Factsheet for Bra033940.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra018296.1-P
Bra033467.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G68400.1	Bra000214.1-P	AT2G41090.1	17360592
AT1G68400.1	Bra018296.1-P	AT3G51920.1	17360592
AT1G68400.1	Bra033467.1-P	AT3G51920.1	17360592
AT1G68400.1	Bra002368.1-P	AT5G21274.1	17360592
AT1G68400.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0133900-00	Rice	extracellular	23.92	57.14
CDY44903	Canola	plasma membrane	100.0	49.92
Bra019271.1-P	Field mustard	cytosol	51.83	47.42
CDX81508	Canola	plasma membrane	98.67	45.9
AT1G68400.1	Thale cress	plasma membrane	93.02	41.79
Bra027686.1-P	Field mustard	mitochondrion	43.52	38.42
Bra020377.1-P	Field mustard	plastid	53.49	38.24
Solyc05g009100.2.1	Tomato	plasma membrane	80.4	36.23
VIT_01s0011g03860.t01	Wine grape	plasma membrane	80.4	36.07
PGSC0003DMT400037779	Potato	plasma membrane	80.4	35.96
Bra033656.1-P	Field mustard	cytosol	35.22	35.93
GSMUA_Achr11P...	Banana	plasma membrane	60.13	34.81
GSMUA_Achr8P17920_001	Banana	plasma membrane	61.79	34.07
Bra028502.1-P	Field mustard	cytosol, mitochondrion	42.86	33.59
KRG94239	Soybean	vacuole	70.76	33.18
KRH38161	Soybean	plasma membrane	71.43	32.67
GSMUA_Achr1P21110_001	Banana	plasma membrane	61.13	30.77
TraesCS3B01G046700.1	Wheat	plasma membrane	63.12	28.27
TraesCS3A01G037200.1	Wheat	plasma membrane	62.79	28.12
TraesCS3D01G042500.1	Wheat	plasma membrane	62.46	28.02
Bra023075.1-P	Field mustard	plasma membrane	60.47	27.0
EES02541	Sorghum	plasma membrane	61.79	26.2
Bra012045.1-P	Field mustard	plasma membrane	54.15	25.83
Bra034311.1-P	Field mustard	plasma membrane	56.15	25.72
Bra006774.1-P	Field mustard	plasma membrane	53.82	24.92
Zm00001d039967_P001	Maize	plasma membrane	54.82	24.89
Bra040054.1-P	Field mustard	plasma membrane, plastid	52.16	24.61
Bra029075.1-P	Field mustard	plasma membrane	48.17	24.25
HORVU3Hr1G007120.2	Barley	cytosol, peroxisome	62.46	24.04
Bra009091.1-P	Field mustard	plasma membrane	49.83	24.04
Bra021408.1-P	Field mustard	plasma membrane	47.51	23.48
Bra027751.1-P	Field mustard	plasma membrane	45.51	23.46
Bra022250.1-P	Field mustard	plasma membrane	48.84	23.3
Bra021277.1-P	Field mustard	plasma membrane	48.51	23.1
Bra014140.1-P	Field mustard	plasma membrane	48.17	22.73
Bra008611.1-P	Field mustard	plasma membrane	46.51	22.69
Bra023574.1-P	Field mustard	plasma membrane	45.85	22.51
Bra040609.1-P	Field mustard	plasma membrane	45.18	21.83
Bra029997.1-P	Field mustard	plastid	34.88	21.47
Bra031492.1-P	Field mustard	plasma membrane	42.52	19.88
Bra026468.1-P	Field mustard	plasma membrane	40.2	19.48
Bra019897.1-P	Field mustard	plasma membrane	41.53	18.88
Bra013728.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.16	16.79
Bra012141.1-P	Field mustard	plasma membrane	36.21	15.94

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	EnsemblPlantsGene:Bra033940	EnsemblPlants:Bra033940.1	EnsemblPlants:Bra033940.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4EYP8
PFAM:PF00069	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27008	PANTHER:PTHR27008:SF44	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00025462C3	:	:	:

Description

AT1G68400 (E=2e-084) | leucine-rich repeat transmembrane protein kinase, putative

Coordinates

chrA02:-:10763289..10765559

Molecular Weight (calculated)

33019.7 Da

IEP (calculated)

6.403

GRAVY (calculated)

-0.250

Length

301 amino acids

Sequence
(BLAST)

001: MVFFEGTRRF ELEDLLRASA EMLGKGGFGT AYKAVLDDGN EVAVKRLKDA VNVTGKKEFE QQMEVLGRLR HSNLVSLKAY YFAREEKLLV CEYMPNGSLF
101: WLLHGNRGPG RTPLDWTTRL KIAAGAARGV AFIHNSCKTL KLTHGDIKST NVLLDGSGNA RLLDGRKPTQ KSDVYSFGVL LLEILTGKCP NLVETGHSGG
201: AMDLPRWVQS VVREEWTAEV FDLELMRYKD IEEEMVGLLQ IAMACTAATA DHRPKMGHVV KMIEEIRGGG SETSPCNDGI NSAAESSPCL SEDTCGGTTS
301: Q

Best Arabidopsis Sequence Match ( AT1G68400.1 )
(BLAST)

001: MAKSSFFNKH LLLSLLILLQ SCLLSSSSST DSETLLNFKL TADSTGKLNS WNTTTNPCQW TGVSCNRNRV TRLVLEDINL TGSISSLTSL TSLRVLSLKH
101: NNLSGPIPNL SNLTALKLLF LSNNQFSGNF PTSITSLTRL YRLDLSFNNF SGQIPPDLTD LTHLLTLRLE SNRFSGQIPN INLSDLQDFN VSGNNFNGQI
201: PNSLSQFPES VFTQNPSLCG APLLKCTKLS SDPTKPGRPD EAKASPLNKP ETVPSSPTSI HGGDKSNNTS RISTISLIAI ILGDFIILSF VSLLLYYCFW
301: RQYAVNKKKH SKILEGEKIV YSSNPYPTST QNNNNQNQQV GDKGKMVFFE GTRRFELEDL LRASAEMLGK GGFGTAYKAV LEDGNEVAVK RLKDAVTVAG
401: KKEFEQQMEV LGRLRHTNLV SLKAYYFARE EKLLVYDYMP NGSLFWLLHG NRGPGRTPLD WTTRLKIAAG AARGLAFIHG SCKTLKLTHG DIKSTNVLLD
501: RSGNARVSDF GLSIFAPSQT VAKSNGYRAP ELIDGRKHTQ KSDVYSFGVL LLEILTGKCP NMVETGHSGG AVDLPRWVQS VVREEWTAEV FDLELMRYKD
601: IEEEMVGLLQ IAMACTAVAA DHRPKMGHVV KLIEDIRGGG SEASPCNDGI NSAVDSPCLS EDTCGGTTSQ

Arabidopsis Description

Probable leucine-rich repeat receptor-like protein kinase At1g68400 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9C5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.