Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20474 | Soybean | nucleus | 75.48 | 92.22 |
| KRH10843 | Soybean | nucleus | 64.01 | 80.08 |
| KRH10823 | Soybean | cytosol | 63.06 | 78.88 |
| KRH21498 | Soybean | cytosol | 62.74 | 78.49 |
| KRH33539 | Soybean | cytosol | 39.17 | 76.4 |
| KRH63496 | Soybean | cytosol | 44.59 | 72.92 |
| KRG89645 | Soybean | cytosol | 40.76 | 65.98 |
| VIT_00s0586g00030.t01 | Wine grape | cytosol | 52.23 | 64.06 |
| KRH22129 | Soybean | nucleus | 50.96 | 62.99 |
| KRH27213 | Soybean | endoplasmic reticulum | 50.64 | 62.6 |
| KRH26075 | Soybean | endoplasmic reticulum | 50.32 | 62.2 |
| PGSC0003DMT400033379 | Potato | cytosol | 50.0 | 62.06 |
| VIT_00s0561g00020.t01 | Wine grape | cytosol | 51.91 | 61.28 |
| Solyc03g006490.2.1 | Tomato | cytosol | 49.36 | 61.26 |
| CDY26025 | Canola | cytosol | 48.73 | 60.47 |
| PGSC0003DMT400057793 | Potato | cytosol | 49.04 | 60.39 |
| Solyc02g078500.2.1 | Tomato | unclear | 49.04 | 60.39 |
| Bra019002.1-P | Field mustard | cytosol | 48.41 | 60.08 |
| CDY53810 | Canola | cytosol | 48.41 | 60.08 |
| AT3G15450.1 | Thale cress | cytosol | 47.13 | 58.5 |
| Bra021110.1-P | Field mustard | cytosol | 47.13 | 58.5 |
| CDY20112 | Canola | cytosol | 46.82 | 58.1 |
| CDY56826 | Canola | cytosol | 46.82 | 58.1 |
| CDX97669 | Canola | cytosol | 46.5 | 57.71 |
| Bra027243.1-P | Field mustard | cytosol | 46.5 | 57.71 |
| CDY21841 | Canola | plastid | 35.67 | 55.72 |
| GSMUA_Achr10P... | Banana | cytosol | 45.86 | 54.14 |
| Os04t0679400-01 | Rice | cytosol | 44.27 | 53.88 |
| Zm00001d026632_P001 | Maize | extracellular | 44.27 | 52.45 |
| EES13111 | Sorghum | cytosol, plastid | 43.63 | 52.09 |
| GSMUA_Achr3P14300_001 | Banana | cytosol | 43.31 | 51.32 |
| GSMUA_AchrUn_... | Banana | cytosol | 39.49 | 51.24 |
| TraesCS2A01G586500.1 | Wheat | cytosol | 42.99 | 51.14 |
| TraesCS2D01G600100.1 | Wheat | cytosol | 42.99 | 51.14 |
| TraesCSU01G021600.1 | Wheat | cytosol | 42.68 | 50.76 |
| CDX71441 | Canola | cytosol, mitochondrion, plastid, vacuole | 14.01 | 48.89 |
| CDY21375 | Canola | cytosol | 11.46 | 46.75 |
| CDY61102 | Canola | cytosol | 12.1 | 45.78 |
| KRH21458 | Soybean | cytosol | 18.47 | 44.96 |
| CDY07847 | Canola | cytosol | 11.78 | 43.53 |
| KRH35440 | Soybean | cytosol, nucleus | 34.39 | 43.2 |
| KRG91376 | Soybean | cytosol, nucleus | 34.39 | 43.2 |
| Bra037807.1-P | Field mustard | cytosol | 13.38 | 42.0 |
| KRH20897 | Soybean | nucleus | 29.94 | 39.83 |
| KRH02111 | Soybean | cytosol | 29.62 | 39.41 |
| KRH10856 | Soybean | cytosol | 31.85 | 39.37 |
| KRH51038 | Soybean | plastid | 28.98 | 38.72 |
| HORVU2Hr1G118550.2 | Barley | cytosol | 27.39 | 35.1 |
| KRH11390 | Soybean | nucleus | 31.85 | 34.13 |
| KRH38367 | Soybean | extracellular | 11.15 | 28.93 |
| HORVU2Hr1G118570.2 | Barley | cytosol | 16.56 | 19.19 |
Protein Annotations
| EMBL:ACUP02004653 | EnsemblPlants:KRH50016 | EnsemblPlantsGene:GLYMA_07G195300 | EntrezGene:100776430 | Gene3D:3.60.20.10 | InterPro:DUF3700 |
| InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PANTHER:PTHR11772 | PANTHER:PTHR11772:SF15 | PFAM:PF12481 | ProteinID:KRH50016 |
| ProteinID:KRH50016.1 | SMART:SM01172 | SUPFAM:SSF56235 | UniParc:UPI000295E368 | UniProt:K7L2P5 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr7:-:36383047..36385585
Molecular Weight (calculated)
34580.1 Da
IEP (calculated)
6.935
GRAVY (calculated)
-0.312
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MNHSTYYHCP FSKAITESHS LSESIWIITD FAYTLLGEGK KRKVVLTLEG NNTKPKEEAN MLAIFKDNLV NPPEELNSPA SLNSSKRSKL PNEILQEFQS
101: YNPSNAFSMS FGNDALLAYS PSNKPSIHNG FCVLDNIHCI FLGSLNNLSK LIKQYGLSKG TNDAMFIIEA YRTLRDRGPY PADQVLKELE GSFGFVIYDN
201: KDGTVFTASG SNGQIELFWG VAADGSVVIS ENLELIKASC AKSFAPFPAG CMLHSGHGLM SYEHPTRKMK PMPRTDSEGF MCGANFLVDS QSRKSMMPRV
301: GSEANWAPWG GSQA
101: YNPSNAFSMS FGNDALLAYS PSNKPSIHNG FCVLDNIHCI FLGSLNNLSK LIKQYGLSKG TNDAMFIIEA YRTLRDRGPY PADQVLKELE GSFGFVIYDN
201: KDGTVFTASG SNGQIELFWG VAADGSVVIS ENLELIKASC AKSFAPFPAG CMLHSGHGLM SYEHPTRKMK PMPRTDSEGF MCGANFLVDS QSRKSMMPRV
301: GSEANWAPWG GSQA
001: MLAIFQKAFA HPPEELNSPA SHFSGKTPKL PGETLSDFLS HHQNNAFSMN FGDSAVLAYA RQETSLRQRL FCGLDGIYCM FLGRLNNLCT LNRQYGLSGK
101: NSNEAMFVIE AYRTLRDRGP YPADQVLRGL EGSFAFVVYD TQTSSVFSAL SSDGGESLYW GISGDGSVVM SDDIQIIKQG CAKSFAPFPN GCMFHSETGL
201: KSFDHPTNMM KAMPRIDSEG VLCGASFKVD ACSKINSIPR RGSEANWALA NSR
101: NSNEAMFVIE AYRTLRDRGP YPADQVLRGL EGSFAFVVYD TQTSSVFSAL SSDGGESLYW GISGDGSVVM SDDIQIIKQG CAKSFAPFPN GCMFHSETGL
201: KSFDHPTNMM KAMPRIDSEG VLCGASFKVD ACSKINSIPR RGSEANWALA NSR
Arabidopsis Description
Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9LE80]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.