Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53810 | Canola | cytosol | 96.84 | 96.84 |
| CDY20112 | Canola | cytosol | 82.61 | 82.61 |
| CDX97669 | Canola | cytosol | 82.21 | 82.21 |
| CDY56826 | Canola | cytosol | 81.42 | 81.42 |
| CDY21841 | Canola | plastid | 60.87 | 76.62 |
| CDY29312 | Canola | cytosol | 73.12 | 74.0 |
| CDX89248 | Canola | cytosol | 73.12 | 74.0 |
| CDY14279 | Canola | cytosol | 72.73 | 73.6 |
| CDX97384 | Canola | cytosol | 72.73 | 73.6 |
| CDY61102 | Canola | cytosol | 22.13 | 67.47 |
| CDY07847 | Canola | cytosol | 22.53 | 67.06 |
| CDY21375 | Canola | cytosol | 20.16 | 66.23 |
| KRH10823 | Soybean | cytosol | 62.85 | 63.35 |
| CDX71441 | Canola | cytosol, mitochondrion, plastid, vacuole | 22.53 | 63.33 |
| KRH21498 | Soybean | cytosol | 62.45 | 62.95 |
| VIT_00s0586g00030.t01 | Wine grape | cytosol | 63.64 | 62.89 |
| KRH10843 | Soybean | nucleus | 62.06 | 62.55 |
| VIT_00s0561g00020.t01 | Wine grape | cytosol | 63.64 | 60.53 |
| KRH20474 | Soybean | nucleus | 61.26 | 60.31 |
| Os04t0679400-01 | Rice | cytosol | 60.87 | 59.69 |
| PGSC0003DMT400033379 | Potato | cytosol | 58.89 | 58.89 |
| Zm00001d026632_P001 | Maize | extracellular | 61.66 | 58.87 |
| PGSC0003DMT400057793 | Potato | cytosol | 58.89 | 58.43 |
| EES13111 | Sorghum | cytosol, plastid | 60.47 | 58.17 |
| TraesCS2A01G586500.1 | Wheat | cytosol | 60.47 | 57.95 |
| TraesCS2D01G600100.1 | Wheat | cytosol | 60.47 | 57.95 |
| Solyc03g006490.2.1 | Tomato | cytosol | 57.71 | 57.71 |
| Solyc02g078500.2.1 | Tomato | unclear | 58.1 | 57.65 |
| TraesCSU01G021600.1 | Wheat | cytosol | 60.08 | 57.58 |
| GSMUA_Achr10P... | Banana | cytosol | 60.08 | 57.14 |
| GSMUA_Achr3P14300_001 | Banana | cytosol | 56.92 | 54.34 |
| GSMUA_AchrUn_... | Banana | cytosol | 51.78 | 54.13 |
| KRH33539 | Soybean | cytosol | 33.6 | 52.8 |
| KRH63496 | Soybean | cytosol | 39.92 | 52.6 |
| KRG89645 | Soybean | cytosol | 37.94 | 49.48 |
| KRH50016 | Soybean | cytosol, nucleus, plastid | 60.47 | 48.73 |
| CDY32931 | Canola | cytosol | 45.85 | 46.22 |
| CDY50809 | Canola | peroxisome | 45.06 | 45.42 |
| CDY61079 | Canola | cytosol | 43.48 | 44.18 |
| CDY47200 | Canola | cytosol | 40.71 | 44.02 |
| CDY02581 | Canola | cytosol | 40.71 | 44.02 |
| CDX92962 | Canola | cytosol | 43.08 | 43.78 |
| CDY59022 | Canola | cytosol | 39.92 | 43.16 |
| CDY13981 | Canola | cytosol | 39.92 | 42.8 |
| CDX92551 | Canola | cytosol | 39.92 | 42.8 |
| CDX88900 | Canola | cytosol | 39.53 | 42.73 |
| CDY59012 | Canola | cytosol | 39.92 | 39.92 |
| HORVU2Hr1G118550.2 | Barley | cytosol | 37.15 | 38.37 |
| CDX87121 | Canola | cytosol | 22.92 | 26.13 |
| CDY32292 | Canola | plasma membrane | 22.13 | 25.34 |
| CDX80239 | Canola | vacuole | 22.13 | 24.14 |
| HORVU2Hr1G118570.2 | Barley | cytosol | 24.11 | 22.51 |
| CDX76924 | Canola | mitochondrion | 12.25 | 15.58 |
Protein Annotations
| EnsemblPlants:CDY26025 | EnsemblPlantsGene:GSBRNA2T00033566001 | Gene3D:3.60.20.10 | InterPro:DUF3700 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N |
| PANTHER:PTHR11772 | PANTHER:PTHR11772:SF15 | PFAM:PF12481 | ProteinID:CDY26025 | ProteinID:CDY26025.1 | SMART:SM01172 |
| SUPFAM:SSF56235 | UniParc:UPI0004EB008E | UniProt:A0A078GHW9 | MapMan:35.1 | : | : |
Description
BnaC06g05990DBnaC06g05990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHW9]
Coordinates
chrLK032184:+:328246..329551
Molecular Weight (calculated)
27286.2 Da
IEP (calculated)
6.348
GRAVY (calculated)
-0.177
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAIFQKTFA HPPEELNSPA SNLSGKTPKL PGETLSDFLS NHPDSAFSMS FGDSAVLAFA RPENSHRPRM FSGIDGIYCV FLGALNNLCD LNKQYGLSGK
101: SSNEAMFVIE AYRTLRDRGP YPADQVLRGL DGSFAFVVYD AQTSSVFAAL GSDGAESLYW GIAADGSVVM SDDLKVIKQG CAKSFAPFPT GCMFHSESGL
201: MSYEHPKNKM KAMQRIDSEG VICGANFKVD ACSKINSIPR RGSEANWSLA SSS
101: SSNEAMFVIE AYRTLRDRGP YPADQVLRGL DGSFAFVVYD AQTSSVFAAL GSDGAESLYW GIAADGSVVM SDDLKVIKQG CAKSFAPFPT GCMFHSESGL
201: MSYEHPKNKM KAMQRIDSEG VICGANFKVD ACSKINSIPR RGSEANWSLA SSS
001: MLAIFQKAFA HPPEELNSPA SHFSGKTPKL PGETLSDFLS HHQNNAFSMN FGDSAVLAYA RQETSLRQRL FCGLDGIYCM FLGRLNNLCT LNRQYGLSGK
101: NSNEAMFVIE AYRTLRDRGP YPADQVLRGL EGSFAFVVYD TQTSSVFSAL SSDGGESLYW GISGDGSVVM SDDIQIIKQG CAKSFAPFPN GCMFHSETGL
201: KSFDHPTNMM KAMPRIDSEG VLCGASFKVD ACSKINSIPR RGSEANWALA NSR
101: NSNEAMFVIE AYRTLRDRGP YPADQVLRGL EGSFAFVVYD TQTSSVFSAL SSDGGESLYW GISGDGSVVM SDDIQIIKQG CAKSFAPFPN GCMFHSETGL
201: KSFDHPTNMM KAMPRIDSEG VLCGASFKVD ACSKINSIPR RGSEANWALA NSR
Arabidopsis Description
Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9LE80]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.