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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • golgi 4
  • plasma membrane 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra001691.1-P
Bra002216.1-P
Bra005847.1-P
Bra009093.1-P
Bra021286.1-P
Bra023707.1-P
Bra025258.1-P
Bra032988.1-P
Bra036818.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G17840.1 Bra001691.1-P AT3G17950.1 15618630
AT3G17840.1 Bra021286.1-P AT3G17950.1 15618630
AT3G17840.1 Bra025258.1-P AT3G27210.1 15618630
AT3G17840.1 Bra032988.1-P AT3G27210.1 15618630
AT3G17840.1 Bra036818.1-P AT3G51310.1 15618630
AT3G17840.1 Bra005847.1-P AT5G05190.1 15618630
AT3G17840.1 Bra009093.1-P AT5G05190.1 15618630
AT3G17840.1 Bra002216.1-P AT5G19140.1 15618630
AT3G17840.1 Bra023707.1-P AT5G19140.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92167 Canola plasma membrane 96.99 98.08
Bra021277.1-P Field mustard plasma membrane 84.47 84.34
AT3G17840.1 Thale cress plasma membrane 83.04 80.99
Bra014140.1-P Field mustard plasma membrane 71.79 71.0
PGSC0003DMT400036789 Potato cytosol 32.96 64.8
KRH60559 Soybean endoplasmic reticulum 61.33 58.99
KRH41871 Soybean endoplasmic reticulum 59.9 58.24
Solyc06g068910.2.1 Tomato plasma membrane 57.21 56.94
VIT_17s0000g02010.t01 Wine grape plasma membrane 60.22 56.55
PGSC0003DMT400074103 Potato plasma membrane 57.84 56.33
Solyc03g118510.2.1 Tomato nucleus 56.26 53.71
GSMUA_Achr2P21610_001 Banana plasma membrane 51.03 53.22
KRH48661 Soybean nucleus 56.89 52.49
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 46.28 51.87
KRH39040 Soybean plasma membrane 53.72 51.83
GSMUA_Achr3P07440_001 Banana plasma membrane 42.16 51.35
Os03t0712400-02 Rice plasma membrane 18.23 51.11
GSMUA_Achr10P... Banana plasma membrane 46.43 50.87
GSMUA_Achr3P02160_001 Banana plasma membrane 38.35 50.31
Bra021408.1-P Field mustard plasma membrane 48.34 50.08
GSMUA_Achr8P23000_001 Banana plasma membrane 43.74 50.0
Zm00001d048053_P001 Maize plasma membrane 52.93 49.93
Bra023574.1-P Field mustard plasma membrane 48.18 49.59
Zm00001d048054_P002 Maize mitochondrion, plasma membrane 52.77 49.55
GSMUA_Achr9P15690_001 Banana plasma membrane 43.9 49.46
GSMUA_Achr7P11160_001 Banana plasma membrane 41.84 49.44
Os03t0223000-02 Rice plasma membrane 52.77 49.33
Bra008611.1-P Field mustard plasma membrane 48.18 49.27
TraesCS4D01G241100.1 Wheat plasma membrane 52.46 49.18
EER95247 Sorghum plasma membrane 52.3 48.96
Bra033940.1-P Field mustard cytosol 23.3 48.84
Bra040609.1-P Field mustard plasma membrane 48.02 48.64
Bra019271.1-P Field mustard cytosol 25.2 48.33
HORVU4Hr1G007550.1 Barley plasma membrane 51.03 48.2
TraesCS4D01G046900.1 Wheat plasma membrane 51.19 48.14
TraesCS4A01G064200.1 Wheat plasma membrane 51.98 48.09
TraesCS4B01G047100.1 Wheat plasma membrane 51.35 48.0
TraesCS4B01G241500.1 Wheat plasma membrane 47.86 47.94
TraesCS4A01G267300.1 Wheat plasma membrane 50.87 47.7
Zm00001d033745_P001 Maize plasma membrane 51.51 46.83
EER90996 Sorghum plasma membrane 51.35 46.55
TraesCS2B01G344900.1 Wheat plasma membrane 48.34 45.73
TraesCS2D01G325900.1 Wheat plasma membrane 48.18 45.44
Os04t0463000-01 Rice plasma membrane 47.86 45.14
TraesCS2A01G337000.1 Wheat plasma membrane 47.86 45.14
Zm00001d020403_P001 Maize plasma membrane 45.8 45.09
KXG26481 Sorghum plasma membrane 47.39 44.49
Zm00001d003399_P001 Maize mitochondrion, plasma membrane 47.54 44.31
TraesCS5D01G210800.1 Wheat plasma membrane 45.48 44.29
Zm00001d013430_P001 Maize mitochondrion 50.71 44.2
HORVU7Hr1G043470.2 Barley plasma membrane 44.69 44.06
Os09t0400500-01 Rice plasma membrane 45.17 43.98
TraesCS5B01G202900.1 Wheat plasma membrane 45.48 43.95
TraesCS7A01G214300.1 Wheat plasma membrane 44.53 43.84
Bra034311.1-P Field mustard plasma membrane 45.64 43.84
Bra012045.1-P Field mustard plasma membrane 43.74 43.74
TraesCS7D01G216400.1 Wheat plasma membrane 44.37 43.68
TraesCS5A01G205500.1 Wheat plasma membrane 45.01 43.63
TraesCS7B01G121600.1 Wheat plasma membrane 44.22 43.53
KXG35590 Sorghum plasma membrane 45.01 43.49
HORVU0Hr1G012920.2 Barley cytosol 34.87 43.14
HORVU4Hr1G066900.1 Barley plasma membrane 36.45 42.91
Bra006774.1-P Field mustard plasma membrane 43.9 42.62
HORVU2Hr1G080770.4 Barley mitochondrion, plasma membrane, plastid 41.36 42.51
Bra020377.1-P Field mustard plastid 28.05 42.04
EES15012 Sorghum plasma membrane 42.95 41.37
Bra027686.1-P Field mustard mitochondrion 22.35 41.35
Bra040054.1-P Field mustard plasma membrane, plastid 41.68 41.22
Bra009091.1-P Field mustard plasma membrane 40.57 41.03
Os08t0427600-00 Rice golgi, plasma membrane 28.84 40.62
Bra027751.1-P Field mustard plasma membrane 36.77 39.73
Zm00001d032244_P001 Maize plasma membrane 42.16 39.64
Bra026468.1-P Field mustard plasma membrane 38.67 39.29
Bra023075.1-P Field mustard plasma membrane 41.68 39.02
Zm00001d050355_P001 Maize plasma membrane 42.63 38.7
Bra029075.1-P Field mustard plasma membrane 35.5 37.46
Bra033656.1-P Field mustard cytosol 16.96 36.27
Bra028502.1-P Field mustard cytosol, mitochondrion 21.71 35.68
Bra019897.1-P Field mustard plasma membrane 34.55 32.93
Bra031492.1-P Field mustard plasma membrane 33.12 32.45
Bra012141.1-P Field mustard plasma membrane 32.17 29.68
Bra029997.1-P Field mustard plastid 21.24 27.4
Bra013728.1-P Field mustard cytosol, peroxisome, plasma membrane 40.41 27.27
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10EnsemblPlantsGene:Bra022250EnsemblPlants:Bra022250.1
EnsemblPlants:Bra022250.1-PGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typ
InterPro:LRR_dom_sfInterPro:Leu-rich_rptUniProt:M4E0F3PFAM:PF00069PFAM:PF08263PFAM:PF13855
ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF19InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000254746BSEG:seg
Description
AT3G17840 (E=2e-253) RLK902 | RLK902; ATP binding / kinase/ protein serine/threonine kinase
Coordinates
chrA05:-:18828475..18830609
Molecular Weight (calculated)
68058.9 Da
IEP (calculated)
6.010
GRAVY (calculated)
-0.065
Length
631 amino acids
Sequence
(BLAST)
001: MSPLSLLLSI LLLSLPPPSL QDLSADKSAL LSLRSSLGGR TFLWNPKQTS PCNWTGVSCD SDRVTALRLP GVALSGQIPE GIFGNLTNLR TLSLRLNALT
101: GTLPLDLGSC SDLRRLYLQG NRFSGEIPEV LFSLSNLVRL DLGDNGFSGE ISSGFKNLTR LKTLYLENNK LSGPLVDMGL GLGLDQFNVS NNLLNGSIPK
201: NLQRFDSDSF LGTSLCGKPL GVCNNEGTVP SQPISVGNIP GSDGKREKGK LSGGAIAGIV IGCVVAFFVV VMVLMALFGK KRTREVDVGR TIKQLDIESP
301: GEKAAVEAAT ESGYEAAAVT GNAEVNGSGT RRKLVFFGNA TKVFELEDLL RASAEVLGKG TFGTAYKAVL DAATMVAVKR LKDVTMADRE FKEKIEVVGA
401: MDHENLVPLR AYYYSGDEKL LVYDFMPMGS LSALLHGNKG AGRSPLDWEV RSRIALGAAR GLDYLHSQDP LSSHGNVKSS NVLLTNSHDA RVSDFGLAQL
501: VGSSTATTNR VTGYRAPEVT DARRVSQKAD VYSFGVVLLE LLTGKAPSNS VMNEEGMDLA RWVHSVGREA WRSEVFESEL MSLETVVEGE MEEMLQLGIE
601: CTEPHPDKRP VMVEVVRRIQ ELRQSGLDQV L
Best Arabidopsis Sequence Match ( AT3G17840.1 )
(BLAST)
001: MRLFFTPSMS NLSIFFSILL LSLPLPSIGD LAADKSALLS FRSAVGGRTL LWDVKQTSPC NWTGVLCDGG RVTALRLPGE TLSGHIPEGI FGNLTQLRTL
101: SLRLNGLTGS LPLDLGSCSD LRRLYLQGNR FSGEIPEVLF SLSNLVRLNL AENEFSGEIS SGFKNLTRLK TLYLENNKLS GSLLDLDLSL DQFNVSNNLL
201: NGSIPKSLQK FDSDSFVGTS LCGKPLVVCS NEGTVPSQPI SVGNIPGTVE GSEEKKKRKK LSGGAIAGIV IGCVVGLSLI VMILMVLFRK KGNERTRAID
301: LATIKHHEVE IPGEKAAVEA PENRSYVNEY SPSAVKAVEV NSSGMKKLVF FGNATKVFDL EDLLRASAEV LGKGTFGTAY KAVLDAVTLV AVKRLKDVTM
401: ADREFKEKIE VVGAMDHENL VPLRAYYYSG DEKLLVYDFM PMGSLSALLH GNKGAGRPPL NWEVRSGIAL GAARGLDYLH SQDPLSSHGN VKSSNILLTN
501: SHDARVSDFG LAQLVSASST TPNRATGYRA PEVTDPRRVS QKADVYSFGV VLLELLTGKA PSNSVMNEEG MDLARWVHSV AREEWRNEVF DSELMSIETV
601: VSVEEEMAEM LQLGIDCTEQ HPDKRPVMVE VVRRIQELRQ SGADRVG
Arabidopsis Description
RLK902Probable inactive receptor kinase RLK902 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVI6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.