Factsheet for TraesCS3D01G042500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G319300.1
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4B01G131100.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G68400.1	TraesCS1A01G308700.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS1A01G308800.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS1B01G319300.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS1D01G308000.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS2B01G113800.2	AT2G41090.1	17360592
AT1G68400.1	TraesCS3A01G184500.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS3A01G191900.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS3A01G335000.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS3B01G219900.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS3B01G365900.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS3D01G188600.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS3D01G194500.2	AT2G41090.1	17360592
AT1G68400.1	TraesCS3D01G328300.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS4B01G131100.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS4D01G126100.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS5A01G057100.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS5A01G057200.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS5A01G139700.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS5B01G059900.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS5B01G137100.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS5D01G068000.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS5D01G068100.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS5D01G153400.1	AT2G41090.1	17360592
AT1G68400.1	TraesCS1A01G308700.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS1A01G308800.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS1B01G319300.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS1D01G308000.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS2B01G113800.2	AT5G21274.1	17360592
AT1G68400.1	TraesCS3A01G184500.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS3A01G191900.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS3A01G335000.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS3B01G219900.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS3B01G365900.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS3D01G188600.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS3D01G194500.2	AT5G21274.1	17360592
AT1G68400.1	TraesCS3D01G328300.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS4B01G131100.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS4D01G126100.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS5A01G057100.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS5A01G057200.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS5A01G139700.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS5B01G059900.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS5B01G137100.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS5D01G068000.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS5D01G068100.1	AT5G21274.1	17360592
AT1G68400.1	TraesCS5D01G153400.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G037200.1	Wheat	plasma membrane	96.27	96.13
TraesCS3B01G046700.1	Wheat	plasma membrane	95.98	95.83
Os01t0133900-00	Rice	extracellular	16.69	88.89
HORVU3Hr1G007120.2	Barley	cytosol, peroxisome	94.63	81.2
Zm00001d039967_P001	Maize	plasma membrane	79.14	80.09
EES02541	Sorghum	plasma membrane	83.31	78.73
Bra033940.1-P	Field mustard	cytosol	28.02	62.46
GSMUA_Achr11P...	Banana	plasma membrane	46.2	59.62
GSMUA_Achr8P17920_001	Banana	plasma membrane	46.65	57.33
GSMUA_Achr1P21110_001	Banana	plasma membrane	50.82	57.02
VIT_01s0011g03860.t01	Wine grape	plasma membrane	54.69	54.69
Solyc05g009100.2.1	Tomato	plasma membrane	53.65	53.89
PGSC0003DMT400037779	Potato	plasma membrane	53.65	53.49
KRH35919	Soybean	plasma membrane	52.61	52.53
CDY44903	Canola	plasma membrane	46.5	51.74
CDX81508	Canola	plasma membrane	49.48	51.31
AT1G68400.1	Thale cress	plasma membrane	50.37	50.45
KRG94239	Soybean	vacuole	46.8	48.91
KRH38161	Soybean	plasma membrane	46.94	47.87
KRG90862	Soybean	mitochondrion	43.07	43.13
TraesCS3D01G156100.1	Wheat	plasma membrane	39.05	41.2
TraesCS4D01G173400.1	Wheat	plasma membrane	39.05	41.13
TraesCS3D01G336200.1	Wheat	plasma membrane	38.3	40.54
TraesCS2D01G103800.1	Wheat	plasma membrane	38.3	40.35
TraesCS1D01G301400.1	Wheat	vacuole	38.0	39.84
TraesCS5D01G138400.1	Wheat	plasma membrane	44.11	39.73
TraesCS4D01G046900.1	Wheat	plasma membrane	39.64	39.64
TraesCS5D01G034200.1	Wheat	plasma membrane	39.79	39.56
TraesCS3D01G234500.1	Wheat	plasma membrane	39.79	39.5
TraesCS2D01G325900.1	Wheat	plasma membrane	38.75	38.86
TraesCS5D01G210800.1	Wheat	plasma membrane	37.41	38.73
TraesCS4D01G241100.1	Wheat	plasma membrane	38.15	38.04
TraesCS3D01G250700.1	Wheat	plasma membrane	36.81	37.94
TraesCS7D01G216400.1	Wheat	plasma membrane	35.62	37.29
TraesCS3D01G391600.1	Wheat	plasma membrane	38.0	36.53
TraesCS6D01G402600.1	Wheat	plasma membrane	36.81	34.69
TraesCS2D01G513900.1	Wheat	plasma membrane	35.02	33.57

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	PFscan:PS50011
PANTHER:PTHR27008	PANTHER:PTHR27008:SF44	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G042500	EnsemblPlants:TraesCS3D01G042500.1	TIGR:cd14066	SEG:seg	:

Description

No Description!

Coordinates

chr3D:-:16271951..16274067

Molecular Weight (calculated)

70118.3 Da

IEP (calculated)

8.822

GRAVY (calculated)

-0.010

Length

671 amino acids

Sequence
(BLAST)

001: MPRPSGSSTT LLLLLLAVLL VRGANAGSLE GDAAALADFR LAADRSGALA TWNASASPSP CGWRGVTCAG GRVTRLVLEG LGLSGADALP ALARLDGLRV
101: LSLKGNHLSG AVPDLSPVQG LKLLFLSRNA LSGAIPPSLG KLYRLYRLDL SSNNLSGVVP PELARLDRLL TLRLDSNRLT GGVDGIALPR LQDLNVSHNL
201: LAGRIPVAMA GFPAEAFGGN AGLCGAPLPP CKEEVQNASP CPPAAAMAAS SPSSKPPDGK GKMSRGVVAA IVAADFAVVG LVAGLLFCYF WPRLSGRRSD
301: RRHREGEKIV YSSSPYGAAG VVAAAGGTYE RGKMVFLEDA GGRRFELEEL LRASAEMLGK GGCGTAYKAV LDDGSVVAVK RLRDAAPAAA STKKDFEHHM
401: AVLGRLHHPN IVPLNAYYYA RDEKLLVYEF MRNGSLFSLL HGNRGPGRTP LDWAARMRIA AGAARGLAYI HHASRRGGLT PKLAHGNIKS TNILLDRSGE
501: ARLADCGLAQ LGTSSPAASS AGYRAPEAPA PASRPWASQK GDVYALGVVL LELLTGRCPG SELPNGGVVA ELPRWVQSVV REEWTSEVFD LELMKDKGIE
601: EEMVAMLQLA LSCAASAPDQ RPKVGYVVRM IDEVRACGDP QASSPSHGSS MDESSGVSDS PAVSEGGAAS Q

Best Arabidopsis Sequence Match ( AT1G68400.1 )
(BLAST)

001: MAKSSFFNKH LLLSLLILLQ SCLLSSSSST DSETLLNFKL TADSTGKLNS WNTTTNPCQW TGVSCNRNRV TRLVLEDINL TGSISSLTSL TSLRVLSLKH
101: NNLSGPIPNL SNLTALKLLF LSNNQFSGNF PTSITSLTRL YRLDLSFNNF SGQIPPDLTD LTHLLTLRLE SNRFSGQIPN INLSDLQDFN VSGNNFNGQI
201: PNSLSQFPES VFTQNPSLCG APLLKCTKLS SDPTKPGRPD EAKASPLNKP ETVPSSPTSI HGGDKSNNTS RISTISLIAI ILGDFIILSF VSLLLYYCFW
301: RQYAVNKKKH SKILEGEKIV YSSNPYPTST QNNNNQNQQV GDKGKMVFFE GTRRFELEDL LRASAEMLGK GGFGTAYKAV LEDGNEVAVK RLKDAVTVAG
401: KKEFEQQMEV LGRLRHTNLV SLKAYYFARE EKLLVYDYMP NGSLFWLLHG NRGPGRTPLD WTTRLKIAAG AARGLAFIHG SCKTLKLTHG DIKSTNVLLD
501: RSGNARVSDF GLSIFAPSQT VAKSNGYRAP ELIDGRKHTQ KSDVYSFGVL LLEILTGKCP NMVETGHSGG AVDLPRWVQS VVREEWTAEV FDLELMRYKD
601: IEEEMVGLLQ IAMACTAVAA DHRPKMGHVV KLIEDIRGGG SEASPCNDGI NSAVDSPCLS EDTCGGTTSQ

Arabidopsis Description

Probable leucine-rich repeat receptor-like protein kinase At1g68400 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9C5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.