Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- extracellular 1
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P00370_001 | Banana | cytosol | 53.7 | 58.47 |
| GSMUA_Achr8P08600_001 | Banana | cytosol | 53.7 | 58.47 |
| GSMUA_Achr11P... | Banana | cytosol | 43.58 | 48.48 |
| GSMUA_Achr2P08920_001 | Banana | cytosol | 42.8 | 44.53 |
| GSMUA_Achr1P14100_001 | Banana | cytosol | 41.63 | 43.15 |
| GSMUA_Achr3P30980_001 | Banana | plastid | 40.47 | 42.11 |
| GSMUA_Achr4P07750_001 | Banana | cytosol | 35.41 | 36.84 |
| GSMUA_Achr3P14300_001 | Banana | cytosol | 36.97 | 35.85 |
| GSMUA_Achr10P... | Banana | cytosol | 36.97 | 35.71 |
| GSMUA_AchrUn_... | Banana | cytosol | 32.68 | 34.71 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P19960_001 | EnsemblPlants:GSMUA_Achr10T19960_001 | EnsemblPlantsGene:GSMUA_Achr10G19960_001 | Gene3D:3.60.20.10 | InterPro:DUF3700 | InterPro:GATase_2_dom |
| InterPro:IPR017932 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PANTHER:PTHR11772 | PANTHER:PTHR11772:SF18 | PFAM:PF12481 |
| PFscan:PS51278 | SMART:SM01172 | SUPFAM:SSF56235 | UniParc:UPI0002948D27 | UniProt:M0RJS1 | MapMan:35.1 |
Description
Putative Stem-specific protein TSJT1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G19960_001]
Coordinates
chr10:-:26135867..26136863
Molecular Weight (calculated)
28070.6 Da
IEP (calculated)
8.474
GRAVY (calculated)
-0.078
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGVFSGAVV SPPEELIRAG HRTPTAKKTA DKLLDAFLKN NPSSVAINIG SAARISYNHQ NQSLLQPRSF AVSDEIFCLF KGTLENLPSL KHQYGLGKNA
101: SEVVLVMEAY RALRDRAPYP TNLMLAHLVG NFAFIVFDNV TSTVFAASDG DGKVPLFMGI TADGYLAFSD DAEELRSACG KSLASFPPGC FLSTSTGLRS
201: YEHPKNKVTA LPAMEEEIWG TTFKVAWDCS ICHRKQKNRL FLNSISRSID STKWIAG
101: SEVVLVMEAY RALRDRAPYP TNLMLAHLVG NFAFIVFDNV TSTVFAASDG DGKVPLFMGI TADGYLAFSD DAEELRSACG KSLASFPPGC FLSTSTGLRS
201: YEHPKNKVTA LPAMEEEIWG TTFKVAWDCS ICHRKQKNRL FLNSISRSID STKWIAG
001: MLGIFSGAIV SPPEELVAAG SRTPSPKTTG STLVNRFVEK NPSAVSVQVG DYVQLAYSHH NESPLRPRSF GAKDEIFCLF QGSLDNLGSL KQQYGLAKNA
101: NEVLLVIEAY KTLRDRAPYP ANHVVAHLSG DFAFVVFDKS TSTLFVASDQ VGKVPLYWGI TADGYVAFAD DVDLLKGACG KSLASFPQGC YYSTALGGLR
201: SFENPKNKIT AVPANEGEIW GATFKVEGAT VLAD
101: NEVLLVIEAY KTLRDRAPYP ANHVVAHLSG DFAFVVFDKS TSTLFVASDQ VGKVPLYWGI TADGYVAFAD DVDLLKGACG KSLASFPQGC YYSTALGGLR
201: SFENPKNKIT AVPANEGEIW GATFKVEGAT VLAD
Arabidopsis Description
ATAILP1Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q94BR2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.