsemblPlantsGene:GSBRNA2T00020115001 | Gene3D:3.60.20.10 | InterPro:DUF3700 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N |
| PANTHER:PTHR11772 | PANTHER:PTHR11772:SF15 | PFAM:PF12481 | ProteinID:CDY56826 | ProteinID:CDY56826.1 | SMART:SM01172 |
| SUPFAM:SSF56235 | UniParc:UPI0004EE5038 | UniProt:A0A078IXY1 | MapMan:35.1 | : | : |
Description
BnaC05g37800DBnaC05g37800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXY1]
Coordinates
chrLK033521:-:33859..34938
Molecular Weight (calculated)
27485.7 Da
IEP (calculated)
7.389
GRAVY (calculated)
-0.166
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAIFQKAFA HPPEELNSPA SHSSGKYPKL PGETLSDFLS LHKDTAFSMT FGDSAVLAYS RPITPLRQRL FCGVDGIYCT FLGALTNLCT LNRQYGLAGK
101: NTSEAMFVIE AYRTLRDRGP YPADQVLRGL EGSFAFVVYD TQTSSVFSAL SSDGGESLYW GISGDGSVVM SDDVKIIKQG CAKSFAPFPT GCMFHSETGL
201: KSFEHPRNEM KAMPRIDSEG VLCGANFKVD ACSKVNGIPR RGSEANWALA NSR
101: NTSEAMFVIE AYRTLRDRGP YPADQVLRGL EGSFAFVVYD TQTSSVFSAL SSDGGESLYW GISGDGSVVM SDDVKIIKQG CAKSFAPFPT GCMFHSETGL
201: KSFEHPRNEM KAMPRIDSEG VLCGANFKVD ACSKVNGIPR RGSEANWALA NSR
001: MLAIFQKAFA HPPEELNSPA SHFSGKTPKL PGETLSDFLS HHQNNAFSMN FGDSAVLAYA RQETSLRQRL FCGLDGIYCM FLGRLNNLCT LNRQYGLSGK
101: NSNEAMFVIE AYRTLRDRGP YPADQVLRGL EGSFAFVVYD TQTSSVFSAL SSDGGESLYW GISGDGSVVM SDDIQIIKQG CAKSFAPFPN GCMFHSETGL
201: KSFDHPTNMM KAMPRIDSEG VLCGASFKVD ACSKINSIPR RGSEANWALA NSR
101: NSNEAMFVIE AYRTLRDRGP YPADQVLRGL EGSFAFVVYD TQTSSVFSAL SSDGGESLYW GISGDGSVVM SDDIQIIKQG CAKSFAPFPN GCMFHSETGL
201: KSFDHPTNMM KAMPRIDSEG VLCGASFKVD ACSKINSIPR RGSEANWALA NSR
Arabidopsis Description
Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9LE80]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.