CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 5
cytosol 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH39040
KRH41871
KRH48661
KRH60559

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G19140.1	KRH39040	AT3G17840.1	15618630
AT5G19140.1	KRH41871	AT3G17840.1	15618630
AT5G19140.1	KRH48661	AT3G17840.1	15618630
AT5G19140.1	KRH60559	AT3G17840.1	15618630

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51038	Soybean	plastid	97.03	97.45
KRH20897	Soybean	nucleus	84.75	84.75
Bra023707.1-P	Field mustard	cytosol	58.47	82.14
PGSC0003DMT400023208	Potato	plastid	81.36	81.36
CDY59022	Canola	cytosol	80.51	81.2
Solyc01g079880.2.1	Tomato	plastid	80.93	80.93
AT5G19140.1	Thale cress	plastid	80.08	80.77
CDY02581	Canola	cytosol	80.08	80.77
CDX88900	Canola	cytosol	79.66	80.34
CDY47200	Canola	cytosol	79.66	80.34
CDX92551	Canola	cytosol	79.66	79.66
CDY13981	Canola	cytosol	79.66	79.66
Bra002216.1-P	Field mustard	cytosol	79.24	79.24
Solyc06g054370.1.1	Tomato	cytosol, plastid	64.83	75.0
CDY59012	Canola	cytosol	79.66	74.31
VIT_05s0020g02770.t01	Wine grape	cytosol, plastid	82.2	71.59
TraesCS5A01G134000.1	Wheat	golgi	69.49	69.49
TraesCS5D01G139300.1	Wheat	golgi, unclear	69.07	69.07
TraesCS5B01G131500.1	Wheat	golgi	69.07	69.07
KRH11390	Soybean	nucleus	85.17	68.6
HORVU5Hr1G040970.1	Barley	cytosol	68.22	68.22
GSMUA_Achr8P00370_001	Banana	cytosol	67.37	67.37
Os12t0145100-01	Rice	cytosol, plastid	67.8	67.23
Os11t0147800-01	Rice	cytosol	67.37	67.09
Zm00001d023376_P002	Maize	extracellular	66.1	65.55
EES09256	Sorghum	cytosol	65.68	65.13
GSMUA_Achr8P08600_001	Banana	cytosol	64.83	64.83
KXG22952	Sorghum	cytosol, plastid	65.25	62.86
KRH38367	Soybean	extracellular	28.81	56.2
GSMUA_Achr11P...	Banana	cytosol	49.58	50.65
KRH21458	Soybean	cytosol	27.54	50.39
KRH35440	Soybean	cytosol, nucleus	44.49	42.0
Zm00001d052493_P001	Maize	plastid	64.41	41.99
KRG91376	Soybean	cytosol, nucleus	44.07	41.6
KRH22129	Soybean	nucleus	44.49	41.34
KRH27213	Soybean	endoplasmic reticulum	44.07	40.94
KRH26075	Soybean	endoplasmic reticulum	42.37	39.37
KRH21498	Soybean	cytosol	40.68	38.25
KRH10823	Soybean	cytosol	40.68	38.25
KRH63496	Soybean	cytosol	30.93	38.02
KRH10843	Soybean	nucleus	39.41	37.05
KRH33539	Soybean	cytosol	25.0	36.65
KRH20474	Soybean	nucleus	39.41	36.19
KRH10856	Soybean	cytosol	38.14	35.43
CDY32292	Canola	plasma membrane	32.2	34.39
KRG89645	Soybean	cytosol	27.97	34.02
CDX80239	Canola	vacuole	31.36	31.9
KRH50016	Soybean	cytosol, nucleus, plastid	39.41	29.62

Protein Annotations

EMBL:ACUP02010293	EnsemblPlants:KRH02111	EnsemblPlantsGene:GLYMA_17G016300	EntrezGene:100811383	Gene3D:3.60.20.10	InterPro:DUF3700
InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PANTHER:PTHR11772	PANTHER:PTHR11772:SF18	PFAM:PF12481	ProteinID:KRH02111
ProteinID:KRH02111.1	SMART:SM01172	SUPFAM:SSF56235	UniParc:UPI000233EDB6	UniProt:I1MR83	MapMan:35.1

Description

hypothetical protein

Coordinates

chr17:-:1207437..1211290

Molecular Weight (calculated)

25540.3 Da

IEP (calculated)

5.328

GRAVY (calculated)

-0.030

Length

236 amino acids

Sequence
(BLAST)

001: MLGVFSSSIV SPPEELVAAG SRTPSPKMTA AALRKWFEEK NPSAVSVEVG EHVQLAYTHQ NESPFQPRSF AVKDEVFCLF EGALDNLGNL RQQYGLAKST
101: NEVLLVIEAY KALRDRAPYP ANHVVGHLSG SFAFIVFDKS TSTLFVASDQ YGKVPLYWGI TADGYVAFAD DAELLKGACG KSLASFPQGC FYSTAVGGLM
201: CYENPKNKIT AVPANEEEIW GATFKVEGPA VVVARQ

Best Arabidopsis Sequence Match ( AT5G19140.1 )
(BLAST)

001: MLGIFSGAIV SPPEELVAAG SRTPSPKTTG STLVNRFVEK NPSAVSVQVG DYVQLAYSHH NESPLRPRSF GAKDEIFCLF QGSLDNLGSL KQQYGLAKNA
101: NEVLLVIEAY KTLRDRAPYP ANHVVAHLSG DFAFVVFDKS TSTLFVASDQ VGKVPLYWGI TADGYVAFAD DVDLLKGACG KSLASFPQGC YYSTALGGLR
201: SFENPKNKIT AVPANEGEIW GATFKVEGAT VLAD

Arabidopsis Description

ATAILP1Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q94BR2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.