Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P14100_001 | Banana | cytosol | 86.23 | 85.89 |
| GSMUA_Achr4P07750_001 | Banana | cytosol | 83.0 | 83.0 |
| GSMUA_Achr2P08920_001 | Banana | cytosol | 81.78 | 81.78 |
| VIT_05s0020g04160.t01 | Wine grape | cytosol | 72.47 | 71.89 |
| TraesCS5A01G383200.1 | Wheat | golgi, unclear | 71.66 | 70.52 |
| HORVU5Hr1G094370.1 | Barley | cytosol, peroxisome, plastid | 71.66 | 70.52 |
| HORVU5Hr1G105840.4 | Barley | cytosol | 70.04 | 70.04 |
| TraesCS5D01G392600.1 | Wheat | peroxisome | 71.26 | 69.84 |
| PGSC0003DMT400077577 | Potato | cytosol | 70.85 | 69.72 |
| TraesCS5B01G387700.1 | Wheat | golgi | 71.66 | 69.41 |
| Solyc09g082780.2.1 | Tomato | nucleus | 69.64 | 68.53 |
| Os03t0744600-01 | Rice | plasma membrane | 69.64 | 68.53 |
| TraesCS5A01G438800.1 | Wheat | cytosol | 68.42 | 68.42 |
| KRH35440 | Soybean | cytosol, nucleus | 69.23 | 68.4 |
| TraesCS5D01G445900.1 | Wheat | cytosol | 67.21 | 67.21 |
| KRG91376 | Soybean | cytosol, nucleus | 68.02 | 67.2 |
| KXG37583 | Sorghum | plastid | 68.42 | 66.02 |
| TraesCS5B01G441600.1 | Wheat | cytosol | 65.59 | 65.59 |
| Bra001889.1-P | Field mustard | cytosol | 65.99 | 65.46 |
| VIT_14s0036g00050.t01 | Wine grape | cytosol, extracellular, peroxisome | 59.11 | 65.18 |
| CDY61079 | Canola | cytosol | 65.59 | 65.06 |
| CDX92962 | Canola | cytosol | 65.59 | 65.06 |
| EER93297 | Sorghum | cytosol | 65.18 | 64.66 |
| AT3G22850.1 | Thale cress | cytosol | 64.37 | 64.11 |
| AT5G43830.1 | Thale cress | peroxisome, plastid | 63.56 | 62.55 |
| CDY50809 | Canola | peroxisome | 60.32 | 59.36 |
| CDY32931 | Canola | cytosol | 59.92 | 58.96 |
| Bra027506.1-P | Field mustard | cytosol | 59.92 | 58.96 |
| Zm00001d033983_P001 | Maize | cytosol | 68.02 | 44.92 |
| GSMUA_Achr8P00370_001 | Banana | cytosol | 42.51 | 44.49 |
| GSMUA_Achr8P08600_001 | Banana | cytosol | 41.7 | 43.64 |
| GSMUA_Achr3P14300_001 | Banana | cytosol | 46.15 | 43.02 |
| GSMUA_Achr10P... | Banana | cytosol | 46.15 | 42.86 |
| GSMUA_Achr10P... | Banana | cytosol | 42.11 | 40.47 |
| GSMUA_Achr11P... | Banana | cytosol | 36.03 | 38.53 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.84 | 37.6 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P30980_001 | EnsemblPlants:GSMUA_Achr3T30980_001 | EnsemblPlantsGene:GSMUA_Achr3G30980_001 | Gene3D:3.60.20.10 | InterPro:DUF3700 | InterPro:IPR029055 |
| InterPro:Ntn_hydrolases_N | PANTHER:PTHR11772 | PANTHER:PTHR11772:SF8 | PFAM:PF12481 | SEG:seg | SMART:SM01172 |
| SUPFAM:SSF56235 | UniParc:UPI000294B490 | UniProt:M0SJB2 | MapMan:35.1 | : | : |
Description
Putative Stem-specific protein TSJT1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G30980_001]
Coordinates
chr3:+:29504118..29513281
Molecular Weight (calculated)
26439.3 Da
IEP (calculated)
6.126
GRAVY (calculated)
-0.080
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAVFDRAVA KSPEGLRAPA AEGGEGGGRL VSHFAAAREG AVVVSLGSAG TIAYTSEKQN PLLPRLFAVV DNIFCLFQGH VENITSLKQQ YGLGKTANEV
101: IIVIEAYKTL RDRGPFPASQ VVRDLSGKFA FILFDSSSNS TFIAADADGS VPFFWGADSE GHLVLCDDVD IVKKGCGKSF APFPKGCFFT TSGGLQSFEH
201: PLNELKAMPR VDSQGQVCGA TYKVDDQAKK ETKMPRVDSA ANWSSEY
101: IIVIEAYKTL RDRGPFPASQ VVRDLSGKFA FILFDSSSNS TFIAADADGS VPFFWGADSE GHLVLCDDVD IVKKGCGKSF APFPKGCFFT TSGGLQSFEH
201: PLNELKAMPR VDSQGQVCGA TYKVDDQAKK ETKMPRVDSA ANWSSEY
001: MLAIFDKNVA KTPEALQGQE GGSVCALKDR FLPNHFSSVY PGAVTINLGS SGFIACSLEK QNPLLPRLFA VVDDMFCIFQ GHIENVPILK QQYGLTKTAT
101: EVTIVIEAYR TLRDRGPYSA EQVVRDFQGK FGFMLYDCST QNVFLAGDVD GSVPLYWGTD AEGHLVVSDD VETVKKGCGK SFAPFPKGCF FTSSGGLRSY
201: EHPSNELKPV PRVDSSGEVC GVTFKVDSEA KKEAMPRVGS VQNWSKQI
101: EVTIVIEAYR TLRDRGPYSA EQVVRDFQGK FGFMLYDCST QNVFLAGDVD GSVPLYWGTD AEGHLVVSDD VETVKKGCGK SFAPFPKGCF FTSSGGLRSY
201: EHPSNELKPV PRVDSSGEVC GVTFKVDSEA KKEAMPRVGS VQNWSKQI
Arabidopsis Description
Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9LIL3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.