Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72549 | Soybean | nucleus | 73.1 | 81.14 |
| KRH53706 | Soybean | nucleus | 37.32 | 44.55 |
| PGSC0003DMT400059103 | Potato | nucleus | 20.67 | 25.66 |
| Solyc03g095610.2.1 | Tomato | mitochondrion, nucleus | 18.02 | 24.03 |
| CDX80954 | Canola | mitochondrion, nucleus | 11.36 | 23.79 |
| CDX70170 | Canola | nucleus | 11.61 | 23.61 |
| VIT_13s0067g03220.t01 | Wine grape | mitochondrion, nucleus | 24.25 | 23.59 |
| CDX98822 | Canola | nucleus | 11.36 | 23.33 |
| Bra009093.1-P | Field mustard | nucleus | 11.44 | 23.3 |
| CDY52144 | Canola | nucleus | 12.13 | 22.9 |
| Bra005847.1-P | Field mustard | nucleus | 12.38 | 21.8 |
| AT5G05190.1 | Thale cress | nucleus | 11.44 | 21.79 |
| CDY27216 | Canola | nucleus | 5.21 | 13.62 |
| CDX72139 | Canola | nucleus | 5.81 | 12.3 |
| Bra007244.1-P | Field mustard | nucleus | 5.64 | 9.18 |
| CDX67646 | Canola | nucleus | 10.33 | 8.81 |
| CDY32014 | Canola | nucleus | 10.25 | 8.56 |
| Bra003240.1-P | Field mustard | nucleus | 10.33 | 8.23 |
| AT3G56410.2 | Thale cress | nucleus, plastid | 10.76 | 8.21 |
Protein Annotations
| EMBL:ACUP02009033 | EnsemblPlants:KRH16932 | EnsemblPlantsGene:GLYMA_14G186800 | EntrezGene:102664058 | InterPro:Zinc_ribbon_12 | PANTHER:PTHR31105 |
| PANTHER:PTHR31105:SF21 | PFAM:PF11331 | ProteinID:KRH16932 | ProteinID:KRH16932.1 | SEG:seg | UniParc:UPI00023D3FCB |
| UniProt:A0A0R0GSC0 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:-:45125024..45130958
Molecular Weight (calculated)
128627.0 Da
IEP (calculated)
4.828
GRAVY (calculated)
-0.924
Length
1171 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSGESAPKPK PRLVLCPKCW QLLPESPDYD VYKCGGCGTT LQAKKRRNGA VNSESNTHET DAAPRNALNK ESSTRETDAS AGNALNSESR MRETGAAPTN
0101: ALDPKTDDKK YSNGELLVSD QGNGVRKKST SSSSEECSLD GQDKRDQIEN GECNGEQLAA SQDKGFKERA TSSSSGECSL NGSGGSDQIE DGECNGEQLV
0201: TSQENGFEEK STSSSSREGS LNGNYGREQI EDGECNGEQP LISYENGLKA KTASSSPEEC SLNGNGGRDQ IEDGEFTGEL ACFSQENGLR EKATTSSSGE
0301: CSLSGNGGRD QIENGECIGE QLATSLRAKE TSSSSREYSL DGNGGRDQIE NGECNGEQIG QLNLPEEELE NEIDSLKLSD MRRHTVSYNR CSDEVTHFEI
0401: EASAELMADS SVENAKNTNL QLEGEELSNG NVPLEEAVEH LICAFDKEDG NDEKLAPVQE KSEVDIAGND IDVVEELNNG NSLLERAEKD LFSGLDREEV
0501: NNDNSALVGA NPKVDINGSN EAGSEKFNNR NLLLEVTEEE LNECALDGED RKHDQSGLVG AKSEMDNTRN ASIAQRLSTE EGRISHAYPR ELEKGTSGYH
0601: ASFKAIHHRF DRVRSVDTFV NAEVINPGFE TSGTLGGLSK SSTIQSYHAY DGSISSNDGV DEQFPNQYVD SLENTYTVAN GVSEGGSRKG KGLVNSMLCG
0701: DLETQHQSYF RERRPRVPRD SRRNLNEVPE TTRHGRAHWM RTKKDEFPAR VPNHRSGSLS GYESGSTSNQ MHDELYCSSS YRSPDSFDDP DQEKMKLLRM
0801: VYKLQEQLNR TCYLNGETNG RLSMGSHVSA YQSHDLHERR LYHGLDYPRC DEICSHGTDW CQKHNFPHVP CLTEPTSSIH HVDHSFFPCC PQQCQCSTEL
0901: PPCDLYQHEE LCRPSPGHNC CSPHHSYPSG PQWLKNLPAH GHETKSCDQK LRPEVKKYFW EKPSLTRQHY RPVAGGAPFV TCHKCLKLLQ LPSDFLLFKR
1001: VYHQLKCGAC QEVLKFSLQN RSHIVSYAPN GLKPPSSSSL DDQNEVIDGS NPHSESHADH ISYSDDYGHS VGKSYSSEGD PVSAAPLHPL HGSAYDKQTV
1101: SSGTLEPITE KDKTASRSLS TSKAPVETDE QAVNSSNNVP SELEAHSQPK SSPLHQLMGY TSPSQVIRGI P
0101: ALDPKTDDKK YSNGELLVSD QGNGVRKKST SSSSEECSLD GQDKRDQIEN GECNGEQLAA SQDKGFKERA TSSSSGECSL NGSGGSDQIE DGECNGEQLV
0201: TSQENGFEEK STSSSSREGS LNGNYGREQI EDGECNGEQP LISYENGLKA KTASSSPEEC SLNGNGGRDQ IEDGEFTGEL ACFSQENGLR EKATTSSSGE
0301: CSLSGNGGRD QIENGECIGE QLATSLRAKE TSSSSREYSL DGNGGRDQIE NGECNGEQIG QLNLPEEELE NEIDSLKLSD MRRHTVSYNR CSDEVTHFEI
0401: EASAELMADS SVENAKNTNL QLEGEELSNG NVPLEEAVEH LICAFDKEDG NDEKLAPVQE KSEVDIAGND IDVVEELNNG NSLLERAEKD LFSGLDREEV
0501: NNDNSALVGA NPKVDINGSN EAGSEKFNNR NLLLEVTEEE LNECALDGED RKHDQSGLVG AKSEMDNTRN ASIAQRLSTE EGRISHAYPR ELEKGTSGYH
0601: ASFKAIHHRF DRVRSVDTFV NAEVINPGFE TSGTLGGLSK SSTIQSYHAY DGSISSNDGV DEQFPNQYVD SLENTYTVAN GVSEGGSRKG KGLVNSMLCG
0701: DLETQHQSYF RERRPRVPRD SRRNLNEVPE TTRHGRAHWM RTKKDEFPAR VPNHRSGSLS GYESGSTSNQ MHDELYCSSS YRSPDSFDDP DQEKMKLLRM
0801: VYKLQEQLNR TCYLNGETNG RLSMGSHVSA YQSHDLHERR LYHGLDYPRC DEICSHGTDW CQKHNFPHVP CLTEPTSSIH HVDHSFFPCC PQQCQCSTEL
0901: PPCDLYQHEE LCRPSPGHNC CSPHHSYPSG PQWLKNLPAH GHETKSCDQK LRPEVKKYFW EKPSLTRQHY RPVAGGAPFV TCHKCLKLLQ LPSDFLLFKR
1001: VYHQLKCGAC QEVLKFSLQN RSHIVSYAPN GLKPPSSSSL DDQNEVIDGS NPHSESHADH ISYSDDYGHS VGKSYSSEGD PVSAAPLHPL HGSAYDKQTV
1101: SSGTLEPITE KDKTASRSLS TSKAPVETDE QAVNSSNNVP SELEAHSQPK SSPLHQLMGY TSPSQVIRGI P
001: MASQTGQKIR LVRCPKCLKI LQEDEDVPVY QCGGCSAILQ AKRRNIAPSS TPSAGETERA QANEPQSVPE TNNVSSSSGQ DTVLPSSPGR SVDQEYEKGR
101: NASMESTEKE LDDLELSNGD GTNEIQEQEC SLGDSEKNER EDNSRLESHM MNTVAEAAGS GSSSGSLSVD HVVAARASNP SGNSEISPDA SPVEEKQSQL
201: DILANKTPSA YDVVAARASN SSGNAEISPD ASPVEEKQSQ LDYPANKTSS AYDGSESSSD EREGQLLDDD EQWNALQKIR SGKFEMHRYP GYKEQGASSS
301: SPFSENRRNG ITTYNERHQN RSLQLEGPGG RLGRQGRRHV TEQLRPDMPF YPRESYTRGS PSHPSHDEFD RYPRAHSLQM PSYAGGMNHD FVDYMYHNNP
401: RARGQGQGSR ISGEMGRNHG GWYSGQLHNS YSSYSASPQR PMEQPEYHPR WRREIVSDVE DHQRNRHAGH HHELQTRRLR ERQRVAKRHV RPTAGGAPFV
501: SCYSCSENLQ LPVDFLIFKR KHHLLRCGTC TTVLRFSLQS RNHLVPAVTH DINANRNSNS TSESPIDKAP SKPEKLRSSV QDEELPVARG SPLHRLMGYS
601: TVSQVFKVSQ RPPSI
101: NASMESTEKE LDDLELSNGD GTNEIQEQEC SLGDSEKNER EDNSRLESHM MNTVAEAAGS GSSSGSLSVD HVVAARASNP SGNSEISPDA SPVEEKQSQL
201: DILANKTPSA YDVVAARASN SSGNAEISPD ASPVEEKQSQ LDYPANKTSS AYDGSESSSD EREGQLLDDD EQWNALQKIR SGKFEMHRYP GYKEQGASSS
301: SPFSENRRNG ITTYNERHQN RSLQLEGPGG RLGRQGRRHV TEQLRPDMPF YPRESYTRGS PSHPSHDEFD RYPRAHSLQM PSYAGGMNHD FVDYMYHNNP
401: RARGQGQGSR ISGEMGRNHG GWYSGQLHNS YSSYSASPQR PMEQPEYHPR WRREIVSDVE DHQRNRHAGH HHELQTRRLR ERQRVAKRHV RPTAGGAPFV
501: SCYSCSENLQ LPVDFLIFKR KHHLLRCGTC TTVLRFSLQS RNHLVPAVTH DINANRNSNS TSESPIDKAP SKPEKLRSSV QDEELPVARG SPLHRLMGYS
601: TVSQVFKVSQ RPPSI
Arabidopsis Description
EDR4Protein ENHANCED DISEASE RESISTANCE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.