Factsheet for TraesCS6A01G417300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G472100.1	Wheat	plasma membrane	93.99	93.86
TraesCS6D01G402600.1	Wheat	plasma membrane	95.14	93.4
HORVU6Hr1G094680.2	Barley	plasma membrane	90.84	92.84
EES07820	Sorghum	plasma membrane	71.53	71.23
Zm00001d018541_P002	Maize	plasma membrane	70.24	61.99
GSMUA_Achr3P14030_001	Banana	plasma membrane	50.07	55.82
GSMUA_Achr1P17850_001	Banana	plasma membrane	43.2	55.41
KRH29251	Soybean	plasma membrane, vacuole	48.07	51.45
VIT_01s0010g01660.t01	Wine grape	plasma membrane	47.64	51.0
KRH24246	Soybean	plasma membrane	48.64	50.97
AT1G10850.1	Thale cress	plasma membrane	47.35	49.92
CDY34130	Canola	cytosol, plastid	43.92	49.84
Bra019897.1-P	Field mustard	plasma membrane	47.07	49.7
CDX97916	Canola	plasma membrane	46.92	49.7
CDY24545	Canola	plasma membrane	45.64	49.53
Bra031492.1-P	Field mustard	plasma membrane	45.64	49.53
Solyc04g008650.2.1	Tomato	plasma membrane	47.21	49.48
AT1G60630.1	Thale cress	vacuole	45.21	48.47
CDY19325	Canola	plasma membrane	44.92	48.46
PGSC0003DMT400068804	Potato	plasma membrane	47.35	40.76
TraesCS2A01G512500.1	Wheat	plasma membrane	39.91	39.52
TraesCS3A01G217800.1	Wheat	plasma membrane, vacuole	28.76	38.43
TraesCS3A01G037200.1	Wheat	plasma membrane	35.77	37.2
TraesCS5A01G026300.1	Wheat	plasma membrane	34.91	36.36
TraesCS3A01G342300.1	Wheat	plasma membrane	32.48	35.8
TraesCS3A01G148400.1	Wheat	plasma membrane	32.05	35.33
TraesCS2A01G104100.1	Wheat	plasma membrane	32.05	35.11
TraesCS1A01G301800.2	Wheat	plasma membrane, vacuole	31.76	34.69
TraesCS4A01G133400.1	Wheat	plasma membrane	30.47	33.44
TraesCS5A01G205500.1	Wheat	plasma membrane	30.47	32.72
TraesCS3A01G250300.1	Wheat	plasma membrane	29.9	32.45
TraesCS2A01G337000.1	Wheat	plasma membrane	31.04	32.44
TraesCS4A01G267300.1	Wheat	plasma membrane	30.9	32.1
TraesCS3A01G397700.1	Wheat	plasma membrane	32.05	32.05
TraesCS4A01G064200.1	Wheat	plasma membrane	31.19	31.96
TraesCS5A01G130900.1	Wheat	plasma membrane	33.33	31.28
TraesCS7A01G214300.1	Wheat	plasma membrane	27.61	30.11

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF00069
PFAM:PF08263	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF40	InterPro:Prot_kinase_dom	SUPFAM:SSF52058
SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G417300	EnsemblPlants:TraesCS6A01G417300.1	SEG:seg

Description

No Description!

Coordinates

chr6A:+:615771928..615778014

Molecular Weight (calculated)

71812.0 Da

IEP (calculated)

8.330

GRAVY (calculated)

0.062

Length

699 amino acids

Sequence
(BLAST)

001: MKPPGALLPR HHLLPLLLLL LLYHLAAASG TDADALLALK SSLDASNRLP WHASTATTLC TAWPGVRQCD PAGRVTKLVL ENLNLTGPLT AALLSPLAEL
101: RVLSLKANAL SGPVPDGLAA ALPNLKLLYL ASNALSGPLP ASLALLHRAT VLVLSDNRLS GRIPRELARV PRLTALLLDG NLLSGPVPAL PQSTLRALDV
201: SGNRLSGQIP GVLARRFNAS AFAGNAGLCG APLAVPCVVA AAPGPMSLSP ATAAFAPLPP PGGSGGSSGR RRKAAIIAGS TVAGAVVLAL LVAAAVTASR
301: RGRGRNKRVA GDVDKGGHGT PEEQAEEDAQ QQHQQRSANA AALPPATNAA AAAGGREFSW EREGIGKLVF CGGAAEAYSL EELLRASAET LGRGEAGSTY
401: KAVMETGFIV TVKRMRCGDA GGAGGVGGGA LEFGRRAEEL GRVRHPNVVA LRAYFQAKEE RLLVYDYYPN GSLFSLVHGS RPSSKGKPLH WTSCMKIAED
501: IAAGLLHLHS SAIVHGNLKP SNVLLGPDFE SCLTDYGLVP ALHAAGADAS SASLLYRAPE TRSSSSFTAP SDVYSFGVLL LELLTGRAPF PDLLDQHGGA
601: DEVAAWVRAT REEEMSTESG GESAASGAAG PAEEKLGALV GVAAACVAAD PGARPATVEA LRMVREARAE AMSSSNSSDR SPARWSDAVI MGAPGPPTD

Best Arabidopsis Sequence Match ( AT1G10850.1 )
(BLAST)

001: MASSSSSSSS STVSFVVFAF TVFFCLVTPA RSSDVEALLS LKSSIDPSNS ISWRGTDLCN WQGVRECMNG RVSKLVLEYL NLTGSLNEKS LNQLDQLRVL
101: SFKANSLSGS IPNLSGLVNL KSVYLNDNNF SGDFPESLTS LHRLKTIFLS GNRLSGRIPS SLLRLSRLYT LNVEDNLFTG SIPPLNQTSL RYFNVSNNKL
201: SGQIPLTRAL KQFDESSFTG NVALCGDQIG SPCGISPAPS AKPTPIPKSK KSKAKLIGII AGSVAGGVLV LILLLTLLIV CWRRKRRNQA PREDRKGKGI
301: AEAEGATTAE TERDIERKDR GFSWERGEEG AVGTLVFLGT SDSGETVVRY TMEDLLKASA ETLGRGTLGS TYKAVMESGF IVTVKRLKNA RYPRMEEFKR
401: HVEILGQLKH PNLVPLRAYF QAKEERLLVY DYFPNGSLFT LIHGTRASGS GKPLHWTSCL KIAEDLASAL LYIHQNPGLT HGNLKSSNVL LGPDFESCLT
501: DYGLSTLHDP DSVEETSAVS LFYKAPECRD PRKASTQPAD VYSFGVLLLE LLTGRTPFQD LVQEYGSDIS RWVRAVREEE TESGEEPTSS GNEASEEKLQ
601: ALLSIATVCV TIQPDNRPVM REVLKMVRDA RAEAPFSSNS SEHSPGRWSD TVQSLPRDDQ VSI

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q940B9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.