Skip to main content
crop-pal logo
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • plastid 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32014 Canola nucleus 81.16 85.09
AT3G56410.2 Thale cress nucleus, plastid 50.27 48.14
Bra007244.1-P Field mustard nucleus 17.69 36.16
Bra009093.1-P Field mustard nucleus 5.37 13.74
Bra005847.1-P Field mustard nucleus 5.44 12.03
PGSC0003DMT400059103 Potato nucleus 7.35 11.45
KRH53706 Soybean nucleus 7.21 10.81
KRH72549 Soybean nucleus 7.69 10.71
KRH16932 Soybean nucleus 8.23 10.33
Solyc03g095610.2.1 Tomato mitochondrion, nucleus 5.78 9.68
VIT_13s0067g03220.t01 Wine grape mitochondrion, nucleus 7.82 9.55
Protein Annotations
EnsemblPlants:Bra003240.1EnsemblPlants:Bra003240.1-PEnsemblPlantsGene:Bra003240InterPro:Zinc_ribbon_12ncoils:CoilPFAM:PF11331
SEG:segUniParc:UPI000254152BUniProt:M4CGA7MapMan:35.2::
Description
AT3G56410 (E=1e-134) | unknown protein
Coordinates
chrA07:-:12103929..12108529
Molecular Weight (calculated)
166235.0 Da
IEP (calculated)
4.538
GRAVY (calculated)
-1.081
Length
1470 amino acids
Sequence
(BLAST)
0001: MMKKKKHSRS QSSSKKTIEP SPDSSPSPSP RLLSIFRSKL VSGKDLKHMF RGMKTKTAPG LSSQSRIVRC PKCHKLLQEP IDATIYKCSG CNSILQAKRW
0101: DLESNGDSIP EALLYSQNRS LSTQLESAEA GSKTPIRSTH REYNSRASPS VERGYDSETV YKHETSDVHR EWMRRADEFS VTGDSDAYAS ARSSPYNSRS
0201: NASEWTQHER RYHVPFYPAS PSPSSAYEYG YNSPFHGSQA SASEKSYYHH HQQNQFKQKE REGWFQESSA SASPIRFPGE TSNKNYYPSS SQYHNLYEPR
0301: SSVYSERSYQ APLRSTYSEH SKSGTSREKR SQRDKKKDVR KKKPVVKRYV LPSAGGAPFA TCSYCLELLQ LPQVSLHGKH KGYQVRCGSC SGVLNFFVRE
0401: KADTGFAEET VSNHQDSASE GHDESHMSCS DNDDVILRRN VESFEDNESK EDTRSMSSTL LDSKLEALQP SLNQKLREQQ SASSESIGDT SRKHLEKSEE
0501: ACSEKSTEMD NNISERVSCD LEEVGLYEKN ETLKVMFGDG SGESLEVPVY KKERMSDSSI EAERVADKPV SHSAETRVLS ENTGDNQEFG WEETQEKEEY
0601: GGEGKWEDSM GDKSRYTGDS ICDNSSSNGE AYEDTKIISA APQNENQRFI GQSGEDTVTT SRTHEEQSKY ENSSERQELD TTIGDSVRYI VSEESIYDTG
0701: KVSEDGSAVS LTKASETFST SIEGERGEER SVSHQMDLLP NENVEDSYER LEYAGERTWE EETMEDRAGL HLEEYENYSK PFEWTSEVAP TFHNHMHESK
0801: VGTINEPDEE ADGRLESSSR GSFSDHESSE ESAVFQESQD AKSDQSKYVY ELPSEKQELS NDTERHEIHE EDRYETNETF EPAKMVEDGS VVSLEKTGET
0901: NIGERGEERS VSHHQMDTEN EDLEAMQDGA EFHLEDYHNN PHEWTSERAP TFRLDEYELG TMSASEEDAN GRSSSSTDST SDHESSNEKA VAHEKPSLMD
1001: ENKFEELKVS LMVGDGPSLH LDKYGNDSTK LEDTFEWTER APTFRLHDSE LGTMLEPEEH ADGGSESSST GSFNNHVSSK LRADFHEEEE EEELQLHEET
1101: EDRVALDLKK GENGSIKLEE TFEWTSERAP TFRLHDSELV TRLEPDEDAD GRSESSSKEI DIYHEEEPRL VIDSRTKAQQ EGEVAKDMAS LHLECENEPM
1201: KLNETFEWTS ERALTFRHRQ YELGTTLEPD EDASESSLRG SFNDHGVSKE GAEIQEDEPW LVDDYEAKAL KASVRADDGP SLHLEKCENE KVVLNQTLEP
1301: RDDLFKLSHD DTLEQERITF HLEKSQEKQV NLRQTFKQQG DTEHNIPASE GHESPCKMAE VDSEAEEDML GNHLEPLQIE NERSGLTSEP YSHFCNTTDP
1401: SEIVGLRLAL YETQTSPLSS PMHTPTGSPL HILMRSPIAS PMRTHIVSPM RSPINSSGSL SDVLFFGKKA
Best Arabidopsis Sequence Match ( AT3G56410.3 )
(BLAST)
0001: MRTTHREYNS RPSTSVERGY HPETVYKPET SDIRREWMRR TDDFSETGDS DVFTSERSSP YNTRSNAAQW AQHEGRYADP PRVPFYPASP SPSSAYEYGY
0101: SSPFHGSYVS ASEQSYYHQQ PNQFEQYSRE GWFQESSVAS PTRFPGETSD GKYYHRSSQS QLHDLQYHNL YEPSRSETPH HSVYSERSYV PAAAPHRSTY
0201: SEHSVGISKS DTSSEKSILR NKKRYVRERN PVVKRHILPS AGGAPFATCS YCLELLQLPQ VSPQGKRQRY QVRCGSCSGV LKFSIREKAD TVLDSPSFVD
0301: YGMDFADETV TNHQDSASEG HEEINPDGSH LTCLDDDSGE TICKSNDAVI LSQKILETFE DKGIKEDIRN ISTKFLDLKL EALQPHLKPM GNRRLSEQQP
0401: TSSETIGETS KIHLEQSQEA HSEKSTEMDN NICDIEEPEY EKNEIIKPEE IVGEGSGESL EVPVNQNERM SESSEEDERV AERSVSHSEE LLYKKEYVSE
0501: TRVQSENTGD TYEFEWEETQ ETEEYEGEST LEEIGDKPQL HLDKSRYTRD SICDSSLSYG EPFEDTSVKE DTEHISNTIS DAKSATTHSP LNSLVNENQR
0601: FIGHLDQSGE ATVTISRIQE HSKYEYENLS ERQELEMTIS DRVTCKLEES RYETNETLEP SKVGEDGSLV SFEKVSEAFE TIIEGKTGEE RLVSHQMDSP
0701: NENVENSYGT LEPVYLEESG FAGERTWEGT IEDRAGLHLE EYESNYENYS RPFEWTSETA PTFRMHDYEL GTILEPDEYA DGRSESSSRG SFNDDGGSEE
0801: RVVFHESQVA IPEQSHYEYE NSSKRQELSD TVFDIARSEL QEYRYERNET LEPSKMVGDG SVVPVEKAGE TFISKKNEDS SVSHQMESQN EDMENSYGTK
0901: EPVYPEGSRC ESENSWAETM GDGAGLKLEE YNSNPFEWTS EKAAAFHLHE YERWTVPEPE EDANERSITS SRDSFNDHEN LKGIAVSHEE EPWLVDENRT
1001: EALKVGVMVE DEPSLHLTKF ENETMKLEET LEWTSERAPT FRLPEYELGE MLESDNDVDE RSEYSSKGSF NDHEIPRELL NEEDPQLVID GRTEAVQVGE
1101: MAKDTVSLHL EECGNESMKL DETFEWTSGR TLTFRRHGYE VETKLEADED ADGRSESSSR GSFNDRGSSK ERAVLHEDGS WLVDDYETKA LKVGVMAEDG
1201: SSLQLEKGEN GKMDLDETLE PRDDIFRLSL DDTLEQERMT FHLKMSQDKQ ESLRQTFKQG DAEKDSDVFS EGHEFPSKMA ELDSDTEEEI VEEQLEHLQK
1301: ENEKLSLTFE QHDHIYSTTE PSEIVGLRHA LYQTQNSPLR SPLTSPIHTP IGSPLHYLMA SQIRSPIAST MHSHIVSPLR SPINSSGSLS DVLFFSKKT
Arabidopsis Description
Uncharacterized protein T5P19_60 [Source:UniProtKB/TrEMBL;Acc:Q9LXZ9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.