Factsheet for Solyc04g078590.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400020520	Potato	plasma membrane	95.81	95.38
CDX71536	Canola	cytosol	29.49	66.78
CDY22372	Canola	cytosol	29.49	66.78
Bra033656.1-P	Field mustard	cytosol	29.34	66.44
VIT_18s0001g10070.t01	Wine grape	plasma membrane	62.57	63.14
AT5G43020.1	Thale cress	plasma membrane	55.24	55.16
GSMUA_Achr4P09880_001	Banana	plasma membrane	48.95	54.14
KRH61335	Soybean	plasma membrane	56.89	52.2
Solyc02g093100.2.1	Tomato	plasma membrane	51.8	51.95
GSMUA_Achr7P20790_001	Banana	plasma membrane	43.71	49.74
KRH52034	Soybean	cytosol, plasma membrane, plastid	38.77	49.71
CDX71537	Canola	extracellular	20.81	48.77
GSMUA_Achr10P...	Banana	golgi, plasma membrane	45.21	46.97
GSMUA_Achr9P25250_001	Banana	plastid	43.86	45.36
TraesCS2D01G513900.1	Wheat	plasma membrane	46.26	44.14
TraesCS2B01G540400.2	Wheat	plasma membrane	46.26	44.14
Zm00001d002068_P001	Maize	plasma membrane	46.11	43.94
HORVU2Hr1G113540.1	Barley	plastid	39.97	43.91
KXG27266	Sorghum	plasma membrane	45.96	43.79
TraesCS2A01G512500.1	Wheat	plasma membrane	46.26	43.77
Os04t0649700-01	Rice	plasma membrane	45.66	42.96
Solyc04g008650.2.1	Tomato	plasma membrane	42.22	42.28
Solyc03g095490.2.1	Tomato	plastid	33.53	35.28
Solyc05g009100.2.1	Tomato	plasma membrane	34.58	34.58
Solyc06g082610.2.1	Tomato	plasma membrane	32.34	34.56
Solyc06g068910.2.1	Tomato	plasma membrane	32.78	34.54
Solyc09g030450.2.1	Tomato	plasma membrane	32.63	34.44
Solyc09g008860.2.1	Tomato	plasma membrane	34.58	34.22
Solyc03g111670.2.1	Tomato	extracellular	33.53	33.99
Solyc06g048560.1.1	Tomato	plasma membrane	29.64	33.39
Solyc11g011020.1.1	Tomato	nucleus	31.59	32.87
Solyc03g118510.2.1	Tomato	nucleus	32.48	32.83
Solyc01g067020.2.1	Tomato	plasma membrane	29.34	32.4
Solyc11g069960.1.1	Tomato	plasma membrane	29.04	30.55
Solyc08g081940.2.1	Tomato	plasma membrane	29.19	30.37

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	UniProt:K4BUU4	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF00069	PFAM:PF13855	PIRSF:PIRSF000654	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27008
PANTHER:PTHR27008:SF1	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc04g078590.2
EnsemblPlants:Solyc04g078590.2.1	TMHMM:TMhelix	UniParc:UPI0002766C1E	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:+:63274919..63277819

Molecular Weight (calculated)

74306.8 Da

IEP (calculated)

8.940

GRAVY (calculated)

-0.187

Length

668 amino acids

Sequence
(BLAST)

001: MNIQQFLLLL LFSVFFHSTV SLIPSDASAL LAFKYKADLD NKLAFSANTS FRFCKWKGIQ CSEKKVIRIV IESFSLRGTF PANTLSMLDQ LRVLSLQNNS
101: LTGPIPDLSA LFNLKVLFLD HNSFTGSIPA SIFTLHRLKT LDLSYNKLTG SIPVAIKGLN RLYYLRLDSN RINGSIPALN QSTLHVFNIS HNALSGPIPV
201: TKTLSRFKTA SFSENKGLCG EIVHKECRPI QPFFSPSTAA STKITPPPSK TPAELGQNEE LRKGSPLNRK ENKSHKRSLL IIGVSTACLV LLCSVILLAL
301: ASKKRRTSKK LGETKKSAFD PSVSGNAEAV LRIEEDNNEL EEKVKRVQQG MQQVMGKSGS LVFCAGEVQV YTLEQLMRAS AELLGRGTMG TTYKAVLDNR
401: LIVCVKRLDG GRLAGTSQEE FEQHMESVGG LRHPNLVPFR AYFQARQERL LVYDYQPNGS LFSLIHGSKS SRAKPLHWTS CLKIAEDVAQ GLSYIHQAWR
501: LVHGNLKSSN VLLGSDFEAC ITDYCLSVLA VPSDDENPDS VAYQAPEIRK LNHNNHNYHR QASAKADVYS FGVLLLELLT GKHPSEHPYL MPDDMIHWVK
601: STREDHDGSV GEDSKLEMLL EVAMACRVSS PEQRPTMWQV LKMIQEIKEA VVMEDSNEMD LLTGPLKS

Best Arabidopsis Sequence Match ( AT5G43020.1 )
(BLAST)

001: MLLRCNLPIS GFLLFCFLFT IVASSSSSSN HTKRVFHSHR DVSALLRFKS KADLWNKINT SSHFCQWWGV TCYGNRVVRL VIEDLYLGGR LIPDSVNKLD
101: QLRVLSLKNT SLTGPLPDFS GLVNLKSLFL DHNSFSGSFP LSVLAFHRLR TLDFSFNNLT GPIPSGLVLS DRLIYLRLDS NRFNGPVPPL NQSTLHTFNV
201: SVNNLTGAVP VTTVLLRFGI SSFLKNPNLC GEIVHKECNP RAKFFTPVTA APSPKMVLGQ IAQIGGARLS RPSQNKHSRF FVILGFISGA FILFISVACL
301: IGAVKRRRSK TEKQKGKEST AVVTFDAAET AEVAAAIEQE SEIEEKVKKL QATKSGSLVF CAGEAHVYTM DQLMTASAEL LGRGTVGTTY KALLDSRLIV
401: TVKRLDAIRL AGVGRDKFEH HMESVGALGH PNLVPLRAYF QAKEERLLIY DYLPNGSLSS LVHGTKSSRA TPLHWTSCLK IAEDVAQGLS YIHQAWQLVH
501: GNLKSSNVLL GQDFEACIAD YCLVALATNP PLTSNDGQED ADAAAYKPPE ARHKSLNYQS VKADVYSFGI LLLELLTGKQ PSKIPVLPLD EMIEWVRKVR
601: EEGEKKNGNW REDRDKFGML TEVAVACSLA SPEQRPTMWQ VLKMLQEIKE AAVMEECELV MDSANSESS

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FMI2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.