Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007244.1-P | Field mustard | nucleus | 95.76 | 59.67 |
| CDX72139 | Canola | nucleus | 41.74 | 33.82 |
| CDX67646 | Canola | nucleus | 48.21 | 15.73 |
| CDY32014 | Canola | nucleus | 48.66 | 15.55 |
| CDX98822 | Canola | nucleus | 11.16 | 8.77 |
| CDX70170 | Canola | nucleus | 11.16 | 8.68 |
| CDX80954 | Canola | mitochondrion, nucleus | 10.49 | 8.41 |
| CDY52144 | Canola | nucleus | 10.27 | 7.42 |
| PGSC0003DMT400059103 | Potato | nucleus | 13.84 | 6.57 |
| KRH53706 | Soybean | nucleus | 13.62 | 6.22 |
| KRH72549 | Soybean | nucleus | 14.06 | 5.97 |
| Solyc03g095610.2.1 | Tomato | mitochondrion, nucleus | 10.94 | 5.58 |
| VIT_13s0067g03220.t01 | Wine grape | mitochondrion, nucleus | 14.96 | 5.56 |
| KRH16932 | Soybean | nucleus | 13.62 | 5.21 |
Protein Annotations
| EnsemblPlants:CDY27216 | EnsemblPlantsGene:GSBRNA2T00037088001 | ncoils:Coil | PANTHER:PTHR31105 | ProteinID:CDY27216 | ProteinID:CDY27216.1 |
| SEG:seg | UniParc:UPI0004EE802E | UniProt:A0A078GPF0 | MapMan:35.2 | : | : |
Description
BnaA09g35860DBnaA09g35860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPF0]
Coordinates
chrLK032201:+:193047..196423
Molecular Weight (calculated)
51355.6 Da
IEP (calculated)
4.591
GRAVY (calculated)
-0.873
Length
448 amino acids
Sequence
(BLAST)
(BLAST)
001: MMVKKKKKKQ SRSTEKKTLE PKLLPIFHSK LASGKDMKHM IRGMSSIPVP GLSSQSRVVR CPKCHNHKFL QEPVDVTIYK CSGCDSILQE TWPWLNHKED
101: MESQNESCYE GVYGREDRAG LHLEEYETNY ENYYSNPFEW TTPTFHVPEY EPEEGGQARS ESSSFSDHEE EPWLVDYNKT KELQVVGVVV EDGPSLHFDK
201: CGYESTTLEE TLESTPKFYL HEPELLEPDN EADGSWESSS TGSFNSHESS KLRAMDHEEE DDDPWLVDDC ETKALKVHVM AEDGASLHLE KFENEKMLLD
301: QRVEPREDIF RLSLDDTVEE EWVTFDLETS QEDKEVNLRQ TFKLGDTEEN TPTPASASGS MLSEEEILRD QLEHFQKENE KSRRTSEVVG LRHALYQTQT
401: SPLSTLPIDN PIGSPRHILM RSHMVSPLRS LTNSSGSLSD VLSLPKKT
101: MESQNESCYE GVYGREDRAG LHLEEYETNY ENYYSNPFEW TTPTFHVPEY EPEEGGQARS ESSSFSDHEE EPWLVDYNKT KELQVVGVVV EDGPSLHFDK
201: CGYESTTLEE TLESTPKFYL HEPELLEPDN EADGSWESSS TGSFNSHESS KLRAMDHEEE DDDPWLVDDC ETKALKVHVM AEDGASLHLE KFENEKMLLD
301: QRVEPREDIF RLSLDDTVEE EWVTFDLETS QEDKEVNLRQ TFKLGDTEEN TPTPASASGS MLSEEEILRD QLEHFQKENE KSRRTSEVVG LRHALYQTQT
401: SPLSTLPIDN PIGSPRHILM RSHMVSPLRS LTNSSGSLSD VLSLPKKT
0001: MRTTHREYNS RPSTSVERGY HPETVYKPET SDIRREWMRR TDDFSETGDS DVFTSERSSP YNTRSNAAQW AQHEGRYADP PRVPFYPASP SPSSAYEYGY
0101: SSPFHGSYVS ASEQSYYHQQ PNQFEQYSRE GWFQESSVAS PTRFPGETSD GKYYHRSSQS QLHDLQYHNL YEPSRSETPH HSVYSERSYV PAAAPHRSTY
0201: SEHSVGISKS DTSSEKSILR NKKRYVRERN PVVKRHILPS AGGAPFATCS YCLELLQLPQ VSPQGKRQRY QVRCGSCSGV LKFSIREKAD TVLDSPSFVD
0301: YGMDFADETV TNHQDSASEG HEEINPDGSH LTCLDDDSGE TICKSNDAVI LSQKILETFE DKGIKEDIRN ISTKFLDLKL EALQPHLKPM GNRRLSEQQP
0401: TSSETIGETS KIHLEQSQEA HSEKSTEMDN NICDIEEPEY EKNEIIKPEE IVGEGSGESL EVPVNQNERM SESSEEDERV AERSVSHSEE LLYKKEYVSE
0501: TRVQSENTGD TYEFEWEETQ ETEEYEGEST LEEIGDKPQL HLDKSRYTRD SICDSSLSYG EPFEDTSVKE DTEHISNTIS DAKSATTHSP LNSLVNENQR
0601: FIGHLDQSGE ATVTISRIQE HSKYEYENLS ERQELEMTIS DRVTCKLEES RYETNETLEP SKVGEDGSLV SFEKVSEAFE TIIEGKTGEE RLVSHQMDSP
0701: NENVENSYGT LEPVYLEESG FAGERTWEGT IEDRAGLHLE EYESNYENYS RPFEWTSETA PTFRMHDYEL GTILEPDEYA DGRSESSSRG SFNDDGGSEE
0801: RVVFHESQVA IPEQSHYEYE NSSKRQELSD TVFDIARSEL QEYRYERNET LEPSKMVGDG SVVPVEKAGE TFISKKNEDS SVSHQMESQN EDMENSYGTK
0901: EPVYPEGSRC ESENSWAETM GDGAGLKLEE YNSNPFEWTS EKAAAFHLHE YERWTVPEPE EDANERSITS SRDSFNDHEN LKGIAVSHEE EPWLVDENRT
1001: EALKVGVMVE DEPSLHLTKF ENETMKLEET LEWTSERAPT FRLPEYELGE MLESDNDVDE RSEYSSKGSF NDHEIPRELL NEEDPQLVID GRTEAVQVGE
1101: MAKDTVSLHL EECGNESMKL DETFEWTSGR TLTFRRHGYE VETKLEADED ADGRSESSSR GSFNDRGSSK ERAVLHEDGS WLVDDYETKA LKVGVMAEDG
1201: SSLQLEKGEN GKMDLDETLE PRDDIFRLSL DDTLEQERMT FHLKMSQDKQ ESLRQTFKQG DAEKDSDVFS EGHEFPSKMA ELDSDTEEEI VEEQLEHLQK
1301: ENEKLSLTFE QHDHIYSTTE PSEIVGLRHA LYQTQNSPLR SPLTSPIHTP IGSPLHYLMA SQIRSPIAST MHSHIVSPLR SPINSSGSLS DVLFFSKKT
0101: SSPFHGSYVS ASEQSYYHQQ PNQFEQYSRE GWFQESSVAS PTRFPGETSD GKYYHRSSQS QLHDLQYHNL YEPSRSETPH HSVYSERSYV PAAAPHRSTY
0201: SEHSVGISKS DTSSEKSILR NKKRYVRERN PVVKRHILPS AGGAPFATCS YCLELLQLPQ VSPQGKRQRY QVRCGSCSGV LKFSIREKAD TVLDSPSFVD
0301: YGMDFADETV TNHQDSASEG HEEINPDGSH LTCLDDDSGE TICKSNDAVI LSQKILETFE DKGIKEDIRN ISTKFLDLKL EALQPHLKPM GNRRLSEQQP
0401: TSSETIGETS KIHLEQSQEA HSEKSTEMDN NICDIEEPEY EKNEIIKPEE IVGEGSGESL EVPVNQNERM SESSEEDERV AERSVSHSEE LLYKKEYVSE
0501: TRVQSENTGD TYEFEWEETQ ETEEYEGEST LEEIGDKPQL HLDKSRYTRD SICDSSLSYG EPFEDTSVKE DTEHISNTIS DAKSATTHSP LNSLVNENQR
0601: FIGHLDQSGE ATVTISRIQE HSKYEYENLS ERQELEMTIS DRVTCKLEES RYETNETLEP SKVGEDGSLV SFEKVSEAFE TIIEGKTGEE RLVSHQMDSP
0701: NENVENSYGT LEPVYLEESG FAGERTWEGT IEDRAGLHLE EYESNYENYS RPFEWTSETA PTFRMHDYEL GTILEPDEYA DGRSESSSRG SFNDDGGSEE
0801: RVVFHESQVA IPEQSHYEYE NSSKRQELSD TVFDIARSEL QEYRYERNET LEPSKMVGDG SVVPVEKAGE TFISKKNEDS SVSHQMESQN EDMENSYGTK
0901: EPVYPEGSRC ESENSWAETM GDGAGLKLEE YNSNPFEWTS EKAAAFHLHE YERWTVPEPE EDANERSITS SRDSFNDHEN LKGIAVSHEE EPWLVDENRT
1001: EALKVGVMVE DEPSLHLTKF ENETMKLEET LEWTSERAPT FRLPEYELGE MLESDNDVDE RSEYSSKGSF NDHEIPRELL NEEDPQLVID GRTEAVQVGE
1101: MAKDTVSLHL EECGNESMKL DETFEWTSGR TLTFRRHGYE VETKLEADED ADGRSESSSR GSFNDRGSSK ERAVLHEDGS WLVDDYETKA LKVGVMAEDG
1201: SSLQLEKGEN GKMDLDETLE PRDDIFRLSL DDTLEQERMT FHLKMSQDKQ ESLRQTFKQG DAEKDSDVFS EGHEFPSKMA ELDSDTEEEI VEEQLEHLQK
1301: ENEKLSLTFE QHDHIYSTTE PSEIVGLRHA LYQTQNSPLR SPLTSPIHTP IGSPLHYLMA SQIRSPIAST MHSHIVSPLR SPINSSGSLS DVLFFSKKT
Arabidopsis Description
Uncharacterized protein T5P19_60 [Source:UniProtKB/TrEMBL;Acc:Q9LXZ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.