Factsheet for GSMUA_Achr1P14100_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P30980_001	Banana	plastid	85.89	86.23
GSMUA_Achr2P08920_001	Banana	cytosol	84.27	84.62
GSMUA_Achr4P07750_001	Banana	cytosol	76.61	76.92
PGSC0003DMT400077577	Potato	cytosol	71.77	70.92
VIT_05s0020g04160.t01	Wine grape	cytosol	70.97	70.68
TraesCS5A01G383200.1	Wheat	golgi, unclear	71.37	70.52
TraesCS5D01G392600.1	Wheat	peroxisome	71.37	70.24
Solyc09g082780.2.1	Tomato	nucleus	70.56	69.72
HORVU5Hr1G094370.1	Barley	cytosol, peroxisome, plastid	70.56	69.72
TraesCS5B01G387700.1	Wheat	golgi	70.97	69.02
Os03t0744600-01	Rice	plasma membrane	69.76	68.92
TraesCS5A01G438800.1	Wheat	cytosol	67.74	68.02
HORVU5Hr1G105840.4	Barley	cytosol	67.74	68.02
KRH35440	Soybean	cytosol, nucleus	68.55	68.0
AT3G22850.1	Thale cress	cytosol	67.34	67.34
TraesCS5D01G445900.1	Wheat	cytosol	66.94	67.21
KXG37583	Sorghum	plastid	69.35	67.19
KRG91376	Soybean	cytosol, nucleus	67.34	66.8
Bra001889.1-P	Field mustard	cytosol	66.94	66.67
CDX92962	Canola	cytosol	66.53	66.27
CDY61079	Canola	cytosol	66.53	66.27
TraesCS5B01G441600.1	Wheat	cytosol	65.32	65.59
EER93297	Sorghum	cytosol	65.73	65.46
VIT_14s0036g00050.t01	Wine grape	cytosol, extracellular, peroxisome	58.06	64.29
AT5G43830.1	Thale cress	peroxisome, plastid	62.5	61.75
CDY50809	Canola	peroxisome	59.68	58.96
CDY32931	Canola	cytosol	59.27	58.57
Bra027506.1-P	Field mustard	cytosol	59.27	58.57
GSMUA_Achr8P00370_001	Banana	cytosol	43.95	46.19
Zm00001d033983_P001	Maize	cytosol	68.95	45.72
GSMUA_Achr8P08600_001	Banana	cytosol	42.34	44.49
GSMUA_Achr10P...	Banana	cytosol	45.97	42.86
GSMUA_Achr3P14300_001	Banana	cytosol	44.76	41.89
GSMUA_Achr10P...	Banana	cytosol	43.15	41.63
GSMUA_AchrUn_...	Banana	cytosol	37.9	38.84
GSMUA_Achr11P...	Banana	cytosol	35.48	38.1

Protein Annotations

EnsemblPlants:GSMUA_Achr1P14100_001	EnsemblPlants:GSMUA_Achr1T14100_001	EnsemblPlantsGene:GSMUA_Achr1G14100_001	Gene3D:3.60.20.10	InterPro:DUF3700	InterPro:IPR029055
InterPro:Ntn_hydrolases_N	PANTHER:PTHR11772	PANTHER:PTHR11772:SF8	PFAM:PF12481	SMART:SM01172	SUPFAM:SSF56235
UniParc:UPI0002964F33	UniProt:M0RZR8	MapMan:35.1	:	:	:

Description

Putative Stem-specific protein TSJT1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G14100_001]

Coordinates

chr1:-:10778637..10781537

Molecular Weight (calculated)

26471.2 Da

IEP (calculated)

5.704

GRAVY (calculated)

-0.117

Length

248 amino acids

Sequence
(BLAST)

001: MLAVFDRTVA KSPEGLRNPE AGGGDAAGRR LVDHFAAARE GAVVINLGSA GALAYASEKQ NPLLPRLFAV VDDIFCLFQG HIENITSLKQ QYGLGKTANE
101: VIIVIEAYKT LRDRGPFPAS QVLRDLGGKF AFILFDCSSN SAFIAGDADG SVPFFWGADA EDHLVLSDDV DTVKKGSGKS FAPFPKGCFF TTSGGLQSFE
201: HPLNELKAVP RVDSQGQVCG ATYKVDDKSK KDTGMPRVGS AADWSSQF

Best Arabidopsis Sequence Match ( AT3G22850.1 )
(BLAST)

001: MLAIFDKNVA KTPEALQGQE GGSVCALKDR FLPNHFSSVY PGAVTINLGS SGFIACSLEK QNPLLPRLFA VVDDMFCIFQ GHIENVPILK QQYGLTKTAT
101: EVTIVIEAYR TLRDRGPYSA EQVVRDFQGK FGFMLYDCST QNVFLAGDVD GSVPLYWGTD AEGHLVVSDD VETVKKGCGK SFAPFPKGCF FTSSGGLRSY
201: EHPSNELKPV PRVDSSGEVC GVTFKVDSEA KKEAMPRVGS VQNWSKQI

Arabidopsis Description

Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9LIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.