Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- peroxisome 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G094370.1 | Barley | cytosol, peroxisome, plastid | 87.65 | 87.65 |
| TraesCS5A01G383200.1 | Wheat | golgi, unclear | 87.25 | 87.25 |
| KXG37583 | Sorghum | plastid | 88.84 | 87.11 |
| TraesCS5D01G392600.1 | Wheat | peroxisome | 87.25 | 86.9 |
| TraesCS5B01G387700.1 | Wheat | golgi | 86.85 | 85.49 |
| GSMUA_Achr1P14100_001 | Banana | cytosol | 68.92 | 69.76 |
| GSMUA_Achr3P30980_001 | Banana | plastid | 68.53 | 69.64 |
| GSMUA_Achr2P08920_001 | Banana | cytosol | 66.53 | 67.61 |
| VIT_05s0020g04160.t01 | Wine grape | cytosol | 65.74 | 66.27 |
| KRH35440 | Soybean | cytosol, nucleus | 65.74 | 66.0 |
| PGSC0003DMT400077577 | Potato | cytosol | 65.74 | 65.74 |
| KRG91376 | Soybean | cytosol, nucleus | 64.94 | 65.2 |
| Solyc09g082780.2.1 | Tomato | nucleus | 64.14 | 64.14 |
| GSMUA_Achr4P07750_001 | Banana | cytosol | 62.95 | 63.97 |
| CDY61079 | Canola | cytosol | 60.96 | 61.45 |
| CDX92962 | Canola | cytosol | 60.96 | 61.45 |
| Bra001889.1-P | Field mustard | cytosol | 60.96 | 61.45 |
| VIT_14s0036g00050.t01 | Wine grape | cytosol, extracellular, peroxisome | 54.18 | 60.71 |
| AT3G22850.1 | Thale cress | cytosol | 58.96 | 59.68 |
| Zm00001d033983_P001 | Maize | cytosol | 88.05 | 59.09 |
| AT5G43830.1 | Thale cress | peroxisome, plastid | 58.17 | 58.17 |
| CDY50809 | Canola | peroxisome | 55.38 | 55.38 |
| CDY32931 | Canola | cytosol | 54.58 | 54.58 |
| Bra027506.1-P | Field mustard | cytosol | 54.58 | 54.58 |
| Os11t0147800-01 | Rice | cytosol | 41.83 | 44.3 |
| Os12t0145100-01 | Rice | cytosol, plastid | 40.64 | 42.86 |
| Os04t0679400-01 | Rice | cytosol | 42.63 | 41.47 |
Protein Annotations
| EMBL:AB110189 | EMBL:AK065730 | EnsemblPlants:Os03t0744600-01 | EnsemblPlantsGene:Os03g0744600 | EntrezGene:4334077 | Gene3D:3.60.20.10 |
| InterPro:DUF3700 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PANTHER:PTHR11772 | PANTHER:PTHR11772:SF8 | PFAM:PF12481 |
| ProteinID:ABF98823.1 | ProteinID:BAF13152.2 | ProteinID:BAS86335.1 | RefSeq:XP_015632620.1 | SEG:seg | SMART:SM01172 |
| SUPFAM:SSF56235 | UniParc:UPI00001AB0C9 | UniProt:Q7XXR0 | MapMan:35.1 | : | : |
Description
Similar to Ripening-associated protein (Fragment). (Os03t0744600-01)
Coordinates
chr3:-:30560821..30563674
Molecular Weight (calculated)
26434.3 Da
IEP (calculated)
6.503
GRAVY (calculated)
0.026
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAVFDPTVA KCPEGLRSPP VAGGAVAAGG AGALMKGFAG AHADAVTVSL GPAGALAYSA ANQSPLVPRL FGAVNDIFCL FQGHIENIAS LKQHYGLSKT
101: ATEVTILIEA YRTLRDRGPL PASQVVRDLS GKFTFILYDT LSKSTFVAAD ADGSIPFFWG VDSENHLVFS DNVDLLKASC GNSFAPFPKG CFYTTSGGLQ
201: SFEHPLNELK PVPRVDSQGQ MCGSNYKVDS EAKKDSGIPR VGSAADWSNH F
101: ATEVTILIEA YRTLRDRGPL PASQVVRDLS GKFTFILYDT LSKSTFVAAD ADGSIPFFWG VDSENHLVFS DNVDLLKASC GNSFAPFPKG CFYTTSGGLQ
201: SFEHPLNELK PVPRVDSQGQ MCGSNYKVDS EAKKDSGIPR VGSAADWSNH F
001: MLAIFDKNVA KTPEALQGQE GGSVCALKDR FLPNHFSSVY PGAVTINLGS SGFIACSLEK QNPLLPRLFA VVDDMFCIFQ GHIENVPILK QQYGLTKTAT
101: EVTIVIEAYR TLRDRGPYSA EQVVRDFQGK FGFMLYDCST QNVFLAGDVD GSVPLYWGTD AEGHLVVSDD VETVKKGCGK SFAPFPKGCF FTSSGGLRSY
201: EHPSNELKPV PRVDSSGEVC GVTFKVDSEA KKEAMPRVGS VQNWSKQI
101: EVTIVIEAYR TLRDRGPYSA EQVVRDFQGK FGFMLYDCST QNVFLAGDVD GSVPLYWGTD AEGHLVVSDD VETVKKGCGK SFAPFPKGCF FTSSGGLRSY
201: EHPSNELKPV PRVDSSGEVC GVTFKVDSEA KKEAMPRVGS VQNWSKQI
Arabidopsis Description
Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9LIL3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.