Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003240.1-P | Field mustard | nucleus | 85.09 | 81.16 |
| CDX67646 | Canola | nucleus | 73.18 | 74.73 |
| AT3G56410.2 | Thale cress | nucleus, plastid | 54.35 | 49.64 |
| CDY27216 | Canola | nucleus | 15.55 | 48.66 |
| CDX72139 | Canola | nucleus | 11.41 | 28.93 |
| CDX98822 | Canola | nucleus | 5.78 | 14.21 |
| CDX70170 | Canola | nucleus | 5.78 | 14.06 |
| CDX80954 | Canola | mitochondrion, nucleus | 5.21 | 13.06 |
| CDY52144 | Canola | nucleus | 5.56 | 12.58 |
| PGSC0003DMT400059103 | Potato | nucleus | 7.77 | 11.56 |
| KRH53706 | Soybean | nucleus | 7.99 | 11.42 |
| KRH72549 | Soybean | nucleus | 8.06 | 10.71 |
| KRH16932 | Soybean | nucleus | 8.56 | 10.25 |
| Solyc03g095610.2.1 | Tomato | mitochondrion, nucleus | 6.13 | 9.79 |
| VIT_13s0067g03220.t01 | Wine grape | mitochondrion, nucleus | 8.35 | 9.72 |
Protein Annotations
| EnsemblPlants:CDY32014 | EnsemblPlantsGene:GSBRNA2T00050851001 | InterPro:Zinc_ribbon_12 | PFAM:PF11331 | ProteinID:CDY32014 | ProteinID:CDY32014.1 |
| SEG:seg | UniParc:UPI0004EE9486 | UniProt:A0A078H3Q6 | MapMan:35.2 | : | : |
Description
BnaC06g15920DBnaC06g15920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3Q6]
Coordinates
chrLK032284:-:244188..250311
Molecular Weight (calculated)
158535.0 Da
IEP (calculated)
4.675
GRAVY (calculated)
-1.057
Length
1402 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMKKKKHSRS QSSSKKTIEP SPDSSPSPSP RLLSIFRSKL VSGKDLKHMF RGMKTKTAPG LSSQSRIVRC PKCHKLLQEP IDATIYKCSG CNSILQAKRW
0101: DLESNGDSIP EALLYSQNRS LSTQLESAEA GSKTPMRSTH REYNWRASPS VERGYDSETV YKHETSDVHR EWMRRADEFS VTGESDAFAS ARSSPYNSRS
0201: NASEWTHHER RYQVPFYPAS PSPSSAYEYG YNSPFHGSQA SASEQSYYHH HQPNQFKQKE REGWFQESSA ASPIRFPGET SNKNYYPSSS QYHNLYEPRS
0301: SVYSERSYQA AKAPLRSTYS EHSKSGTSRE KRSQRDKKKD VRKKKPVVKR YVLPSAGGAP FATCSYCLEL LQLPQVSLHG KHKGYQVRCG SCSGVLKFSV
0401: REKADTVLDS PGFAEETVTN HQDSASEGHE EIYPDESHMS CSDNDDVILR RNVETFEDNE SKEDTRSISS TLLDSKLEAL QPSLNQKLRE QQSASSESIG
0501: ETSRKHLERS EEACSEKSTE MDNNISERVS CDVEEVGLYE KNETLEPEVM FGDGSGESVE VPVYKKERMS DSSIEAERVA DKPVSHSGET RVLSENTGYS
0601: QEFDWEETRE KEEYGGEGKW EDSMGDKLGL ILEKSRYTGD STSDNSSRNG EAYEDTKIIS AAPQNENQRF IGQSGEDTVT TSRTHEEQSK YENLSERDTT
0701: ISDSVRYIVS EESRYDTGKV SEDGSAASLT KASETFSTSI EGERGEERSA SHQMNLLPNE NVEDSYERLE YVGERTWEEE TMEDRAGLHL EEYESNYENY
0801: SKPFEWISEG ASAFHNHMHE PKLGTINEPD EDADGRLKSS SRGSFSDHES SEESAVFQES QDAQSKYEYE IPSERQELSN TERHEIQEED RYEINETFGS
0901: VASLEKTGET NIGERGEERS VSHHHMATEN ENLEISYGTV EQVYLEGGGL QLEECHNNPH EWTSERAPTF RLHEYELGTM SASEEDANGR SSSSTDSTND
1001: HEAVAHEEPS LMDENKFEEL KVTLMVEDGP SLHLDKYGND STKLEDTFER TSERAPTFRL HEYELGTMLE PEEHPDGRSE SSSTGSFNNH ESSKEMDHEE
1101: DPRLVIDSRS KAQQEGEMAK DTVPLHLECE NESMKLNETF KWTSERVLTF SHREHELGTM PEPDEDASES SLRGAFNDHG VSEERSVSHK DEPWLVEDYE
1201: TKALKASVIA DSGPSLHLEK CENVVLNQTV GPRDNLFRLS HDDTLEQERI TFHLEKSQEK QVNLRQAFKQ QGDTEDNIPA SEGHESPCKM AEVDSEAEED
1301: MLGDHLEHLQ IENERSGLTS EPYSHFYNTT DPSEIVGLRL ALYETQTSPL SSPMHTPTGS PLHILMRSPI ASPMHTHIVS PMRSPINSSG SLSDVLFFGK
1401: KA
0101: DLESNGDSIP EALLYSQNRS LSTQLESAEA GSKTPMRSTH REYNWRASPS VERGYDSETV YKHETSDVHR EWMRRADEFS VTGESDAFAS ARSSPYNSRS
0201: NASEWTHHER RYQVPFYPAS PSPSSAYEYG YNSPFHGSQA SASEQSYYHH HQPNQFKQKE REGWFQESSA ASPIRFPGET SNKNYYPSSS QYHNLYEPRS
0301: SVYSERSYQA AKAPLRSTYS EHSKSGTSRE KRSQRDKKKD VRKKKPVVKR YVLPSAGGAP FATCSYCLEL LQLPQVSLHG KHKGYQVRCG SCSGVLKFSV
0401: REKADTVLDS PGFAEETVTN HQDSASEGHE EIYPDESHMS CSDNDDVILR RNVETFEDNE SKEDTRSISS TLLDSKLEAL QPSLNQKLRE QQSASSESIG
0501: ETSRKHLERS EEACSEKSTE MDNNISERVS CDVEEVGLYE KNETLEPEVM FGDGSGESVE VPVYKKERMS DSSIEAERVA DKPVSHSGET RVLSENTGYS
0601: QEFDWEETRE KEEYGGEGKW EDSMGDKLGL ILEKSRYTGD STSDNSSRNG EAYEDTKIIS AAPQNENQRF IGQSGEDTVT TSRTHEEQSK YENLSERDTT
0701: ISDSVRYIVS EESRYDTGKV SEDGSAASLT KASETFSTSI EGERGEERSA SHQMNLLPNE NVEDSYERLE YVGERTWEEE TMEDRAGLHL EEYESNYENY
0801: SKPFEWISEG ASAFHNHMHE PKLGTINEPD EDADGRLKSS SRGSFSDHES SEESAVFQES QDAQSKYEYE IPSERQELSN TERHEIQEED RYEINETFGS
0901: VASLEKTGET NIGERGEERS VSHHHMATEN ENLEISYGTV EQVYLEGGGL QLEECHNNPH EWTSERAPTF RLHEYELGTM SASEEDANGR SSSSTDSTND
1001: HEAVAHEEPS LMDENKFEEL KVTLMVEDGP SLHLDKYGND STKLEDTFER TSERAPTFRL HEYELGTMLE PEEHPDGRSE SSSTGSFNNH ESSKEMDHEE
1101: DPRLVIDSRS KAQQEGEMAK DTVPLHLECE NESMKLNETF KWTSERVLTF SHREHELGTM PEPDEDASES SLRGAFNDHG VSEERSVSHK DEPWLVEDYE
1201: TKALKASVIA DSGPSLHLEK CENVVLNQTV GPRDNLFRLS HDDTLEQERI TFHLEKSQEK QVNLRQAFKQ QGDTEDNIPA SEGHESPCKM AEVDSEAEED
1301: MLGDHLEHLQ IENERSGLTS EPYSHFYNTT DPSEIVGLRL ALYETQTSPL SSPMHTPTGS PLHILMRSPI ASPMHTHIVS PMRSPINSSG SLSDVLFFGK
1401: KA
0001: MMKKKKQSRS QSSSTKKTFE PSSDSSPSPR LLSIIRSKLA SSKDLKHMFR GMRSRTVPGL SSQSRIVRCP KCHKLLQEPL DATSYKCGGC DSILHAKRWE
0101: PDGNDHTNTI PEALLSSQNR SLSAEVESPE DGSRTPMRTT HREYNSRPST SVERGYHPET VYKPETSDIR REWMRRTDDF SETGDSDVFT SERSSPYNTR
0201: SNAAQWAQHE GRYADPPRVP FYPASPSPSS AYEYGYSSPF HGSYVSASEQ SYYHQQPNQF EQYSREGWFQ ESSVASPTRF PGETSDGKYY HRSSQSQLHD
0301: LQYHNLYEPS RSETPHHSVY SERSYVPAAA PHRSTYSEHS VGISKSDTSS EKSILRNKKR YVRERNPVVK RHILPSAGGA PFATCSYCLE LLQLPQVSPQ
0401: GKRQRYQVRC GSCSGVLKFS IREKADTVLD SPSFVDYGMD FADETVTNHQ DSASEGHEEI NPDGSHLTCL DDDSGETICK SNDAVILSQK ILETFEDKGI
0501: KEDIRNISTK FLDLKLEALQ PHLKPMGNRR LSEQQPTSSE TIGETSKIHL EQSQEAHSEK STEMDNNICD IEEPEYEKNE IIKPEEIVGE GSGESLEVPV
0601: NQNERMSESS EEDERVAERS VSHSEELLYK KEYVSETRVQ SENTGDTYEF EWEETQETEE YEGESTLEEI GDKPQLHLDK SRYTRDSICD SSLSYGEPFE
0701: DTSVKEDTEH ISNTISDAKS ATTHSPLNSL VNENQRFIGH LDQSGEATVT ISRIQEHSKY EYENLSERQE LEMTISDRVT CKLEESRYET NETLEPSKVG
0801: EDGSLVSFEK VSEAFETIIE GKTGEERLVS HQMDSPNENV ENSYGTLEPV YLEESGFAGE RTWEGTIEDR AGLHLEEYES NYENYSRPFE WTSETAPTFR
0901: MHDYELGTIL EPDEYADGRS ESSSRGSFND DGGSEERVVF HESQVAIPEQ SHYEYENSSK RQELSDTVFD IARSELQEYR YERNETLEPS KMVGDGSVVP
1001: VEKAGETFIS KKNEDSSVSH QMESQNEDME NSYGTKEPVY PEGSRCESEN SWAETMGDGA GLKLEEYNSN PFEWTSEKAA AFHLHEYERW TVPEPEEDAN
1101: ERSITSSRDS FNDHENLKGI AVSHEEEPWL VDENRTEALK VGVMVEDEPS LHLTKFENET MKLEETLEWT SERAPTFRLP EYELGEMLES DNDVDERSEY
1201: SSKGSFNDHE IPRELLNEED PQLVIDGRTE AVQVGEMAKD TVSLHLEECG NESMKLDETF EWTSGRTLTF RRHGYEVETK LEADEDADGR SESSSRGSFN
1301: DRGSSKERAV LHEDGSWLVD DYETKALKVG VMAEDGSSLQ LEKGENGKMD LDETLEPRDD IFRLSLDDTL EQERMTFHLK MSQDKQESLR QTFKQGDAEK
1401: DSDVFSEGHE FPSKMAELDS DTEEEIVEEQ LEHLQKENEK LSLTFEQHDH IYSTTEPSEI VGLRHALYQT QNSPLRSPLT SPIHTPIGSP LHYLMASQIR
1501: SPIASTMHSH IVSPLRSPIN SSGSLSDVLF FSKKT
0101: PDGNDHTNTI PEALLSSQNR SLSAEVESPE DGSRTPMRTT HREYNSRPST SVERGYHPET VYKPETSDIR REWMRRTDDF SETGDSDVFT SERSSPYNTR
0201: SNAAQWAQHE GRYADPPRVP FYPASPSPSS AYEYGYSSPF HGSYVSASEQ SYYHQQPNQF EQYSREGWFQ ESSVASPTRF PGETSDGKYY HRSSQSQLHD
0301: LQYHNLYEPS RSETPHHSVY SERSYVPAAA PHRSTYSEHS VGISKSDTSS EKSILRNKKR YVRERNPVVK RHILPSAGGA PFATCSYCLE LLQLPQVSPQ
0401: GKRQRYQVRC GSCSGVLKFS IREKADTVLD SPSFVDYGMD FADETVTNHQ DSASEGHEEI NPDGSHLTCL DDDSGETICK SNDAVILSQK ILETFEDKGI
0501: KEDIRNISTK FLDLKLEALQ PHLKPMGNRR LSEQQPTSSE TIGETSKIHL EQSQEAHSEK STEMDNNICD IEEPEYEKNE IIKPEEIVGE GSGESLEVPV
0601: NQNERMSESS EEDERVAERS VSHSEELLYK KEYVSETRVQ SENTGDTYEF EWEETQETEE YEGESTLEEI GDKPQLHLDK SRYTRDSICD SSLSYGEPFE
0701: DTSVKEDTEH ISNTISDAKS ATTHSPLNSL VNENQRFIGH LDQSGEATVT ISRIQEHSKY EYENLSERQE LEMTISDRVT CKLEESRYET NETLEPSKVG
0801: EDGSLVSFEK VSEAFETIIE GKTGEERLVS HQMDSPNENV ENSYGTLEPV YLEESGFAGE RTWEGTIEDR AGLHLEEYES NYENYSRPFE WTSETAPTFR
0901: MHDYELGTIL EPDEYADGRS ESSSRGSFND DGGSEERVVF HESQVAIPEQ SHYEYENSSK RQELSDTVFD IARSELQEYR YERNETLEPS KMVGDGSVVP
1001: VEKAGETFIS KKNEDSSVSH QMESQNEDME NSYGTKEPVY PEGSRCESEN SWAETMGDGA GLKLEEYNSN PFEWTSEKAA AFHLHEYERW TVPEPEEDAN
1101: ERSITSSRDS FNDHENLKGI AVSHEEEPWL VDENRTEALK VGVMVEDEPS LHLTKFENET MKLEETLEWT SERAPTFRLP EYELGEMLES DNDVDERSEY
1201: SSKGSFNDHE IPRELLNEED PQLVIDGRTE AVQVGEMAKD TVSLHLEECG NESMKLDETF EWTSGRTLTF RRHGYEVETK LEADEDADGR SESSSRGSFN
1301: DRGSSKERAV LHEDGSWLVD DYETKALKVG VMAEDGSSLQ LEKGENGKMD LDETLEPRDD IFRLSLDDTL EQERMTFHLK MSQDKQESLR QTFKQGDAEK
1401: DSDVFSEGHE FPSKMAELDS DTEEEIVEEQ LEHLQKENEK LSLTFEQHDH IYSTTEPSEI VGLRHALYQT QNSPLRSPLT SPIHTPIGSP LHYLMASQIR
1501: SPIASTMHSH IVSPLRSPIN SSGSLSDVLF FSKKT
Arabidopsis Description
Uncharacterized protein T5P19_60 [Source:UniProtKB/TrEMBL;Acc:Q9LXZ9]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.