Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16932 | Soybean | nucleus | 81.14 | 73.1 |
| KRH53706 | Soybean | nucleus | 42.18 | 45.36 |
| PGSC0003DMT400059103 | Potato | nucleus | 22.84 | 25.56 |
| CDX98822 | Canola | nucleus | 13.65 | 25.26 |
| CDX70170 | Canola | nucleus | 13.74 | 25.17 |
| Bra009093.1-P | Field mustard | nucleus | 13.65 | 25.04 |
| CDX80954 | Canola | mitochondrion, nucleus | 13.08 | 24.69 |
| Solyc03g095610.2.1 | Tomato | mitochondrion, nucleus | 20.09 | 24.15 |
| CDY52144 | Canola | nucleus | 13.84 | 23.55 |
| VIT_13s0067g03220.t01 | Wine grape | mitochondrion, nucleus | 26.45 | 23.17 |
| AT5G05190.1 | Thale cress | nucleus | 13.46 | 23.09 |
| Bra005847.1-P | Field mustard | nucleus | 14.22 | 22.56 |
| CDY27216 | Canola | nucleus | 5.97 | 14.06 |
| CDX72139 | Canola | nucleus | 6.45 | 12.3 |
| Bra007244.1-P | Field mustard | nucleus | 6.35 | 9.32 |
| CDY32014 | Canola | nucleus | 10.71 | 8.06 |
| CDX67646 | Canola | nucleus | 10.05 | 7.72 |
| Bra003240.1-P | Field mustard | nucleus | 10.71 | 7.69 |
| AT3G56410.2 | Thale cress | nucleus, plastid | 11.09 | 7.62 |
Protein Annotations
| EMBL:ACUP02001220 | EnsemblPlants:KRH72549 | EnsemblPlantsGene:GLYMA_02G219400 | EntrezGene:102666946 | InterPro:Zinc_ribbon_12 | PANTHER:PTHR31105 |
| PANTHER:PTHR31105:SF21 | PFAM:PF11331 | ProteinID:KRH72546.1 | ProteinID:KRH72547.1 | ProteinID:KRH72548.1 | ProteinID:KRH72549 |
| ProteinID:KRH72549.1 | ProteinID:KRH72550.1 | ProteinID:KRH72551.1 | SEG:seg | UniParc:UPI000294BAA4 | UniProt:K7KA24 |
| MapMan:35.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:40730226..40735968
Molecular Weight (calculated)
116372.0 Da
IEP (calculated)
4.979
GRAVY (calculated)
-0.930
Length
1055 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSGESAPKPK PRLVLCPKCW QLLPESPDYD VYKCGGCGTT LQAKKRRNRA VNSESNTHET DAAPRNALNR ESSTRETDAA PGNALNSESR MHETGAAPTN
0101: ALDTKAHDKK YSNGEQLVSY QENGFKENAT NSSSGECSLN GSGGSDQIED GECNGEQLVT SQENGFGEKS TSSSSREGSL NGNDGRDQIE DGECNAEQPL
0201: ISRENGLMAK ASSSSSEECS LNGNDGRDQI ENGECNGEQI EQLNLPDEEL GNEMDSHKLS DMRRHTVSYN GCSDEVTYFE IEALAELIAE SSVENAKNTN
0301: LQLQGEELSN GNVPLEGAVK HLISTFDKDG NDEKLAPGLQ KSEVDIAGND FEAEEELNNG NLLLEGAEKD LFSGLDREEV NNDNSALVGA NPEVDINGSN
0401: EAGSEELNNR NLLLEVTEEE LNECASDGGD PKHDQSGLVG AKSEVDNTRN ASIPQRLSTE EGRISRAYPR ELEEGTSGYH ASSKAVHHSF DCVRSVDTFD
0501: NTEVINPGFE TSGTLGGLSK SSTIQSYHAY DGSISSNDGV DEQFPNQYLD SFENTYTVAN GVSEGGSRKG KGLVNSMLRG DLETQRQSYF REGRPRIPRD
0601: NRRNLNEVSE TTRHGHAHWM RTKKDEFPLR VPHHRSGSLS GYESGSTSNQ MHDELYCSSS YRSPDSFDDP DQEKMKLLRM VYKLQEQLNR TSYLNGETNG
0701: RLSMGSHVSS YQSHDLHERR LYHSSDYPRC DGICSHGTNR CQKHNFSHVV PYLTEPTSSI HHVDHSFFPC CPQQWQCSAE LPPRDLYQHE ELCRPNQGHS
0801: CCSPCHSYPS SPQWLMTSNL PAHAHETNSY DQRHRPEVKK YFWEKPSLTR RHYRPVAGGA PFVTCHKCLK LLQLPADFLL FKRVYHQLKC GACQEVLKFS
0901: LQNRSHIVSY APNALEPPSS SSNLDDRNEV IDGSNPHSVS HADHISYSDD YGHSVGKSYS SEGDPVSAAP LHPLHDSAYD KQTVSSGTLE PITEKDKNAS
1001: RSPTTSKAPV ETDEQAVNSS NNVSSELEAH SQPKSSPLHR LMGYTSPSQV IRGIP
0101: ALDTKAHDKK YSNGEQLVSY QENGFKENAT NSSSGECSLN GSGGSDQIED GECNGEQLVT SQENGFGEKS TSSSSREGSL NGNDGRDQIE DGECNAEQPL
0201: ISRENGLMAK ASSSSSEECS LNGNDGRDQI ENGECNGEQI EQLNLPDEEL GNEMDSHKLS DMRRHTVSYN GCSDEVTYFE IEALAELIAE SSVENAKNTN
0301: LQLQGEELSN GNVPLEGAVK HLISTFDKDG NDEKLAPGLQ KSEVDIAGND FEAEEELNNG NLLLEGAEKD LFSGLDREEV NNDNSALVGA NPEVDINGSN
0401: EAGSEELNNR NLLLEVTEEE LNECASDGGD PKHDQSGLVG AKSEVDNTRN ASIPQRLSTE EGRISRAYPR ELEEGTSGYH ASSKAVHHSF DCVRSVDTFD
0501: NTEVINPGFE TSGTLGGLSK SSTIQSYHAY DGSISSNDGV DEQFPNQYLD SFENTYTVAN GVSEGGSRKG KGLVNSMLRG DLETQRQSYF REGRPRIPRD
0601: NRRNLNEVSE TTRHGHAHWM RTKKDEFPLR VPHHRSGSLS GYESGSTSNQ MHDELYCSSS YRSPDSFDDP DQEKMKLLRM VYKLQEQLNR TSYLNGETNG
0701: RLSMGSHVSS YQSHDLHERR LYHSSDYPRC DGICSHGTNR CQKHNFSHVV PYLTEPTSSI HHVDHSFFPC CPQQWQCSAE LPPRDLYQHE ELCRPNQGHS
0801: CCSPCHSYPS SPQWLMTSNL PAHAHETNSY DQRHRPEVKK YFWEKPSLTR RHYRPVAGGA PFVTCHKCLK LLQLPADFLL FKRVYHQLKC GACQEVLKFS
0901: LQNRSHIVSY APNALEPPSS SSNLDDRNEV IDGSNPHSVS HADHISYSDD YGHSVGKSYS SEGDPVSAAP LHPLHDSAYD KQTVSSGTLE PITEKDKNAS
1001: RSPTTSKAPV ETDEQAVNSS NNVSSELEAH SQPKSSPLHR LMGYTSPSQV IRGIP
001: MASQTGQKIR LVRCPKCLKI LQEDEDVPVY QCGGCSAILQ AKRRNIAPSS TPSAGETERA QANEPQSVPE TNNVSSSSGQ DTVLPSSPGR SVDQEYEKGR
101: NASMESTEKE LDDLELSNGD GTNEIQEQEC SLGDSEKNER EDNSRLESHM MNTVAEAAGS GSSSGSLSVD HVVAARASNP SGNSEISPDA SPVEEKQSQL
201: DILANKTPSA YDVVAARASN SSGNAEISPD ASPVEEKQSQ LDYPANKTSS AYDGSESSSD EREGQLLDDD EQWNALQKIR SGKFEMHRYP GYKEQGASSS
301: SPFSENRRNG ITTYNERHQN RSLQLEGPGG RLGRQGRRHV TEQLRPDMPF YPRESYTRGS PSHPSHDEFD RYPRAHSLQM PSYAGGMNHD FVDYMYHNNP
401: RARGQGQGSR ISGEMGRNHG GWYSGQLHNS YSSYSASPQR PMEQPEYHPR WRREIVSDVE DHQRNRHAGH HHELQTRRLR ERQRVAKRHV RPTAGGAPFV
501: SCYSCSENLQ LPVDFLIFKR KHHLLRCGTC TTVLRFSLQS RNHLVPAVTH DINANRNSNS TSESPIDKAP SKPEKLRSSV QDEELPVARG SPLHRLMGYS
601: TVSQVFKVSQ RPPSI
101: NASMESTEKE LDDLELSNGD GTNEIQEQEC SLGDSEKNER EDNSRLESHM MNTVAEAAGS GSSSGSLSVD HVVAARASNP SGNSEISPDA SPVEEKQSQL
201: DILANKTPSA YDVVAARASN SSGNAEISPD ASPVEEKQSQ LDYPANKTSS AYDGSESSSD EREGQLLDDD EQWNALQKIR SGKFEMHRYP GYKEQGASSS
301: SPFSENRRNG ITTYNERHQN RSLQLEGPGG RLGRQGRRHV TEQLRPDMPF YPRESYTRGS PSHPSHDEFD RYPRAHSLQM PSYAGGMNHD FVDYMYHNNP
401: RARGQGQGSR ISGEMGRNHG GWYSGQLHNS YSSYSASPQR PMEQPEYHPR WRREIVSDVE DHQRNRHAGH HHELQTRRLR ERQRVAKRHV RPTAGGAPFV
501: SCYSCSENLQ LPVDFLIFKR KHHLLRCGTC TTVLRFSLQS RNHLVPAVTH DINANRNSNS TSESPIDKAP SKPEKLRSSV QDEELPVARG SPLHRLMGYS
601: TVSQVFKVSQ RPPSI
Arabidopsis Description
EDR4Protein ENHANCED DISEASE RESISTANCE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.