Factsheet for TraesCS5A01G383200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear

Predictor Summary:

mitochondrion 2
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, unclear
Any Predictor:	cytosol, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G392600.1	Wheat	peroxisome	99.6	99.21
HORVU5Hr1G094370.1	Barley	cytosol, peroxisome, plastid	98.41	98.41
TraesCS5B01G387700.1	Wheat	golgi	98.41	96.86
Os03t0744600-01	Rice	plasma membrane	87.25	87.25
KXG37583	Sorghum	plastid	87.25	85.55
GSMUA_Achr3P30980_001	Banana	plastid	70.52	71.66
GSMUA_Achr1P14100_001	Banana	cytosol	70.52	71.37
GSMUA_Achr2P08920_001	Banana	cytosol	66.93	68.02
VIT_05s0020g04160.t01	Wine grape	cytosol	66.53	67.07
GSMUA_Achr4P07750_001	Banana	cytosol	65.34	66.4
KRH35440	Soybean	cytosol, nucleus	65.34	65.6
PGSC0003DMT400077577	Potato	cytosol	65.34	65.34
TraesCS5A01G438800.1	Wheat	cytosol	64.14	65.18
KRG91376	Soybean	cytosol, nucleus	64.54	64.8
Solyc09g082780.2.1	Tomato	nucleus	64.14	64.14
Bra001889.1-P	Field mustard	cytosol	62.55	63.05
CDY61079	Canola	cytosol	61.75	62.25
CDX92962	Canola	cytosol	61.75	62.25
VIT_14s0036g00050.t01	Wine grape	cytosol, extracellular, peroxisome	54.98	61.61
AT5G43830.1	Thale cress	peroxisome, plastid	59.76	59.76
AT3G22850.1	Thale cress	cytosol	58.96	59.68
Zm00001d033983_P001	Maize	cytosol	85.66	57.49
CDY50809	Canola	peroxisome	57.37	57.37
CDY32931	Canola	cytosol	56.57	56.57
Bra027506.1-P	Field mustard	cytosol	56.57	56.57
TraesCS5A01G134000.1	Wheat	golgi	42.23	44.92
TraesCS2A01G586500.1	Wheat	cytosol	46.61	44.32

Protein Annotations

EnsemblPlants:TraesCS5A01G383200.1	EnsemblPlantsGene:TraesCS5A01G383200	Gene3D:3.60.20.10	InterPro:DUF3700	InterPro:IPR029055	InterPro:Ntn_hydrolases_N
PANTHER:PTHR11772	PANTHER:PTHR11772:SF8	PFAM:PF12481	SEG:seg	SMART:SM01172	SUPFAM:SSF56235
TIGR:cd01910	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:580947754..580950074

Molecular Weight (calculated)

26409.1 Da

IEP (calculated)

6.008

GRAVY (calculated)

-0.041

Length

251 amino acids

Sequence
(BLAST)

001: MLAVFDQTVA KCPEGLRSPP AAGAAAGGGG AAALMKGFAA ANDAAVTVSL GSAGALAYSS ANKNPLVPRM FGSVNDIFCL FQGHVENIGN LKQHYGLSKT
101: ANEVTILIEA YRTLRDRGPL PASQVVRDLS GRFAFILYDT VSKSTFVAAD ADGSIPFFWG VDSEDHLVFS DDNELLKAGC GNSFAPFPKG CFYTTSGGLQ
201: SFEHPLNELK AVPRVDSQGQ MCGSTFKVDS EAKKDSGIPR VGSAADWSNH F

Best Arabidopsis Sequence Match ( AT5G43830.1 )
(BLAST)

001: MLAVFEKTVA NSPEALQSPH SSESAFALKD GSLATHFASV NPNSVTLNFG SSGFVAYSLD NPDPRVPRLF AVVDDIFCLF QGHIENLPFL KQQYGLNKIT
101: NEAIIVIEAY RTLRDRGPYP VDKVVRDFHG KFAFILFDSV KKTVFAAADA DGSVPFFWGT DAEGHLVFSD NTEMVKKGCA KSYGPFPKGC FFTSSGGLRS
201: FEHPKNELKP VPRVDSSGDV CGATFKVDAE TKREGTKMPR VDSSQNWAGH I

Arabidopsis Description

Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9FG81]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.