Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g078380.2.1 | Tomato | extracellular, nucleus | 96.77 | 94.86 |
| VIT_10s0597g00010.t01 | Wine grape | cytosol | 43.15 | 70.86 |
| KRH21458 | Soybean | cytosol | 36.69 | 70.54 |
| KRH10856 | Soybean | cytosol | 65.32 | 63.78 |
| PGSC0003DMT400033379 | Potato | cytosol | 45.56 | 44.66 |
| PGSC0003DMT400077577 | Potato | cytosol | 45.16 | 44.62 |
| PGSC0003DMT400023208 | Potato | plastid | 37.5 | 39.41 |
| PGSC0003DMT400057793 | Potato | cytosol | 39.92 | 38.82 |
Protein Annotations
| EntrezGene:102596316 | Gene3D:3.60.20.10 | MapMan:35.1 | ProteinID:ABA40457 | ProteinID:ABA40457.1 | ProteinID:ABB29935 |
| ProteinID:ABB29935.1 | EMBL:DQ191656 | EMBL:DQ235178 | InterPro:DUF3700 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N |
| PFAM:PF12481 | EnsemblPlantsGene:PGSC0003DMG400022388 | PGSC:PGSC0003DMG400022388 | EnsemblPlants:PGSC0003DMT400057654 | PANTHER:PTHR11772 | PANTHER:PTHR11772:SF19 |
| UniProt:Q3HVL7 | SMART:SM01172 | SUPFAM:SSF56235 | UniParc:UPI00005BA44F | RefSeq:XP_006347054.1 | SEG:seg |
Description
TSJT1 [Source:PGSC_GENE;Acc:PGSC0003DMG400022388]
Coordinates
chr2:-:34077771..34079021
Molecular Weight (calculated)
27676.7 Da
IEP (calculated)
5.156
GRAVY (calculated)
-0.273
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAVFEQSIG KPPSELSTQK KEAKTEEEIA ESFKSWKPDS TFYHLSNGNF MAFSHENENP LHPRSIVVMD DIFCIFSGGL DNTFDLRKHY GLSRQATEAM
101: IMVEAYKVLR DRAPYPPDQV IKELEGKFAF ILFDSKASTL FLARDRDGSV PLHWGIATDG SLVCSDDSEF IQASCGKLYT PFPPGCIFIS DTGLISFDHP
201: MHKVKGIARE DDEGNVNAVI FQVDLYTKLH SIPRRGSAAN WAGATTVE
101: IMVEAYKVLR DRAPYPPDQV IKELEGKFAF ILFDSKASTL FLARDRDGSV PLHWGIATDG SLVCSDDSEF IQASCGKLYT PFPPGCIFIS DTGLISFDHP
201: MHKVKGIARE DDEGNVNAVI FQVDLYTKLH SIPRRGSAAN WAGATTVE
001: MLAIFHEAFA HPPEELNSPA SEKCSKQPKL PEETLNDFLL RYPLNTFSMS FGQAAVLAYV RPSASFSIHQ RLFCGFDDIY CLFFGSLNNL CQLNKQYGLT
101: KTTNEAMFVI EAYRTLRDRG PYPADQVVKD LDGSFSFVVY DSKAGSVFTA LGSDGGVKLY WGIAADGSVV ISDDLDVIKE GCAKSFAPFP TGCMFHSEGG
201: LMSFEHPMNK IKAMPRVDSE GVLCGANFKV DVYNRVNSIP RRGSEANWSL
101: KTTNEAMFVI EAYRTLRDRG PYPADQVVKD LDGSFSFVVY DSKAGSVFTA LGSDGGVKLY WGIAADGSVV ISDDLDVIKE GCAKSFAPFP TGCMFHSEGG
201: LMSFEHPMNK IKAMPRVDSE GVLCGANFKV DVYNRVNSIP RRGSEANWSL
Arabidopsis Description
AT4g27450/F27G19_50 [Source:UniProtKB/TrEMBL;Acc:Q93V62]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.