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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 4
  • golgi 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:golgi, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07847 Canola cytosol 8.04 18.82
CDY21375 Canola cytosol 7.04 18.18
CDY61102 Canola cytosol 6.53 15.66
CDX92551 Canola cytosol 17.59 14.83
CDY13981 Canola cytosol 17.59 14.83
CDX88900 Canola cytosol 17.09 14.53
CDY02581 Canola cytosol 17.09 14.53
CDY59022 Canola cytosol 17.09 14.53
CDY47200 Canola cytosol 17.09 14.53
CDX89248 Canola cytosol 17.09 13.6
CDX97384 Canola cytosol 17.09 13.6
CDY14279 Canola cytosol 17.09 13.6
CDY29312 Canola cytosol 17.09 13.6
CDX97669 Canola cytosol 17.09 13.44
CDX71441 Canola cytosol, mitochondrion, plastid, vacuole 6.03 13.33
CDY59012 Canola cytosol 16.58 13.04
CDY20112 Canola cytosol 16.08 12.65
CDY56826 Canola cytosol 16.08 12.65
CDY61079 Canola cytosol 15.58 12.45
CDX92962 Canola cytosol 15.58 12.45
CDY26025 Canola cytosol 15.58 12.25
CDY53810 Canola cytosol 15.58 12.25
CDY21841 Canola plastid 12.06 11.94
CDY32931 Canola cytosol 14.07 11.16
CDY50809 Canola peroxisome 14.07 11.16
CDX87121 Canola cytosol 10.05 9.01
CDX80239 Canola vacuole 8.04 6.9
CDY32292 Canola plasma membrane 6.03 5.43
Protein Annotations
EnsemblPlants:CDX76924EnsemblPlantsGene:GSBRNA2T00127454001Gene3D:1.20.1050.10Gene3D:3.40.30.10InterPro:Glutathione-S-Trfase_C_sfPANTHER:PTHR11260
PANTHER:PTHR11260:SF493ProteinID:CDX76924ProteinID:CDX76924.1SEG:segSignalP:SignalP-noTMSUPFAM:SSF47616
TMHMM:TMhelixUniParc:UPI0004EF1392MapMan:18.8.1.4:::
Description
BnaC08g35100D
Coordinates
chrLK031808:-:2091762..2093582
Molecular Weight (calculated)
21973.7 Da
IEP (calculated)
8.200
GRAVY (calculated)
0.025
Length
199 amino acids
Sequence
(BLAST)
001: MTRRRLRLSN GRAVSSLPLF AFLSSSLSLP LCISFVFINN GKPVCESAIQ VQYIDEVWSD KNPLLPSDPY QRAQARFWVD FIDNGIEKVP LYRGSSIARV
101: INGISGIEKV HLMVALVSSF LIGKFGGGGD TLVAMTKKKT PQILKTDTAL KLAEKWVANM STPTEDDPTE AQQEARPPRA MDGCGENCMF LFVCILTVE
Best Arabidopsis Sequence Match ( AT1G78340.1 )
(BLAST)
001: MADEVILLDF WPSPFGVRAR IALREKGVEF EYREENLRDK SPLLLQMNPV HKKIPVLIHN GKPVCESMNV VQYIDEVWSD KNPILPSDPY QRAQARFWVD
101: FVDTKLFEPA DKIWQTKGEE QETAKKEYIE ALKILETELG DKPYFGGDTF GFVDIAMTGY YSWFEASEKL ANFSIEPECP TLMASAKRCL QRESVVQSLH
201: DSEKILAFAY KIRKIYCV
Arabidopsis Description
GSTU22Glutathione S-transferase U22 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYM1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.