Factsheet for AT5G05190.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80954	Canola	mitochondrion, nucleus	56.42	62.08
CDX98822	Canola	nucleus	54.8	59.12
Bra009093.1-P	Field mustard	nucleus	54.8	58.61
CDX70170	Canola	nucleus	54.47	58.16
CDY52144	Canola	nucleus	57.07	56.61
Bra005847.1-P	Field mustard	nucleus	57.56	53.23
PGSC0003DMT400059103	Potato	nucleus	24.23	15.8
Solyc03g095610.2.1	Tomato	mitochondrion, nucleus	21.46	15.03
KRH53706	Soybean	nucleus	22.11	13.86
KRH72549	Soybean	nucleus	23.09	13.46
VIT_13s0067g03220.t01	Wine grape	mitochondrion, nucleus	23.9	12.21
KRH16932	Soybean	nucleus	21.79	11.44
AT3G56410.2	Thale cress	nucleus, plastid	11.38	4.56

Protein Annotations

MapMan:35.1	EntrezGene:830401	UniProt:A0A178U840	ProteinID:AED90839.1	ArrayExpress:AT5G05190	EnsemblPlantsGene:AT5G05190
RefSeq:AT5G05190	TAIR:AT5G05190	RefSeq:AT5G05190-TAIR-G	EnsemblPlants:AT5G05190.1	TAIR:AT5G05190.1	EMBL:AY099876
ProteinID:BAB09695.1	EMBL:BT008380	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005886
GO:GO:0006810	GO:GO:0006897	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0009620	GO:GO:0009719	GO:GO:0009863
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030100	GO:GO:1900150	RefSeq:NP_196138.1
ProteinID:OAO89819.1	PFAM:PF11331	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009025	PO:PO:0009029	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR31105	PANTHER:PTHR31105:SF21	UniProt:Q9FHK4
UniParc:UPI00000A82A6	InterPro:Zinc_ribbon_12	SEG:seg	:	:	:

Description

EDR4Protein ENHANCED DISEASE RESISTANCE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHK4]

Coordinates

chr5:+:1541218..1544137

Molecular Weight (calculated)

68354.4 Da

IEP (calculated)

6.875

GRAVY (calculated)

-1.033

Length

615 amino acids

Sequence
(BLAST)

001: MASQTGQKIR LVRCPKCLKI LQEDEDVPVY QCGGCSAILQ AKRRNIAPSS TPSAGETERA QANEPQSVPE TNNVSSSSGQ DTVLPSSPGR SVDQEYEKGR
101: NASMESTEKE LDDLELSNGD GTNEIQEQEC SLGDSEKNER EDNSRLESHM MNTVAEAAGS GSSSGSLSVD HVVAARASNP SGNSEISPDA SPVEEKQSQL
201: DILANKTPSA YDVVAARASN SSGNAEISPD ASPVEEKQSQ LDYPANKTSS AYDGSESSSD EREGQLLDDD EQWNALQKIR SGKFEMHRYP GYKEQGASSS
301: SPFSENRRNG ITTYNERHQN RSLQLEGPGG RLGRQGRRHV TEQLRPDMPF YPRESYTRGS PSHPSHDEFD RYPRAHSLQM PSYAGGMNHD FVDYMYHNNP
401: RARGQGQGSR ISGEMGRNHG GWYSGQLHNS YSSYSASPQR PMEQPEYHPR WRREIVSDVE DHQRNRHAGH HHELQTRRLR ERQRVAKRHV RPTAGGAPFV
501: SCYSCSENLQ LPVDFLIFKR KHHLLRCGTC TTVLRFSLQS RNHLVPAVTH DINANRNSNS TSESPIDKAP SKPEKLRSSV QDEELPVARG SPLHRLMGYS
601: TVSQVFKVSQ RPPSI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.