Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27216 | Canola | nucleus | 59.67 | 95.76 |
| Bra003240.1-P | Field mustard | nucleus | 36.16 | 17.69 |
| Bra009093.1-P | Field mustard | nucleus | 7.37 | 9.22 |
| Bra005847.1-P | Field mustard | nucleus | 6.95 | 7.52 |
| PGSC0003DMT400059103 | Potato | nucleus | 9.04 | 6.89 |
| KRH53706 | Soybean | nucleus | 9.32 | 6.83 |
| KRH72549 | Soybean | nucleus | 9.32 | 6.35 |
| VIT_13s0067g03220.t01 | Wine grape | mitochondrion, nucleus | 10.01 | 5.98 |
| KRH16932 | Soybean | nucleus | 9.18 | 5.64 |
| Solyc03g095610.2.1 | Tomato | mitochondrion, nucleus | 6.82 | 5.58 |
Protein Annotations
Description
AT3G56410 (E=5e-033) | unknown protein
Coordinates
chrA09:-:28179869..28182368
Molecular Weight (calculated)
81734.5 Da
IEP (calculated)
4.569
GRAVY (calculated)
-0.836
Length
719 amino acids
Sequence
(BLAST)
(BLAST)
001: MMVKKKQSRS TEKKTLEPKL LPIFHSKLAS GKDMKHMIRG MSSIPVPGLS SQSRVVRCPK CHKFLQEPVD VTIYKCSGCD SILQAKSWEM ESEEGGGSKT
101: PMRSSYRKYS SRASSSPLFE RGYHSKTAYI RREWMTSATP SPSSYGYTSS PFHGSQREGW FQESSAAASP LSITKKEDTT LLDLLRFVDS RTSFAEDSAS
201: DSHHLSSSDK GSGDRVCNVS TDAVKWETFE EDMGIKEEIR SISSKFIDLT FQPQWNHKLR AQASLLGDGE ILVERMSDST ETDADRLVEP LNNKEHVCET
301: NLMSENTQEF DLGELKRQDI MGEKRGLWLN HKEDMESQNE SCYEGVYGRE DRAGLHLEEY ETNYENYYSN PFEWTTPTFH VPEYEPEEGG QARSESSSFS
401: DHEEEPWLVD YNKTKELQVV GVVVEDGPSL HFDKCGYEST TLEETLESTP KFYLHEPELL EPDNEADGSS ESSSTGSFNS HESSKLRAVF HQEEEEPQVM
501: SDSRTEMILG ALLEPNDHVI PKEREMDHEE EDDDPWLVDD CETKALKVHV MAEDGASLHL EKFENEKMLL DQRVEPKEDI FRLSLDDTVE EEWVTFDLET
601: SQEDKEVNLR QTFKQGDTEE NTPTPASASG LVLSEEEILR DHLEHFQKEN EKSRRTSEVV GLRHALYQTQ TSPLSTLPID TPIGSPRHIL MRSHMVSPLR
701: SLTNSSGSLS DVLSLPKKT
101: PMRSSYRKYS SRASSSPLFE RGYHSKTAYI RREWMTSATP SPSSYGYTSS PFHGSQREGW FQESSAAASP LSITKKEDTT LLDLLRFVDS RTSFAEDSAS
201: DSHHLSSSDK GSGDRVCNVS TDAVKWETFE EDMGIKEEIR SISSKFIDLT FQPQWNHKLR AQASLLGDGE ILVERMSDST ETDADRLVEP LNNKEHVCET
301: NLMSENTQEF DLGELKRQDI MGEKRGLWLN HKEDMESQNE SCYEGVYGRE DRAGLHLEEY ETNYENYYSN PFEWTTPTFH VPEYEPEEGG QARSESSSFS
401: DHEEEPWLVD YNKTKELQVV GVVVEDGPSL HFDKCGYEST TLEETLESTP KFYLHEPELL EPDNEADGSS ESSSTGSFNS HESSKLRAVF HQEEEEPQVM
501: SDSRTEMILG ALLEPNDHVI PKEREMDHEE EDDDPWLVDD CETKALKVHV MAEDGASLHL EKFENEKMLL DQRVEPKEDI FRLSLDDTVE EEWVTFDLET
601: SQEDKEVNLR QTFKQGDTEE NTPTPASASG LVLSEEEILR DHLEHFQKEN EKSRRTSEVV GLRHALYQTQ TSPLSTLPID TPIGSPRHIL MRSHMVSPLR
701: SLTNSSGSLS DVLSLPKKT
0001: MRTTHREYNS RPSTSVERGY HPETVYKPET SDIRREWMRR TDDFSETGDS DVFTSERSSP YNTRSNAAQW AQHEGRYADP PRVPFYPASP SPSSAYEYGY
0101: SSPFHGSYVS ASEQSYYHQQ PNQFEQYSRE GWFQESSVAS PTRFPGETSD GKYYHRSSQS QLHDLQYHNL YEPSRSETPH HSVYSERSYV PAAAPHRSTY
0201: SEHSVGISKS DTSSEKSILR NKKRYVRERN PVVKRHILPS AGGAPFATCS YCLELLQLPQ VSPQGKRQRY QVRCGSCSGV LKFSIREKAD TVLDSPSFVD
0301: YGMDFADETV TNHQDSASEG HEEINPDGSH LTCLDDDSGE TICKSNDAVI LSQKILETFE DKGIKEDIRN ISTKFLDLKL EALQPHLKPM GNRRLSEQQP
0401: TSSETIGETS KIHLEQSQEA HSEKSTEMDN NICDIEEPEY EKNEIIKPEE IVGEGSGESL EVPVNQNERM SESSEEDERV AERSVSHSEE LLYKKEYVSE
0501: TRVQSENTGD TYEFEWEETQ ETEEYEGEST LEEIGDKPQL HLDKSRYTRD SICDSSLSYG EPFEDTSVKE DTEHISNTIS DAKSATTHSP LNSLVNENQR
0601: FIGHLDQSGE ATVTISRIQE HSKYEYENLS ERQELEMTIS DRVTCKLEES RYETNETLEP SKVGEDGSLV SFEKVSEAFE TIIEGKTGEE RLVSHQMDSP
0701: NENVENSYGT LEPVYLEESG FAGERTWEGT IEDRAGLHLE EYESNYENYS RPFEWTSETA PTFRMHDYEL GTILEPDEYA DGRSESSSRG SFNDDGGSEE
0801: RVVFHESQVA IPEQSHYEYE NSSKRQELSD TVFDIARSEL QEYRYERNET LEPSKMVGDG SVVPVEKAGE TFISKKNEDS SVSHQMESQN EDMENSYGTK
0901: EPVYPEGSRC ESENSWAETM GDGAGLKLEE YNSNPFEWTS EKAAAFHLHE YERWTVPEPE EDANERSITS SRDSFNDHEN LKGIAVSHEE EPWLVDENRT
1001: EALKVGVMVE DEPSLHLTKF ENETMKLEET LEWTSERAPT FRLPEYELGE MLESDNDVDE RSEYSSKGSF NDHEIPRELL NEEDPQLVID GRTEAVQVGE
1101: MAKDTVSLHL EECGNESMKL DETFEWTSGR TLTFRRHGYE VETKLEADED ADGRSESSSR GSFNDRGSSK ERAVLHEDGS WLVDDYETKA LKVGVMAEDG
1201: SSLQLEKGEN GKMDLDETLE PRDDIFRLSL DDTLEQERMT FHLKMSQDKQ ESLRQTFKQG DAEKDSDVFS EGHEFPSKMA ELDSDTEEEI VEEQLEHLQK
1301: ENEKLSLTFE QHDHIYSTTE PSEIVGLRHA LYQTQNSPLR SPLTSPIHTP IGSPLHYLMA SQIRSPIAST MHSHIVSPLR SPINSSGSLS DVLFFSKKT
0101: SSPFHGSYVS ASEQSYYHQQ PNQFEQYSRE GWFQESSVAS PTRFPGETSD GKYYHRSSQS QLHDLQYHNL YEPSRSETPH HSVYSERSYV PAAAPHRSTY
0201: SEHSVGISKS DTSSEKSILR NKKRYVRERN PVVKRHILPS AGGAPFATCS YCLELLQLPQ VSPQGKRQRY QVRCGSCSGV LKFSIREKAD TVLDSPSFVD
0301: YGMDFADETV TNHQDSASEG HEEINPDGSH LTCLDDDSGE TICKSNDAVI LSQKILETFE DKGIKEDIRN ISTKFLDLKL EALQPHLKPM GNRRLSEQQP
0401: TSSETIGETS KIHLEQSQEA HSEKSTEMDN NICDIEEPEY EKNEIIKPEE IVGEGSGESL EVPVNQNERM SESSEEDERV AERSVSHSEE LLYKKEYVSE
0501: TRVQSENTGD TYEFEWEETQ ETEEYEGEST LEEIGDKPQL HLDKSRYTRD SICDSSLSYG EPFEDTSVKE DTEHISNTIS DAKSATTHSP LNSLVNENQR
0601: FIGHLDQSGE ATVTISRIQE HSKYEYENLS ERQELEMTIS DRVTCKLEES RYETNETLEP SKVGEDGSLV SFEKVSEAFE TIIEGKTGEE RLVSHQMDSP
0701: NENVENSYGT LEPVYLEESG FAGERTWEGT IEDRAGLHLE EYESNYENYS RPFEWTSETA PTFRMHDYEL GTILEPDEYA DGRSESSSRG SFNDDGGSEE
0801: RVVFHESQVA IPEQSHYEYE NSSKRQELSD TVFDIARSEL QEYRYERNET LEPSKMVGDG SVVPVEKAGE TFISKKNEDS SVSHQMESQN EDMENSYGTK
0901: EPVYPEGSRC ESENSWAETM GDGAGLKLEE YNSNPFEWTS EKAAAFHLHE YERWTVPEPE EDANERSITS SRDSFNDHEN LKGIAVSHEE EPWLVDENRT
1001: EALKVGVMVE DEPSLHLTKF ENETMKLEET LEWTSERAPT FRLPEYELGE MLESDNDVDE RSEYSSKGSF NDHEIPRELL NEEDPQLVID GRTEAVQVGE
1101: MAKDTVSLHL EECGNESMKL DETFEWTSGR TLTFRRHGYE VETKLEADED ADGRSESSSR GSFNDRGSSK ERAVLHEDGS WLVDDYETKA LKVGVMAEDG
1201: SSLQLEKGEN GKMDLDETLE PRDDIFRLSL DDTLEQERMT FHLKMSQDKQ ESLRQTFKQG DAEKDSDVFS EGHEFPSKMA ELDSDTEEEI VEEQLEHLQK
1301: ENEKLSLTFE QHDHIYSTTE PSEIVGLRHA LYQTQNSPLR SPLTSPIHTP IGSPLHYLMA SQIRSPIAST MHSHIVSPLR SPINSSGSLS DVLFFSKKT
Arabidopsis Description
Uncharacterized protein T5P19_60 [Source:UniProtKB/TrEMBL;Acc:Q9LXZ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.