Factsheet for PGSC0003DMT400020520

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g078590.2.1	Tomato	plasma membrane	95.38	95.81
CDX71536	Canola	cytosol	29.51	67.12
CDY22372	Canola	cytosol	29.21	66.44
Bra033656.1-P	Field mustard	cytosol	29.06	66.1
VIT_18s0001g10070.t01	Wine grape	plasma membrane	62.0	62.84
AT5G43020.1	Thale cress	plasma membrane	54.99	55.16
GSMUA_Achr4P09880_001	Banana	plasma membrane	48.29	53.64
PGSC0003DMT400025493	Potato	plasma membrane	52.16	52.63
KRH61335	Soybean	plasma membrane	55.74	51.37
GSMUA_Achr7P20790_001	Banana	plasma membrane	43.67	49.91
KRH52034	Soybean	cytosol, plasma membrane, plastid	38.3	49.33
CDX71537	Canola	extracellular	20.86	49.12
GSMUA_Achr10P...	Banana	golgi, plasma membrane	45.31	47.28
GSMUA_Achr9P25250_001	Banana	plastid	43.67	45.36
Zm00001d002068_P001	Maize	plasma membrane	45.75	43.79
KXG27266	Sorghum	plasma membrane	45.6	43.65
TraesCS2D01G513900.1	Wheat	plasma membrane	45.45	43.57
TraesCS2B01G540400.2	Wheat	plasma membrane	45.45	43.57
HORVU2Hr1G113540.1	Barley	plastid	39.05	43.09
TraesCS2A01G512500.1	Wheat	plasma membrane	45.31	43.06
Os04t0649700-01	Rice	plasma membrane	45.16	42.68
PGSC0003DMT400036789	Potato	cytosol	18.48	38.63
PGSC0003DMT400013468	Potato	plasma membrane	33.68	35.59
PGSC0003DMT400068804	Potato	plasma membrane	42.18	34.85
PGSC0003DMT400078299	Potato	plasma membrane	32.64	34.82
PGSC0003DMT400039213	Potato	plasma membrane	33.83	34.45
PGSC0003DMT400074103	Potato	plasma membrane	33.23	34.41
PGSC0003DMT400006944	Potato	plasma membrane	34.58	34.32
PGSC0003DMT400037779	Potato	plasma membrane	34.28	34.18
PGSC0003DMT400070937	Potato	plasma membrane	30.1	34.12
PGSC0003DMT400046218	Potato	plasma membrane	33.08	34.05
PGSC0003DMT400040459	Potato	plasma membrane	31.89	33.08
PGSC0003DMT400023418	Potato	plasma membrane	30.7	32.96
PGSC0003DMT400008826	Potato	plasma membrane	29.66	32.95
PGSC0003DMT400050673	Potato	plasma membrane	30.1	31.76
PGSC0003DMT400032061	Potato	plasma membrane	29.51	30.84

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102587403	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
UniProt:M1ADM0	PFAM:PF00069	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400007948	PGSC:PGSC0003DMG400007948	EnsemblPlants:PGSC0003DMT400020520
PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27008	PANTHER:PTHR27008:SF1	InterPro:Prot_kinase_dom	SUPFAM:SSF52058
SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296A13D	RefSeq:XP_006354851.1	SEG:seg

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400007948]

Coordinates

chr4:+:67833468..67836544

Molecular Weight (calculated)

74540.0 Da

IEP (calculated)

8.633

GRAVY (calculated)

-0.202

Length

671 amino acids

Sequence
(BLAST)

001: MKIQQFLLLT ILLFLSVSFH STVSLIPSDA SALLAFKYKA DLDNKLAFSA NTSSRFCKWK GIQCSEKKVI RIVIESFSLR GTFPANTLSM LDQLRVLSLQ
101: NNSLTGPIPD LSPLINLKVL FLDHNLFTGS IPASIFTLHR LKTLDLSYNN LTGSIPVAIN GLNRLYYLRL DSNRINGSIP PLNQSTLHIF NISHNALSGP
201: IPVTKTLSRF KTASFSDNKG LCGEIVHKEC RPIQPFFSPS TAASTKITPP PSKTPAELGQ NEELRQGSPL NRKENKSHKR SLLIIGVSTA CLVLLCSVIL
301: LALASKKHRN SKKLGETKKS VFDPSVSGNA EAVIRIEEDN NELEEKVKRV QQGMQQVMGK SGSLVFCAGE VHVYTLEQLM RASAELLGRG TMGTTYKAVL
401: DNRLIVCVKR LDGGRLAGTS QEEFEQHMES VGGLRHPNLV PFRAYFQARQ ERLLVYDYQP NGSLSSLIHG SKSSRAKPLH WTSCLKIAED VTQGLSYIHQ
501: AWRLVHGNLK SSNVLLGSDF EACITDYCLS ILAVPSDDDN PDSVAYQAPE IRKLNHNNHH HHRQASAKAD VYSFGVLLLE LLTGKHPSEH PYLMPDDMLH
601: WVKSTREDHD GSIGEDSKLE MLLEVAMACR VSSPEQRPTM WQVLKMIQEI KEAVVMEDSN EMDLLTGPPK S

Best Arabidopsis Sequence Match ( AT5G43020.1 )
(BLAST)

001: MLLRCNLPIS GFLLFCFLFT IVASSSSSSN HTKRVFHSHR DVSALLRFKS KADLWNKINT SSHFCQWWGV TCYGNRVVRL VIEDLYLGGR LIPDSVNKLD
101: QLRVLSLKNT SLTGPLPDFS GLVNLKSLFL DHNSFSGSFP LSVLAFHRLR TLDFSFNNLT GPIPSGLVLS DRLIYLRLDS NRFNGPVPPL NQSTLHTFNV
201: SVNNLTGAVP VTTVLLRFGI SSFLKNPNLC GEIVHKECNP RAKFFTPVTA APSPKMVLGQ IAQIGGARLS RPSQNKHSRF FVILGFISGA FILFISVACL
301: IGAVKRRRSK TEKQKGKEST AVVTFDAAET AEVAAAIEQE SEIEEKVKKL QATKSGSLVF CAGEAHVYTM DQLMTASAEL LGRGTVGTTY KALLDSRLIV
401: TVKRLDAIRL AGVGRDKFEH HMESVGALGH PNLVPLRAYF QAKEERLLIY DYLPNGSLSS LVHGTKSSRA TPLHWTSCLK IAEDVAQGLS YIHQAWQLVH
501: GNLKSSNVLL GQDFEACIAD YCLVALATNP PLTSNDGQED ADAAAYKPPE ARHKSLNYQS VKADVYSFGI LLLELLTGKQ PSKIPVLPLD EMIEWVRKVR
601: EEGEKKNGNW REDRDKFGML TEVAVACSLA SPEQRPTMWQ VLKMLQEIKE AAVMEECELV MDSANSESS

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FMI2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.