Factsheet for TraesCS6D01G402600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G417300.1	Wheat	plasma membrane	93.4	95.14
TraesCS6B01G472100.1	Wheat	plasma membrane	92.98	94.57
HORVU6Hr1G094680.2	Barley	plasma membrane	88.9	92.54
EES07820	Sorghum	plasma membrane	70.22	71.23
Zm00001d018541_P002	Maize	plasma membrane	69.38	62.37
GSMUA_Achr3P14030_001	Banana	plasma membrane	49.16	55.82
GSMUA_Achr1P17850_001	Banana	plasma membrane	42.7	55.78
VIT_01s0010g01660.t01	Wine grape	plasma membrane	47.19	51.45
KRH29251	Soybean	plasma membrane, vacuole	46.77	51.0
KRH24246	Soybean	plasma membrane	47.33	50.52
Solyc04g008650.2.1	Tomato	plasma membrane	46.49	49.63
AT1G10850.1	Thale cress	plasma membrane	46.21	49.62
CDX97916	Canola	plasma membrane	45.93	49.55
Bra019897.1-P	Field mustard	plasma membrane	45.93	49.4
CDY34130	Canola	cytosol, plastid	42.7	49.35
CDY24545	Canola	plasma membrane	44.24	48.91
Bra031492.1-P	Field mustard	plasma membrane	44.24	48.91
CDY19325	Canola	plasma membrane	43.82	48.15
AT1G60630.1	Thale cress	vacuole	43.96	48.01
PGSC0003DMT400068804	Potato	plasma membrane	46.77	41.01
TraesCS2D01G513900.1	Wheat	plasma membrane	38.48	39.14
TraesCS3D01G042500.1	Wheat	plasma membrane	34.69	36.81
TraesCS3D01G234500.1	Wheat	plasma membrane	33.43	35.21
TraesCS5D01G034200.1	Wheat	plasma membrane	33.29	35.11
TraesCS3D01G156100.1	Wheat	plasma membrane	30.9	34.59
TraesCS3D01G336200.1	Wheat	plasma membrane	30.76	34.54
TraesCS2D01G103800.1	Wheat	plasma membrane	30.62	34.22
TraesCS1D01G301400.1	Wheat	vacuole	30.48	33.91
TraesCS4D01G173400.1	Wheat	plasma membrane	29.63	33.12
TraesCS5D01G210800.1	Wheat	plasma membrane	30.06	33.02
TraesCS2D01G325900.1	Wheat	plasma membrane	30.48	32.44
TraesCS4D01G046900.1	Wheat	plasma membrane	30.48	32.34
TraesCS3D01G250700.1	Wheat	plasma membrane	29.49	32.26
TraesCS3D01G391600.1	Wheat	plasma membrane	31.32	31.95
TraesCS4D01G241100.1	Wheat	plasma membrane	30.2	31.95
TraesCS5D01G138400.1	Wheat	plasma membrane	32.72	31.28
TraesCS7D01G216400.1	Wheat	plasma membrane	27.67	30.73

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF13855	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF40
InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G402600
EnsemblPlants:TraesCS6D01G402600.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:470961431..470967108

Molecular Weight (calculated)

73111.8 Da

IEP (calculated)

8.677

GRAVY (calculated)

0.062

Length

712 amino acids

Sequence
(BLAST)

001: MKPPGPLSPR HLLLLLLLYH QLFPLPATLA ATGTTATDAD ALLALKSALD ASNRLPWHPS TARTLCTAWP GVRQCDPAGR VTKLVLENLN LTGPLTAALL
101: APLSQLRVLS LKANALSGPV PDGLAAALPN LKLLYLASNA LSGPLPASLA LLHRATVLVL SGNRLSGRIP RELAGVPRLT SLLLDGNLLT GPVPALPQST
201: LRALDVSGNR LSGQIPGVLA RRFNASAFAG NAGLCGAPLA VPCVVAAAAP GPMPLSPATA AFAPLPPPGG SGGSSGRRRK AAIIAGSTVA GAVVLALLVA
301: AAVMASRRGR GRNKRVAGDV DKGGLGTPEE QAEEDAQHQQ QQQQRSGNAA LPPATNSAAA GGREFSWERE GIGKLVFCGG AAEAYSLEEL LRASAETLGR
401: GEAGSTYKAV METGFIVTVK RMRCGDAGGA GGVGGGALEF GRRAEELGRV RHPNVVALRA YFQAKEERLL VYDYYPNGSL FSLVHGSRPS SKGKPLHWTS
501: CMKIAEDIAA GLLHLHSSAI VHGNLKPSNV LLGPDFESCL TDYGLVPALH AAGADASSAS LLYRAPETRS SSMAHVCFTA ASDVYSFGVL LLELLTGRAP
601: FPDLLDQRGG GGADEVAAWV RAAREEEMST ESGGESAASG AAGPAEEKLG ALVGVAAACV AADTGARPAT AEVLRMVREA RAEAMSSSNS SDRSPARWSD
701: AVIMGAPGPP TD

Best Arabidopsis Sequence Match ( AT1G10850.1 )
(BLAST)

001: MASSSSSSSS STVSFVVFAF TVFFCLVTPA RSSDVEALLS LKSSIDPSNS ISWRGTDLCN WQGVRECMNG RVSKLVLEYL NLTGSLNEKS LNQLDQLRVL
101: SFKANSLSGS IPNLSGLVNL KSVYLNDNNF SGDFPESLTS LHRLKTIFLS GNRLSGRIPS SLLRLSRLYT LNVEDNLFTG SIPPLNQTSL RYFNVSNNKL
201: SGQIPLTRAL KQFDESSFTG NVALCGDQIG SPCGISPAPS AKPTPIPKSK KSKAKLIGII AGSVAGGVLV LILLLTLLIV CWRRKRRNQA PREDRKGKGI
301: AEAEGATTAE TERDIERKDR GFSWERGEEG AVGTLVFLGT SDSGETVVRY TMEDLLKASA ETLGRGTLGS TYKAVMESGF IVTVKRLKNA RYPRMEEFKR
401: HVEILGQLKH PNLVPLRAYF QAKEERLLVY DYFPNGSLFT LIHGTRASGS GKPLHWTSCL KIAEDLASAL LYIHQNPGLT HGNLKSSNVL LGPDFESCLT
501: DYGLSTLHDP DSVEETSAVS LFYKAPECRD PRKASTQPAD VYSFGVLLLE LLTGRTPFQD LVQEYGSDIS RWVRAVREEE TESGEEPTSS GNEASEEKLQ
601: ALLSIATVCV TIQPDNRPVM REVLKMVRDA RAEAPFSSNS SEHSPGRWSD TVQSLPRDDQ VSI

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q940B9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.