Factsheet for GSMUA_Achr4P07750_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P30980_001	Banana	plastid	83.0	83.0
GSMUA_Achr1P14100_001	Banana	cytosol	76.92	76.61
GSMUA_Achr2P08920_001	Banana	cytosol	73.28	73.28
VIT_05s0020g04160.t01	Wine grape	cytosol	67.21	66.67
TraesCS5A01G383200.1	Wheat	golgi, unclear	66.4	65.34
HORVU5Hr1G094370.1	Barley	cytosol, peroxisome, plastid	66.4	65.34
HORVU5Hr1G105840.4	Barley	cytosol	65.18	65.18
TraesCS5D01G392600.1	Wheat	peroxisome	65.99	64.68
TraesCS5B01G387700.1	Wheat	golgi	65.99	63.92
PGSC0003DMT400077577	Potato	cytosol	64.78	63.74
TraesCS5A01G438800.1	Wheat	cytosol	63.56	63.56
Solyc09g082780.2.1	Tomato	nucleus	64.37	63.35
Os03t0744600-01	Rice	plasma membrane	63.97	62.95
TraesCS5D01G445900.1	Wheat	cytosol	62.75	62.75
KXG37583	Sorghum	plastid	64.37	62.11
TraesCS5B01G441600.1	Wheat	cytosol	61.94	61.94
KRH35440	Soybean	cytosol, nucleus	62.35	61.6
VIT_14s0036g00050.t01	Wine grape	cytosol, extracellular, peroxisome	55.47	61.16
Bra001889.1-P	Field mustard	cytosol	61.13	60.64
KRG91376	Soybean	cytosol, nucleus	61.13	60.4
EER93297	Sorghum	cytosol	60.32	59.84
CDX92962	Canola	cytosol	60.32	59.84
CDY61079	Canola	cytosol	59.92	59.44
AT5G43830.1	Thale cress	peroxisome, plastid	59.92	58.96
AT3G22850.1	Thale cress	cytosol	58.7	58.47
CDY50809	Canola	peroxisome	58.3	57.37
CDY32931	Canola	cytosol	57.89	56.97
Bra027506.1-P	Field mustard	cytosol	57.89	56.97
Zm00001d033983_P001	Maize	cytosol	64.78	42.78
GSMUA_Achr10P...	Banana	cytosol	45.34	42.11
GSMUA_Achr8P00370_001	Banana	cytosol	39.27	41.1
GSMUA_Achr3P14300_001	Banana	cytosol	43.72	40.75
GSMUA_Achr8P08600_001	Banana	cytosol	38.87	40.68
GSMUA_AchrUn_...	Banana	cytosol	37.65	38.43
GSMUA_Achr11P...	Banana	cytosol	34.41	36.8
GSMUA_Achr10P...	Banana	cytosol	36.84	35.41

Protein Annotations

EnsemblPlants:GSMUA_Achr4P07750_001	EnsemblPlants:GSMUA_Achr4T07750_001	EnsemblPlantsGene:GSMUA_Achr4G07750_001	Gene3D:3.60.20.10	InterPro:DUF3700	InterPro:IPR029055
InterPro:Ntn_hydrolases_N	PANTHER:PTHR11772	PANTHER:PTHR11772:SF8	PFAM:PF12481	SMART:SM01172	SUPFAM:SSF56235
UniParc:UPI00029608BD	UniProt:M0SLZ2	MapMan:35.1	:	:	:

Description

Putative Stem-specific protein TSJT1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G07750_001]

Coordinates

chr4:+:5781497..5784404

Molecular Weight (calculated)

26906.0 Da

IEP (calculated)

7.180

GRAVY (calculated)

-0.096

Length

247 amino acids

Sequence
(BLAST)

001: MLAVFDRTVA KIPEGLRAPA AELGEGGSRL MGHFSATRDG AVVVNLGSGG AMAYTPEKHN PFFPRFLAVV DNVFCLFQGH VENIASLKQL YGLGKTTNEA
101: IIVIEAYKTL RDRGPFPASQ VVRDLRGHFA FVLFDISSNS TFIAADADGR VPFFWGADSE GHLVLSDDVD IVKKGCGRSF APFPRGCFFT TSGGLQSFQH
201: PLNELKAIPR VDSQGQVCGA IYEVDDQTKR ETRMPRVGST ANWSSHY

Best Arabidopsis Sequence Match ( AT5G43830.1 )
(BLAST)

001: MLAVFEKTVA NSPEALQSPH SSESAFALKD GSLATHFASV NPNSVTLNFG SSGFVAYSLD NPDPRVPRLF AVVDDIFCLF QGHIENLPFL KQQYGLNKIT
101: NEAIIVIEAY RTLRDRGPYP VDKVVRDFHG KFAFILFDSV KKTVFAAADA DGSVPFFWGT DAEGHLVFSD NTEMVKKGCA KSYGPFPKGC FFTSSGGLRS
201: FEHPKNELKP VPRVDSSGDV CGATFKVDAE TKREGTKMPR VDSSQNWAGH I

Arabidopsis Description

Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9FG81]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.