Factsheet for PGSC0003DMT400023208

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400036789
PGSC0003DMT400074103

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G19140.1	PGSC0003DMT400036789	AT3G17840.1	15618630
AT5G19140.1	PGSC0003DMT400074103	AT3G17840.1	15618630

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g079880.2.1	Tomato	plastid	98.31	98.31
KRH20897	Soybean	nucleus	82.63	82.63
KRH02111	Soybean	cytosol	81.36	81.36
KRH51038	Soybean	plastid	80.93	81.28
Bra023707.1-P	Field mustard	cytosol	57.63	80.95
AT5G19140.1	Thale cress	plastid	79.66	80.34
CDY47200	Canola	cytosol	78.81	79.49
CDY02581	Canola	cytosol	78.39	79.06
CDX92551	Canola	cytosol	78.39	78.39
CDY13981	Canola	cytosol	78.39	78.39
Bra002216.1-P	Field mustard	cytosol	77.97	77.97
CDX88900	Canola	cytosol	77.12	77.78
CDY59022	Canola	cytosol	76.69	77.35
CDY59012	Canola	cytosol	77.97	72.73
VIT_05s0020g02770.t01	Wine grape	cytosol, plastid	80.08	69.74
TraesCS5A01G134000.1	Wheat	golgi	67.8	67.8
TraesCS5B01G131500.1	Wheat	golgi	67.37	67.37
GSMUA_Achr8P00370_001	Banana	cytosol	67.37	67.37
GSMUA_Achr8P08600_001	Banana	cytosol	67.37	67.37
TraesCS5D01G139300.1	Wheat	golgi, unclear	67.37	67.37
KRH11390	Soybean	nucleus	83.05	66.89
Os11t0147800-01	Rice	cytosol	66.95	66.67
HORVU5Hr1G040970.1	Barley	cytosol	66.53	66.53
Os12t0145100-01	Rice	cytosol, plastid	66.53	65.97
EES09256	Sorghum	cytosol	63.98	63.45
Zm00001d023376_P002	Maize	extracellular	63.14	62.6
KXG22952	Sorghum	cytosol, plastid	62.29	60.0
KRH38367	Soybean	extracellular	27.97	54.55
GSMUA_Achr11P...	Banana	cytosol	48.31	49.35
Zm00001d052493_P001	Maize	plastid	61.86	40.33
PGSC0003DMT400077577	Potato	cytosol	41.53	39.04
PGSC0003DMT400033379	Potato	cytosol	41.53	38.74
PGSC0003DMT400057654	Potato	cytosol	39.41	37.5
PGSC0003DMT400057793	Potato	cytosol	39.83	36.86
CDY32292	Canola	plasma membrane	31.36	33.48
CDX80239	Canola	vacuole	30.51	31.03

Protein Annotations

EnsemblPlants:PGSC0003DMT400023208	EnsemblPlantsGene:PGSC0003DMG400008988	EntrezGene:102586714	Gene3D:3.60.20.10	InterPro:DUF3700	InterPro:IPR029055
InterPro:Ntn_hydrolases_N	PANTHER:PTHR11772	PANTHER:PTHR11772:SF18	PFAM:PF12481	PGSC:PGSC0003DMG400008988	RefSeq:XP_006349236.1
SMART:SM01172	SUPFAM:SSF56235	UniParc:UPI000294CF25	UniProt:M1AHY9	MapMan:35.1	:

Description

Aluminum-induced protein [Source:PGSC_GENE;Acc:PGSC0003DMG400008988]

Coordinates

chr1:+:61961304..61965841

Molecular Weight (calculated)

25350.1 Da

IEP (calculated)

5.043

GRAVY (calculated)

0.056

Length

236 amino acids

Sequence
(BLAST)

001: MLGVFSSSIV SPPEELVAAG SRTPSPKITS DALVNRFVQR NSSAISMQIG DFVQLAYSHS NESAVLPRSF AVKDDIFCLF EGSLDNLGSL RQQYGLAKSA
101: NEVMLVIEAY KALRDRAPYP PNHVVGHLEG NFAFIVFDKS TSTLFVATDQ VGKVPLYWGI TADGYVAFAN DADLLKGACG KSLASFPQGC FYSTTVGGLR
201: SYENPKNKIT AVPATEEEIW GAKFMVEGSA VVAATE

Best Arabidopsis Sequence Match ( AT5G19140.1 )
(BLAST)

001: MLGIFSGAIV SPPEELVAAG SRTPSPKTTG STLVNRFVEK NPSAVSVQVG DYVQLAYSHH NESPLRPRSF GAKDEIFCLF QGSLDNLGSL KQQYGLAKNA
101: NEVLLVIEAY KTLRDRAPYP ANHVVAHLSG DFAFVVFDKS TSTLFVASDQ VGKVPLYWGI TADGYVAFAD DVDLLKGACG KSLASFPQGC YYSTALGGLR
201: SFENPKNKIT AVPANEGEIW GATFKVEGAT VLAD

Arabidopsis Description

ATAILP1Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q94BR2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.