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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • plastid 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:nucleus, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400009386
PGSC0003DMT400014486
PGSC0003DMT400023208
PGSC0003DMT400058024
PGSC0003DMT400059103

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48480.1 PGSC0003DMT400014486 AT3G17950.1 15618630
AT1G48480.1 PGSC0003DMT400059103 AT5G05190.1 15618630
AT3G17840.1 PGSC0003DMT400014486 AT3G17950.1 15618630
AT3G17840.1 PGSC0003DMT400009386 AT3G51310.1 15618630
AT3G17840.1 PGSC0003DMT400058024 AT3G51310.1 15618630
AT3G17840.1 PGSC0003DMT400059103 AT5G05190.1 15618630
AT3G17840.1 PGSC0003DMT400023208 AT5G19140.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g068910.2.1 Tomato plasma membrane 91.98 94.01
PGSC0003DMT400036789 Potato cytosol 37.19 75.08
KRH41871 Soybean endoplasmic reticulum 63.12 63.02
KRH60559 Soybean endoplasmic reticulum 63.27 62.5
VIT_17s0000g02010.t01 Wine grape plasma membrane 63.73 61.46
Os03t0712400-02 Rice plasma membrane 20.83 60.0
CDY61284 Canola plasma membrane 58.02 59.49
KRH48661 Soybean nucleus 62.65 59.36
Bra021277.1-P Field mustard plasma membrane 57.56 59.02
CDY67567 Canola plasma membrane 53.09 59.01
PGSC0003DMT400040459 Potato plasma membrane 58.8 58.89
CDX92167 Canola plasma membrane 56.48 58.65
AT3G17840.1 Thale cress plasma membrane 58.02 58.11
CDX95816 Canola plasma membrane 52.78 57.97
AT1G48480.1 Thale cress plasma membrane 58.49 57.86
Bra022250.1-P Field mustard plasma membrane 56.33 57.84
Bra014140.1-P Field mustard plasma membrane 56.64 57.52
GSMUA_Achr2P21610_001 Banana plasma membrane 53.4 57.19
CDY41827 Canola plasma membrane 56.79 56.88
CDX77309 Canola plasma membrane 56.64 56.81
KRH39040 Soybean plasma membrane 56.94 56.42
GSMUA_Achr10P... Banana plasma membrane 49.23 55.38
EER95247 Sorghum plasma membrane 57.1 54.9
Zm00001d048053_P001 Maize plasma membrane 56.64 54.86
GSMUA_Achr3P02160_001 Banana plasma membrane 40.59 54.68
Os03t0223000-02 Rice plasma membrane 56.79 54.52
GSMUA_Achr3P07440_001 Banana plasma membrane 43.36 54.25
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 47.07 54.17
Zm00001d048054_P002 Maize mitochondrion, plasma membrane 56.17 54.17
GSMUA_Achr8P23000_001 Banana plasma membrane 46.14 54.17
TraesCS4D01G241100.1 Wheat plasma membrane 55.71 53.64
TraesCS4A01G064200.1 Wheat plasma membrane 55.56 52.79
GSMUA_Achr9P15690_001 Banana plasma membrane 45.52 52.68
GSMUA_Achr7P11160_001 Banana plasma membrane 42.75 51.87
TraesCS4B01G241500.1 Wheat plasma membrane 50.31 51.75
HORVU4Hr1G007550.1 Barley plasma membrane 53.24 51.65
TraesCS4D01G046900.1 Wheat plasma membrane 53.09 51.27
TraesCS4B01G047100.1 Wheat plasma membrane 53.24 51.11
TraesCS4A01G267300.1 Wheat plasma membrane 52.78 50.82
EER90996 Sorghum plasma membrane 53.4 49.71
Zm00001d033745_P001 Maize plasma membrane 53.09 49.57
PGSC0003DMT400008826 Potato plasma membrane 46.14 49.5
Zm00001d013430_P001 Maize mitochondrion 52.93 47.38
PGSC0003DMT400039213 Potato plasma membrane 47.53 46.74
TraesCS2B01G344900.1 Wheat plasma membrane 47.53 46.18
Os04t0463000-01 Rice plasma membrane 47.53 46.04
TraesCS2D01G325900.1 Wheat plasma membrane 47.53 46.04
TraesCS2A01G337000.1 Wheat plasma membrane 47.38 45.89
HORVU4Hr1G066900.1 Barley plasma membrane 37.81 45.71
PGSC0003DMT400078299 Potato plasma membrane 44.29 45.63
KXG26481 Sorghum plasma membrane 47.22 45.54
PGSC0003DMT400013468 Potato plasma membrane 44.44 45.35
PGSC0003DMT400046218 Potato plasma membrane 45.06 44.79
Zm00001d003399_P001 Maize mitochondrion, plasma membrane 46.3 44.31
HORVU7Hr1G043470.2 Barley plasma membrane 43.52 44.06
Zm00001d020403_P001 Maize plasma membrane 43.52 43.99
TraesCS5B01G202900.1 Wheat plasma membrane 43.83 43.49
TraesCS7D01G216400.1 Wheat plasma membrane 42.9 43.37
TraesCS5D01G210800.1 Wheat plasma membrane 43.36 43.36
TraesCS7B01G121600.1 Wheat plasma membrane 42.59 43.06
TraesCS7A01G214300.1 Wheat plasma membrane 42.59 43.06
TraesCS5A01G205500.1 Wheat plasma membrane 43.06 42.86
HORVU2Hr1G080770.4 Barley mitochondrion, plasma membrane, plastid 40.59 42.83
PGSC0003DMT400070937 Potato plasma membrane 38.89 42.57
HORVU0Hr1G012920.2 Barley cytosol 33.49 42.55
Os09t0400500-01 Rice plasma membrane 42.44 42.44
KXG35590 Sorghum plasma membrane 42.75 42.42
EES15012 Sorghum plasma membrane 42.44 41.98
PGSC0003DMT400037779 Potato plasma membrane 43.36 41.75
PGSC0003DMT400032061 Potato plasma membrane 41.05 41.43
PGSC0003DMT400023418 Potato plasma membrane 39.66 41.12
Zm00001d032244_P001 Maize plasma membrane 42.28 40.83
Os08t0427600-00 Rice golgi, plasma membrane 27.93 40.4
Zm00001d050355_P001 Maize plasma membrane 41.98 39.14
PGSC0003DMT400006944 Potato plasma membrane 40.28 38.61
PGSC0003DMT400050673 Potato plasma membrane 34.72 35.38
PGSC0003DMT400020520 Potato plasma membrane 34.41 33.23
PGSC0003DMT400025493 Potato plasma membrane 31.33 30.53
PGSC0003DMT400068804 Potato plasma membrane 33.8 26.97
Protein Annotations
Gene3D:1.10.510.10EntrezGene:102588664MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
UniProt:M1CT55PFAM:PF00069PFAM:PF08263PFAM:PF13855EnsemblPlantsGene:PGSC0003DMG400028801PGSC:PGSC0003DMG400028801
EnsemblPlants:PGSC0003DMT400074103ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF19InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000296B0C9
RefSeq:XP_006365414.1SEG:seg::::
Description
ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028801]
Coordinates
chr6:+:50601780..50605313
Molecular Weight (calculated)
70828.1 Da
IEP (calculated)
7.798
GRAVY (calculated)
-0.079
Length
648 amino acids
Sequence
(BLAST)
001: MVLLIIFIIH VFMFVTASSD LSSDRAALLA FRSAVGGRTF LWNTTSTSPC NWAGVQCENN RVTVLRLPAS ALSGTLPVNT ISNLTRLRTL SLRLNRLSGP
101: LPSDLSNCVE LRNIYLQGNF FTGAVSSSFS GLHSLVRLNL AENNFSGEIP SGFNSLIRLR TFLLEKNQFS GFMPELKFFP NLEQFNVSFN RLNGSIPKSL
201: EVMPVSSFTG NSLCGKPINV CPGSKTQPAI ATDGIEIGNS NNKKKKLSGG AISGIVIGSV AGFFILLLIL FVLGRMKTGD KTRSLDVETI KSPETEVPGE
301: KQIEKPDNGG VNNGNSVAVA APAAAVLNSG EENWGENGVR KKLVFFGDYY KAFELEDLLR ASAEVLGKGT FGTAYKAVLE IGTIVAVKRL KDVAISEREC
401: KEKIEAVGAM NHENLVPLRA YYFSREEKLL VFDYMPMGSL SALLHGSKGA GRTPLNWEIR SNIALGIARG IEYLHSQGPD VSHGNIKSSN VLLTKSYEAR
501: VSDFGLANLV GSPSSPTRVV GYRAPEVTDP RKVSQKADVY NFGVLLLELL TGKAPSHALL NEEGVDLPRW VQSVVREEWP SEVFDIELLR YQTAEEEMVQ
601: LLQLAINCTA QYPDKRPSMA EISKQIEELR RPTSHDKQEL SDLANATE
Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.