Factsheet for VIT_14s0036g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
peroxisome 1
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g04160.t01	Wine grape	cytosol	82.59	74.3
PGSC0003DMT400077577	Potato	cytosol	70.54	62.95
Solyc09g082780.2.1	Tomato	nucleus	68.3	60.96
GSMUA_Achr3P30980_001	Banana	plastid	65.18	59.11
KRH35440	Soybean	cytosol, nucleus	65.62	58.8
KRG91376	Soybean	cytosol, nucleus	65.18	58.4
GSMUA_Achr1P14100_001	Banana	cytosol	64.29	58.06
Bra001889.1-P	Field mustard	cytosol	64.29	57.83
GSMUA_Achr2P08920_001	Banana	cytosol	63.39	57.49
CDX92962	Canola	cytosol	63.84	57.43
CDY61079	Canola	cytosol	63.84	57.43
AT3G22850.1	Thale cress	cytosol	63.39	57.26
AT5G43830.1	Thale cress	peroxisome, plastid	63.84	56.97
TraesCS5D01G445900.1	Wheat	cytosol	61.16	55.47
TraesCS5A01G438800.1	Wheat	cytosol	61.16	55.47
HORVU5Hr1G105840.4	Barley	cytosol	61.16	55.47
GSMUA_Achr4P07750_001	Banana	cytosol	61.16	55.47
HORVU5Hr1G094370.1	Barley	cytosol, peroxisome, plastid	62.05	55.38
TraesCS5A01G383200.1	Wheat	golgi, unclear	61.61	54.98
TraesCS5D01G392600.1	Wheat	peroxisome	61.61	54.76
TraesCS5B01G387700.1	Wheat	golgi	62.05	54.51
TraesCS5B01G441600.1	Wheat	cytosol	59.82	54.25
Os03t0744600-01	Rice	plasma membrane	60.71	54.18
CDY50809	Canola	peroxisome	59.82	53.39
CDY32931	Canola	cytosol	59.38	52.99
Bra027506.1-P	Field mustard	cytosol	59.38	52.99
KXG37583	Sorghum	plastid	60.27	52.73
EER93297	Sorghum	cytosol	55.36	49.8
VIT_10s0597g00010.t01	Wine grape	cytosol	30.36	45.03
VIT_19s0014g03130.t01	Wine grape	cytosol	48.66	42.75
VIT_00s0586g00030.t01	Wine grape	cytosol	48.21	42.19
VIT_00s0561g00020.t01	Wine grape	cytosol	47.77	40.23
Zm00001d033983_P001	Maize	cytosol	59.38	35.56
VIT_05s0020g02770.t01	Wine grape	cytosol, plastid	37.95	31.37

Protein Annotations

EntrezGene:100241200	wikigene:100241200	Gene3D:3.60.20.10	MapMan:35.1	ProteinID:CCB47680	ProteinID:CCB47680.1
InterPro:DUF3700	UniProt:F6H640	EMBL:FN595241	InterPro:IPR029055	EntrezGene:LOC100241200	wikigene:LOC100241200
InterPro:Ntn_hydrolases_N	PFAM:PF12481	PANTHER:PTHR11772	PANTHER:PTHR11772:SF8	SMART:SM01172	SUPFAM:SSF56235
UniParc:UPI0002109243	ArrayExpress:VIT_14s0036g00050	EnsemblPlantsGene:VIT_14s0036g00050	EnsemblPlants:VIT_14s0036g00050.t01	RefSeq:XP_002266887	RefSeq:XP_002266887.1

Description

No Description!

Coordinates

chr14:-:9423461..9426586

Molecular Weight (calculated)

25089.9 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.169

Length

224 amino acids

Sequence
(BLAST)

001: MRLLVTGRWH WINFDFPIKG TILKTMSQID SQVLKSLIDP VKLFAVVDDI FCLFQGHIEN VALLKQQYGL NKTTNEVIIV IEAYRTLRDR GPYPADQVVR
101: DLHGKFAFVL YDSSNRTAFL AADADESVPF FWGVDSEGHL VLSDDEETVK KGCGKSFAPF PKGCFFTTSG GLRSFEHPLN ELRAEPRVDS SSQMCGANFK
201: VDVEAKKESG MARVGSAANW STHY

Best Arabidopsis Sequence Match ( AT5G43830.1 )
(BLAST)

001: MLAVFEKTVA NSPEALQSPH SSESAFALKD GSLATHFASV NPNSVTLNFG SSGFVAYSLD NPDPRVPRLF AVVDDIFCLF QGHIENLPFL KQQYGLNKIT
101: NEAIIVIEAY RTLRDRGPYP VDKVVRDFHG KFAFILFDSV KKTVFAAADA DGSVPFFWGT DAEGHLVFSD NTEMVKKGCA KSYGPFPKGC FFTSSGGLRS
201: FEHPKNELKP VPRVDSSGDV CGATFKVDAE TKREGTKMPR VDSSQNWAGH I

Arabidopsis Description

Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9FG81]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.