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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:plastid
WoLF PSORT:cytosol
YLoc:cytosol
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG91376 Soybean cytosol, nucleus 98.0 98.0
PGSC0003DMT400077577 Potato cytosol 77.2 76.89
VIT_05s0020g04160.t01 Wine grape cytosol 75.2 75.5
Solyc09g082780.2.1 Tomato nucleus 74.8 74.5
AT5G43830.1 Thale cress peroxisome, plastid 73.6 73.31
CDY61079 Canola cytosol 72.8 73.09
CDX92962 Canola cytosol 72.8 73.09
AT3G22850.1 Thale cress cytosol 72.4 72.98
Bra001889.1-P Field mustard cytosol 71.6 71.89
GSMUA_Achr3P30980_001 Banana plastid 68.4 69.23
GSMUA_Achr2P08920_001 Banana cytosol 68.0 68.83
GSMUA_Achr1P14100_001 Banana cytosol 68.0 68.55
CDY50809 Canola peroxisome 67.6 67.33
HORVU5Hr1G105840.4 Barley cytosol 66.4 67.21
CDY32931 Canola cytosol 67.2 66.93
Bra027506.1-P Field mustard cytosol 67.2 66.93
TraesCS5D01G445900.1 Wheat cytosol 66.0 66.8
TraesCS5A01G438800.1 Wheat cytosol 66.0 66.8
KXG37583 Sorghum plastid 67.6 66.02
TraesCS5B01G441600.1 Wheat cytosol 65.2 65.99
Os03t0744600-01 Rice plasma membrane 66.0 65.74
VIT_14s0036g00050.t01 Wine grape cytosol, extracellular, peroxisome 58.8 65.62
EER93297 Sorghum cytosol 65.2 65.46
HORVU5Hr1G094370.1 Barley cytosol, peroxisome, plastid 65.6 65.34
TraesCS5A01G383200.1 Wheat golgi, unclear 65.6 65.34
TraesCS5D01G392600.1 Wheat peroxisome 65.2 64.68
TraesCS5B01G387700.1 Wheat golgi 65.2 63.92
GSMUA_Achr4P07750_001 Banana cytosol 61.6 62.35
KRH21458 Soybean cytosol 26.0 50.39
KRH27213 Soybean endoplasmic reticulum 47.2 46.46
KRH22129 Soybean nucleus 46.8 46.06
KRH26075 Soybean endoplasmic reticulum 45.6 44.88
Zm00001d033983_P001 Maize cytosol 66.8 44.65
KRH02111 Soybean cytosol 42.0 44.49
KRH51038 Soybean plastid 41.6 44.26
KRH10856 Soybean cytosol 44.8 44.09
KRH10843 Soybean nucleus 43.6 43.43
KRH20897 Soybean nucleus 40.8 43.22
KRH21498 Soybean cytosol 43.2 43.03
KRH10823 Soybean cytosol 43.2 43.03
KRH20474 Soybean nucleus 43.6 42.41
KRH33539 Soybean cytosol 24.8 38.51
KRH63496 Soybean cytosol 28.0 36.46
KRH11390 Soybean nucleus 41.6 35.49
KRG89645 Soybean cytosol 26.8 34.54
KRH50016 Soybean cytosol, nucleus, plastid 43.2 34.39
KRH38367 Soybean extracellular 15.2 31.41
Protein Annotations
EMBL:ACUP02006676EnsemblPlants:KRH35440EnsemblPlantsGene:GLYMA_10G243300EntrezGene:100500104Gene3D:3.60.20.10InterPro:DUF3700
InterPro:IPR029055InterPro:Ntn_hydrolases_NPANTHER:PTHR11772PANTHER:PTHR11772:SF8PFAM:PF12481ProteinID:KRH35440
ProteinID:KRH35440.1SEG:segSMART:SM01172SUPFAM:SSF56235UniParc:UPI000233C7F4UniProt:I1LDZ4
MapMan:35.1:::::
Description
hypothetical protein
Coordinates
chr10:-:47178036..47180707
Molecular Weight (calculated)
26830.6 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.074
Length
250 amino acids
Sequence
(BLAST)
001: MLAVFDKSVA KSPEGLQSPH SNSVSALKDG FLAEHFSSVH PGSVTVNLGS SGLLAYSLHK QNPLLPRLFA VVDDIFCLFQ GHLENVANLK QQYGLNKTAT
101: EVIIIIEAYR TLRDRGPYPA AQVVRDFQGK FAFILYDSGS KTAFVAADAD GSVPFVWGTD ADGNLVFSDE TEIVTKSCGK SYAPFPKGFF FSTSGGLSSF
201: EHPLNEVKPV PRVDSSGQVC GATFKVDAEA KKEATGMPRV GSAANWSNNI
Best Arabidopsis Sequence Match ( AT3G22850.1 )
(BLAST)
001: MLAIFDKNVA KTPEALQGQE GGSVCALKDR FLPNHFSSVY PGAVTINLGS SGFIACSLEK QNPLLPRLFA VVDDMFCIFQ GHIENVPILK QQYGLTKTAT
101: EVTIVIEAYR TLRDRGPYSA EQVVRDFQGK FGFMLYDCST QNVFLAGDVD GSVPLYWGTD AEGHLVVSDD VETVKKGCGK SFAPFPKGCF FTSSGGLRSY
201: EHPSNELKPV PRVDSSGEVC GVTFKVDSEA KKEAMPRVGS VQNWSKQI
Arabidopsis Description
Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9LIL3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.