CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24545	Canola	plasma membrane	92.37	88.35
AT1G60630.1	Thale cress	vacuole	79.22	74.85
CDX97916	Canola	plasma membrane	72.24	67.42
CDY19325	Canola	plasma membrane	70.29	66.82
VIT_01s0010g01660.t01	Wine grape	plasma membrane	62.01	58.5
KRH29251	Soybean	plasma membrane, vacuole	59.58	56.2
KRH24246	Soybean	plasma membrane	59.9	55.32
Solyc04g008650.2.1	Tomato	plasma membrane	59.74	55.17
GSMUA_Achr1P17850_001	Banana	plasma membrane	48.05	54.31
GSMUA_Achr3P14030_001	Banana	plasma membrane	54.06	53.11
CDY22372	Canola	cytosol	24.03	50.17
CDX71536	Canola	cytosol	23.86	49.83
PGSC0003DMT400068804	Potato	plasma membrane	59.74	45.32
HORVU6Hr1G094680.2	Barley	plasma membrane	49.35	44.44
EES07820	Sorghum	plasma membrane	50.32	44.16
TraesCS6A01G417300.1	Wheat	plasma membrane	49.84	43.92
TraesCS6B01G472100.1	Wheat	plasma membrane	49.51	43.57
TraesCS6D01G402600.1	Wheat	plasma membrane	49.35	42.7
CDX81336	Canola	plasma membrane	40.58	40.13
CDX83117	Canola	plasma membrane	41.07	38.63
Zm00001d018541_P002	Maize	plasma membrane	49.51	38.51
CDY01430	Canola	plasma membrane	42.53	38.3
CDX68581	Canola	plasma membrane	40.58	38.28
CDY03526	Canola	cytosol	15.42	37.11
CDX77054	Canola	plasma membrane	36.36	36.3
CDX81508	Canola	plasma membrane	36.85	35.09
CDY48185	Canola	plasma membrane	37.18	34.86
CDY04464	Canola	plasma membrane	35.23	34.34
CDY44903	Canola	plasma membrane	33.6	34.33
CDY27986	Canola	plasma membrane	34.58	33.76
CDX79688	Canola	plasma membrane	35.23	33.7
CDX84553	Canola	plasma membrane	35.88	33.64
CDY35996	Canola	plasma membrane	34.58	33.54
CDX88667	Canola	plasma membrane	33.93	33.44
CDY67567	Canola	plasma membrane	31.33	33.1
CDX71537	Canola	extracellular	15.26	32.98
CDX70172	Canola	plasma membrane	33.28	32.85
CDX98821	Canola	plasma membrane	33.44	32.8
CDY28719	Canola	plasma membrane	32.14	32.78
CDY61284	Canola	plasma membrane	33.6	32.75
CDY51524	Canola	plasma membrane	32.95	32.74
CDX95816	Canola	plasma membrane	31.33	32.71
CDY34407	Canola	mitochondrion	18.02	32.65
CDY49655	Canola	plasma membrane	32.63	32.58
CDY25569	Canola	mitochondrion	17.86	32.54
CDY41827	Canola	plasma membrane	33.77	32.15
CDY02808	Canola	plastid	21.92	32.07
CDX92167	Canola	plasma membrane	32.47	32.05
CDX77309	Canola	plasma membrane	33.6	32.04
CDY58565	Canola	plasma membrane	33.93	32.01
CDY38103	Canola	plasma membrane	31.82	31.97
CDX85498	Canola	plasma membrane	31.82	31.97
CDY47068	Canola	plasma membrane	31.01	31.94
CDX69441	Canola	plasma membrane	31.98	31.88
CDY54343	Canola	plasma membrane	30.84	31.83
CDY35028	Canola	mitochondrion	12.18	31.78
CDY10964	Canola	cytosol	7.47	31.72
CDX94213	Canola	plasma membrane	31.49	31.54
CDY32713	Canola	plasma membrane	33.12	31.34
CDY08366	Canola	plasma membrane	29.87	31.24
CDY38186	Canola	plasma membrane	29.71	30.96
CDX87143	Canola	plasma membrane	31.01	30.76
CDY19849	Canola	plasma membrane	30.68	30.43
CDX71488	Canola	plasma membrane	35.06	29.55
CDY47625	Canola	plasma membrane	30.68	28.55
CDX67503	Canola	cytosol, mitochondrion	17.37	27.86

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078H6E1	UniProt:A0A078H6E1
EnsemblPlants:CDY34130	ProteinID:CDY34130	ProteinID:CDY34130.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00056088001	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF40	InterPro:Prot_kinase_dom
SUPFAM:SSF52058	SUPFAM:SSF56112	TMHMM:TMhelix	UniParc:UPI0004EEC6BB	SEG:seg	:

Description

BnaC01g28700DBnaC01g28700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6E1]

Coordinates

chrLK032329:-:254361..256355

Molecular Weight (calculated)

67755.2 Da

IEP (calculated)

8.853

GRAVY (calculated)

-0.201

Length

616 amino acids

Sequence
(BLAST)

001: MVSSSSCFYI LKSSIDPSNS IPWRGTDLCN WEGVKECING TRVSKLVLEN MNLTGSLDEK SMNQLDQLRV LSFKGNSLSA SVPNLSGLVN LKSLFLNDNN
101: FSGEFPESLT SLHRLKTIVL AGNRLSGQIP SSLLHLSRLY TLHLQDNLFS GSVPPLNQTT LRFFNVSNNQ LSGRIPLTQA LKQFNESSFT GNIALCGDRI
201: QNSSCTRVSS KPSAITAMPI ANKTKLTGII VGSISGGIVI LLLALLLLIR RKKLTKSKRE ECISKAVGES DRATEGDRRN NKRFSWEKGS DEEGSSVGTL
301: VFLGRGEPDV TAVRYSMDDL LKASAETLGR GTIGSTYKAV MESGFIVTVK RLKDAAGFTR MEEFKRHVEI LGRLKHPNLV PLRAYFQAKE ECLLVYDYFP
401: NGSLFSLIHG SRVSGSGKPL HWTSCLKIAE DLAMGLVYIH QNPSLVHGNL KSSNVLLGPD FESCLTDYGL RDLHDPQDTS AASLFYKAPE CRDSRKATTQ
501: PSDVYSFGVL LLELLTGKTS SFHEHGSDIS RWVRVVREAD TESGEELNSS EEKLEALLSI ATACVAIQPE KRPAMREVLK MVKDARAEAV VFSSYSSDYS
601: PGSGRIRFRA CQGRII

Best Arabidopsis Sequence Match ( AT1G60630.1 )
(BLAST)

001: MISSSSCMFF LVFAFFLISP VRSSDVEALL SLKSSIDPSN SIPWRGTDPC NWEGVKKCMK GRVSKLVLEN LNLSGSLNGK SLNQLDQLRV LSFKGNSLSG
101: SIPNLSGLVN LKSLYLNDNN FSGEFPESLT SLHRLKTVVL SRNRFSGKIP SSLLRLSRLY TFYVQDNLFS GSIPPLNQAT LRFFNVSNNQ LSGHIPPTQA
201: LNRFNESSFT DNIALCGDQI QNSCNDTTGI TSTPSAKPAI PVAKTRSRTK LIGIISGSIC GGILILLLTF LLICLLWRRK RSKSKREERR SKRVAESKEA
301: KTAETEEGTS DQKNKRFSWE KESEEGSVGT LVFLGRDITV VRYTMDDLLK ASAETLGRGT LGSTYKAVME SGFIITVKRL KDAGFPRMDE FKRHIEILGR
401: LKHPNLVPLR AYFQAKEECL LVYDYFPNGS LFSLIHGSKV SGSGKPLHWT SCLKIAEDLA MGLVYIHQNP GLTHGNLKSS NVLLGPDFES CLTDYGLSDL
501: HDPYSIEDTS AASLFYKAPE CRDLRKASTQ PADVYSFGVL LLELLTGRTS FKDLVHKYGS DISTWVRAVR EEETEVSEEL NASEEKLQAL LTIATACVAV
601: KPENRPAMRE VLKMVKDARA EAALFSFNSS DHSPGRWSDT IQSLPREDHM SI

Arabidopsis Description

Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630 [Source:UniProtKB/Swiss-Prot;Acc:Q84MA9]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.