Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52144 | Canola | nucleus | 86.92 | 93.23 |
| Bra009093.1-P | Field mustard | nucleus | 54.74 | 63.3 |
| AT5G05190.1 | Thale cress | nucleus | 53.23 | 57.56 |
| PGSC0003DMT400059103 | Potato | nucleus | 22.41 | 15.8 |
| KRH53706 | Soybean | nucleus | 21.65 | 14.68 |
| Solyc03g095610.2.1 | Tomato | mitochondrion, nucleus | 19.25 | 14.58 |
| KRH72549 | Soybean | nucleus | 22.56 | 14.22 |
| VIT_13s0067g03220.t01 | Wine grape | mitochondrion, nucleus | 22.71 | 12.54 |
| KRH16932 | Soybean | nucleus | 21.8 | 12.38 |
| Bra007244.1-P | Field mustard | nucleus | 7.52 | 6.95 |
| Bra003240.1-P | Field mustard | nucleus | 12.03 | 5.44 |
Protein Annotations
| EnsemblPlants:Bra005847.1 | EnsemblPlants:Bra005847.1-P | EnsemblPlantsGene:Bra005847 | InterPro:Zinc_ribbon_12 | ncoils:Coil | PANTHER:PTHR31105 |
| PANTHER:PTHR31105:SF21 | PFAM:PF11331 | SEG:seg | UniParc:UPI000253FC68 | UniProt:M4CNQ9 | MapMan:35.1 |
Description
AT5G05190 (E=4e-109) | unknown protein
Coordinates
chrA03:+:908748..910916
Molecular Weight (calculated)
72679.1 Da
IEP (calculated)
4.837
GRAVY (calculated)
-1.082
Length
665 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKSGQRVR LVKCPKCLKI LQEDEDVPVY QCGGCSAILQ AKRRSTAPKT APSAGEAERA QASESSNTAP SAGETKGAQA SELPSTPPSA GEAERDQASE
101: SPNAATSGGE AEGVQASESP NAEKSGGEAE GVQASESPNA APSEGEAEGA QASEHLNTAT SAGEAEGGQA SEPPSEPETN NVSSSSGQDT VLASPSGQED
201: EKDQDGSMES TEKQLDGLEL SQGEERNEIQ LRELSLGDSD KNEEEDNSSR LKSDMKSVAG TSSGSLNDDP VMEARRTSDS SSDAFHKLEA EISPDASPIE
301: EEQQDQEDHL FQPHRDSTDD LPANKTSSAY DGSKSSSDER EDQEENQQWN ALQNIRYPQT FKEQGGSSSS TFSDKRPSGT TTHKERHQYK SLQLEGPGGR
401: LGRQGRRHVS EQLRPDVPLY PREPYARLSP SSYPSHDVFD RYSRAHSLQM PPPYEGVDHM YHNNNTRARE RGQGSRFSGE MTNHPGWYSS QMYSSYSSYS
501: ASPQRLMEQQ PEYYPRWSHE IVSDAEDHQR TRHEARLRRQ QPVAKRHIRP TAGGAPFVSC YSCSANLQLP VDFLIFKRKY HLLRCGTCTT VLRFSLQSRT
601: HLVPAVTHDI NANRSSNPEN PSSSAAQEEE EEEEIPVARG SPLHRLMGYS TVSQVFKASQ RPPSV
101: SPNAATSGGE AEGVQASESP NAEKSGGEAE GVQASESPNA APSEGEAEGA QASEHLNTAT SAGEAEGGQA SEPPSEPETN NVSSSSGQDT VLASPSGQED
201: EKDQDGSMES TEKQLDGLEL SQGEERNEIQ LRELSLGDSD KNEEEDNSSR LKSDMKSVAG TSSGSLNDDP VMEARRTSDS SSDAFHKLEA EISPDASPIE
301: EEQQDQEDHL FQPHRDSTDD LPANKTSSAY DGSKSSSDER EDQEENQQWN ALQNIRYPQT FKEQGGSSSS TFSDKRPSGT TTHKERHQYK SLQLEGPGGR
401: LGRQGRRHVS EQLRPDVPLY PREPYARLSP SSYPSHDVFD RYSRAHSLQM PPPYEGVDHM YHNNNTRARE RGQGSRFSGE MTNHPGWYSS QMYSSYSSYS
501: ASPQRLMEQQ PEYYPRWSHE IVSDAEDHQR TRHEARLRRQ QPVAKRHIRP TAGGAPFVSC YSCSANLQLP VDFLIFKRKY HLLRCGTCTT VLRFSLQSRT
601: HLVPAVTHDI NANRSSNPEN PSSSAAQEEE EEEEIPVARG SPLHRLMGYS TVSQVFKASQ RPPSV
001: MASQTGQKIR LVRCPKCLKI LQEDEDVPVY QCGGCSAILQ AKRRNIAPSS TPSAGETERA QANEPQSVPE TNNVSSSSGQ DTVLPSSPGR SVDQEYEKGR
101: NASMESTEKE LDDLELSNGD GTNEIQEQEC SLGDSEKNER EDNSRLESHM MNTVAEAAGS GSSSGSLSVD HVVAARASNP SGNSEISPDA SPVEEKQSQL
201: DILANKTPSA YDVVAARASN SSGNAEISPD ASPVEEKQSQ LDYPANKTSS AYDGSESSSD EREGQLLDDD EQWNALQKIR SGKFEMHRYP GYKEQGASSS
301: SPFSENRRNG ITTYNERHQN RSLQLEGPGG RLGRQGRRHV TEQLRPDMPF YPRESYTRGS PSHPSHDEFD RYPRAHSLQM PSYAGGMNHD FVDYMYHNNP
401: RARGQGQGSR ISGEMGRNHG GWYSGQLHNS YSSYSASPQR PMEQPEYHPR WRREIVSDVE DHQRNRHAGH HHELQTRRLR ERQRVAKRHV RPTAGGAPFV
501: SCYSCSENLQ LPVDFLIFKR KHHLLRCGTC TTVLRFSLQS RNHLVPAVTH DINANRNSNS TSESPIDKAP SKPEKLRSSV QDEELPVARG SPLHRLMGYS
601: TVSQVFKVSQ RPPSI
101: NASMESTEKE LDDLELSNGD GTNEIQEQEC SLGDSEKNER EDNSRLESHM MNTVAEAAGS GSSSGSLSVD HVVAARASNP SGNSEISPDA SPVEEKQSQL
201: DILANKTPSA YDVVAARASN SSGNAEISPD ASPVEEKQSQ LDYPANKTSS AYDGSESSSD EREGQLLDDD EQWNALQKIR SGKFEMHRYP GYKEQGASSS
301: SPFSENRRNG ITTYNERHQN RSLQLEGPGG RLGRQGRRHV TEQLRPDMPF YPRESYTRGS PSHPSHDEFD RYPRAHSLQM PSYAGGMNHD FVDYMYHNNP
401: RARGQGQGSR ISGEMGRNHG GWYSGQLHNS YSSYSASPQR PMEQPEYHPR WRREIVSDVE DHQRNRHAGH HHELQTRRLR ERQRVAKRHV RPTAGGAPFV
501: SCYSCSENLQ LPVDFLIFKR KHHLLRCGTC TTVLRFSLQS RNHLVPAVTH DINANRNSNS TSESPIDKAP SKPEKLRSSV QDEELPVARG SPLHRLMGYS
601: TVSQVFKVSQ RPPSI
Arabidopsis Description
EDR4Protein ENHANCED DISEASE RESISTANCE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.