Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 6
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G43020.1 | Thale cress | plasma membrane | 77.89 | 33.18 |
| KRH52034 | Soybean | cytosol, plasma membrane, plastid | 46.67 | 25.53 |
| VIT_18s0001g10070.t01 | Wine grape | plasma membrane | 52.98 | 22.81 |
| PGSC0003DMT400020520 | Potato | plasma membrane | 49.12 | 20.86 |
| Solyc04g078590.2.1 | Tomato | plasma membrane | 48.77 | 20.81 |
| CDY01430 | Canola | plasma membrane | 47.02 | 19.59 |
| GSMUA_Achr4P09880_001 | Banana | plasma membrane | 41.4 | 19.54 |
| CDX81336 | Canola | plasma membrane | 42.11 | 19.26 |
| KRH61335 | Soybean | plasma membrane | 47.37 | 18.54 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane | 41.4 | 18.35 |
| CDX83117 | Canola | plasma membrane | 42.11 | 18.32 |
| CDX68581 | Canola | plasma membrane | 41.4 | 18.07 |
| GSMUA_Achr7P20790_001 | Banana | plasma membrane | 34.39 | 16.7 |
| GSMUA_Achr9P25250_001 | Banana | plastid | 36.49 | 16.1 |
| TraesCS2D01G513900.1 | Wheat | plasma membrane | 39.3 | 16.0 |
| TraesCS2B01G540400.2 | Wheat | plasma membrane | 39.3 | 16.0 |
| TraesCS2A01G512500.1 | Wheat | plasma membrane | 39.3 | 15.86 |
| CDY19325 | Canola | plasma membrane | 35.79 | 15.74 |
| CDX81508 | Canola | plasma membrane | 35.09 | 15.46 |
| CDX97916 | Canola | plasma membrane | 35.44 | 15.3 |
| CDY34130 | Canola | cytosol, plastid | 32.98 | 15.26 |
| Os04t0649700-01 | Rice | plasma membrane | 37.89 | 15.21 |
| Zm00001d002068_P001 | Maize | plasma membrane | 37.19 | 15.12 |
| CDX77054 | Canola | plasma membrane | 32.63 | 15.07 |
| CDY24545 | Canola | plasma membrane | 33.68 | 14.91 |
| KXG27266 | Sorghum | plasma membrane | 36.14 | 14.69 |
| CDY48185 | Canola | plasma membrane | 32.98 | 14.31 |
| CDY04464 | Canola | plasma membrane | 30.88 | 13.92 |
| CDY08366 | Canola | plasma membrane | 28.07 | 13.58 |
| CDX87143 | Canola | plasma membrane | 28.77 | 13.2 |
| CDY19849 | Canola | plasma membrane | 28.77 | 13.2 |
| CDX88667 | Canola | plasma membrane | 28.77 | 13.12 |
| CDY38186 | Canola | plasma membrane | 27.02 | 13.03 |
| CDY44903 | Canola | plasma membrane | 27.37 | 12.94 |
| CDX70172 | Canola | plasma membrane | 28.07 | 12.82 |
| CDX98821 | Canola | plasma membrane | 28.07 | 12.74 |
| CDY28719 | Canola | plasma membrane | 26.32 | 12.42 |
| CDX94213 | Canola | plasma membrane | 26.67 | 12.36 |
| CDX92167 | Canola | plasma membrane | 27.02 | 12.34 |
| CDY35996 | Canola | plasma membrane | 27.37 | 12.28 |
| CDY58565 | Canola | plasma membrane | 28.07 | 12.25 |
| CDY54343 | Canola | plasma membrane | 25.61 | 12.23 |
| CDX71488 | Canola | plasma membrane | 31.23 | 12.18 |
| CDY32713 | Canola | plasma membrane | 27.72 | 12.14 |
| CDX77309 | Canola | plasma membrane | 27.37 | 12.07 |
| CDY41827 | Canola | plasma membrane | 27.37 | 12.06 |
| CDY27986 | Canola | plasma membrane | 26.67 | 12.04 |
| CDY61284 | Canola | plasma membrane | 26.67 | 12.03 |
| CDY51524 | Canola | plasma membrane | 25.96 | 11.94 |
| CDY47068 | Canola | plasma membrane | 24.91 | 11.87 |
| CDX95816 | Canola | plasma membrane | 24.21 | 11.69 |
| CDX79688 | Canola | plasma membrane | 25.96 | 11.49 |
| CDY67567 | Canola | plasma membrane | 23.16 | 11.32 |
| HORVU2Hr1G113540.1 | Barley | plastid | 23.86 | 11.18 |
| CDX84553 | Canola | plasma membrane | 25.61 | 11.11 |
| CDY49655 | Canola | plasma membrane | 23.51 | 10.86 |
| CDY38103 | Canola | plasma membrane | 23.16 | 10.77 |
| CDX85498 | Canola | plasma membrane | 23.16 | 10.77 |
| CDX69441 | Canola | plasma membrane | 22.81 | 10.52 |
| CDY47625 | Canola | plasma membrane | 22.46 | 9.67 |
| CDY02808 | Canola | plastid | 2.81 | 1.9 |
| CDX71536 | Canola | cytosol | 0.7 | 0.68 |
| Bra033656.1-P | Field mustard | cytosol | 0.7 | 0.68 |
| CDY22372 | Canola | cytosol | 0.7 | 0.68 |
| CDY03526 | Canola | cytosol | 0.0 | 0.0 |
| CDY10964 | Canola | cytosol | 0.0 | 0.0 |
| CDY25569 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY35028 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX67503 | Canola | cytosol, mitochondrion | 0.0 | 0.0 |
| CDY34407 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX71537 | EnsemblPlantsGene:GSBRNA2T00148496001 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR27008 |
| PANTHER:PTHR27008:SF1 | ProteinID:CDX71537 | ProteinID:CDX71537.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52058 |
| TMHMM:TMhelix | UniParc:UPI0004EEEE5D | MapMan:35.1 | : | : | : |
Description
BnaC04g17720D
Coordinates
chrLK031793:-:2461264..2462326
Molecular Weight (calculated)
31875.3 Da
IEP (calculated)
10.350
GRAVY (calculated)
-0.032
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRWNFPISQ FLFFCFFFAA IASSSSSLNR TKPASLHRDA YSLLLFKSKA DLWNKLGFFS NKSSSFCQWW GVTCYGNKVV RLVIEDLYLG GQLAPDSVNK
101: LDQLRVLSLK NTSLTGPLPD LSGLVNLKSL FLDHNSFSGS FPLSVLELHR LRTLDFSFNN LTGPIPHGLV FSDRLIYLRL DSNRFNGAVP ALNQSSLHSF
201: NVSVNNLTGA VPVTAVLLRF GISSFLKNPN LCGEIVDKEC NARSKFFNLS PPEKAAPPPP FPHGQMADFR ETGLSRPSHV SWRRR
101: LDQLRVLSLK NTSLTGPLPD LSGLVNLKSL FLDHNSFSGS FPLSVLELHR LRTLDFSFNN LTGPIPHGLV FSDRLIYLRL DSNRFNGAVP ALNQSSLHSF
201: NVSVNNLTGA VPVTAVLLRF GISSFLKNPN LCGEIVDKEC NARSKFFNLS PPEKAAPPPP FPHGQMADFR ETGLSRPSHV SWRRR
001: MASSSSSSSS STVSFVVFAF TVFFCLVTPA RSSDVEALLS LKSSIDPSNS ISWRGTDLCN WQGVRECMNG RVSKLVLEYL NLTGSLNEKS LNQLDQLRVL
101: SFKANSLSGS IPNLSGLVNL KSVYLNDNNF SGDFPESLTS LHRLKTIFLS GNRLSGRIPS SLLRLSRLYT LNVEDNLFTG SIPPLNQTSL RYFNVSNNKL
201: SGQIPLTRAL KQFDESSFTG NVALCGDQIG SPCGISPAPS AKPTPIPKSK KSKAKLIGII AGSVAGGVLV LILLLTLLIV CWRRKRRNQA PREDRKGKGI
301: AEAEGATTAE TERDIERKDR GFSWERGEEG AVGTLVFLGT SDSGETVVRY TMEDLLKASA ETLGRGTLGS TYKAVMESGF IVTVKRLKNA RYPRMEEFKR
401: HVEILGQLKH PNLVPLRAYF QAKEERLLVY DYFPNGSLFT LIHGTRASGS GKPLHWTSCL KIAEDLASAL LYIHQNPGLT HGNLKSSNVL LGPDFESCLT
501: DYGLSTLHDP DSVEETSAVS LFYKAPECRD PRKASTQPAD VYSFGVLLLE LLTGRTPFQD LVQEYGSDIS RWVRAVREEE TESGEEPTSS GNEASEEKLQ
601: ALLSIATVCV TIQPDNRPVM REVLKMVRDA RAEAPFSSNS SEHSPGRWSD TVQSLPRDDQ VSI
101: SFKANSLSGS IPNLSGLVNL KSVYLNDNNF SGDFPESLTS LHRLKTIFLS GNRLSGRIPS SLLRLSRLYT LNVEDNLFTG SIPPLNQTSL RYFNVSNNKL
201: SGQIPLTRAL KQFDESSFTG NVALCGDQIG SPCGISPAPS AKPTPIPKSK KSKAKLIGII AGSVAGGVLV LILLLTLLIV CWRRKRRNQA PREDRKGKGI
301: AEAEGATTAE TERDIERKDR GFSWERGEEG AVGTLVFLGT SDSGETVVRY TMEDLLKASA ETLGRGTLGS TYKAVMESGF IVTVKRLKNA RYPRMEEFKR
401: HVEILGQLKH PNLVPLRAYF QAKEERLLVY DYFPNGSLFT LIHGTRASGS GKPLHWTSCL KIAEDLASAL LYIHQNPGLT HGNLKSSNVL LGPDFESCLT
501: DYGLSTLHDP DSVEETSAVS LFYKAPECRD PRKASTQPAD VYSFGVLLLE LLTGRTPFQD LVQEYGSDIS RWVRAVREEE TESGEEPTSS GNEASEEKLQ
601: ALLSIATVCV TIQPDNRPVM REVLKMVRDA RAEAPFSSNS SEHSPGRWSD TVQSLPRDDQ VSI
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q940B9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.