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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 mitochondrion: 27297264
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d004015_P001
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d012031_P001
Zm00001d013059_P003
Zm00001d023376_P002
Zm00001d028948_P001
Zm00001d034492_P006
Zm00001d037340_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d042341_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d051793_P001
Zm00001d052415_P001
Zm00001d052493_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48480.1 Zm00001d037340_P001 AT3G17950.1 15618630
AT1G48480.1 Zm00001d051793_P001 AT3G17950.1 15618630
AT1G48480.1 Zm00001d004015_P001 AT3G27210.1 15618630
AT1G48480.1 Zm00001d012031_P001 AT3G27210.1 15618630
AT1G48480.1 Zm00001d042341_P001 AT3G27210.1 15618630
AT3G02880.1 Zm00001d005003_P002 AT2G41090.1 17360592
AT3G02880.1 Zm00001d008278_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d010649_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d028948_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d038543_P004 AT2G41090.1 17360592
AT3G02880.1 Zm00001d038545_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d041430_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d043144_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d047597_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d052415_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d005003_P002 AT5G21274.1 17360592
AT3G02880.1 Zm00001d008278_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d010649_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d028948_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d038543_P004 AT5G21274.1 17360592
AT3G02880.1 Zm00001d038545_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d041430_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d043144_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d047597_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d052415_P001 AT5G21274.1 17360592
AT3G17840.1 Zm00001d037340_P001 AT3G17950.1 15618630
AT3G17840.1 Zm00001d051793_P001 AT3G17950.1 15618630
AT3G17840.1 Zm00001d004015_P001 AT3G27210.1 15618630
AT3G17840.1 Zm00001d012031_P001 AT3G27210.1 15618630
AT3G17840.1 Zm00001d042341_P001 AT3G27210.1 15618630
AT3G17840.1 Zm00001d013059_P003 AT3G51310.1 15618630
AT3G17840.1 Zm00001d034492_P006 AT3G51310.1 15618630
AT3G17840.1 Zm00001d023376_P002 AT5G19140.1 15618630
AT3G17840.1 Zm00001d052493_P001 AT5G19140.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d048053_P001 Maize plasma membrane 96.58 97.01
EER95247 Sorghum plasma membrane 95.68 95.4
Os03t0223000-02 Rice plasma membrane 88.24 87.85
TraesCS4D01G241100.1 Wheat plasma membrane 84.67 84.55
TraesCS4A01G064200.1 Wheat plasma membrane 83.63 82.4
TraesCS4B01G241500.1 Wheat plasma membrane 76.79 81.9
HORVU4Hr1G066900.1 Barley plasma membrane 59.97 75.19
PGSC0003DMT400036789 Potato cytosol 32.89 68.85
GSMUA_Achr10P... Banana plasma membrane 53.12 61.98
GSMUA_Achr2P21610_001 Banana plasma membrane 54.61 60.66
GSMUA_Achr6P05910_001 Banana extracellular, plasma membrane, vacuole 49.7 59.33
VIT_14s0006g01080.t01 Wine grape plasma membrane 56.25 59.15
Solyc11g011020.1.1 Tomato nucleus 55.65 58.26
GSMUA_Achr3P02160_001 Banana plasma membrane 41.52 58.0
KRH41871 Soybean endoplasmic reticulum 55.8 57.78
PGSC0003DMT400040459 Potato plasma membrane 55.51 57.65
GSMUA_Achr7P11160_001 Banana plasma membrane 45.68 57.49
Solyc03g118510.2.1 Tomato nucleus 56.55 57.49
KRH60559 Soybean endoplasmic reticulum 55.8 57.16
PGSC0003DMT400074103 Potato plasma membrane 54.17 56.17
Solyc06g068910.2.1 Tomato plasma membrane 52.68 55.84
VIT_17s0000g02010.t01 Wine grape plasma membrane 55.8 55.8
KRH17350 Soybean extracellular 51.79 55.77
KRH72980 Soybean extracellular 50.74 55.72
CDY67567 Canola plasma membrane 47.47 54.72
Zm00001d033745_P001 Maize plasma membrane 56.4 54.61
CDX77309 Canola plasma membrane 51.93 54.02
Bra021277.1-P Field mustard plasma membrane 50.6 53.8
Bra014140.1-P Field mustard plasma membrane 51.04 53.76
CDY61284 Canola plasma membrane 50.45 53.64
CDX95816 Canola plasma membrane 47.02 53.56
CDX92167 Canola plasma membrane 49.7 53.53
CDY41827 Canola plasma membrane 51.49 53.48
AT1G48480.1 Thale cress plasma membrane 51.79 53.13
AT3G17840.1 Thale cress plasma membrane 50.89 52.86
Bra022250.1-P Field mustard plasma membrane 49.55 52.77
Zm00001d013430_P001 Maize mitochondrion 56.55 52.49
KRH48661 Soybean nucleus 53.42 52.49
Bra021408.1-P Field mustard plasma membrane 46.43 51.23
CDY38103 Canola plasma membrane 46.28 50.73
CDX85498 Canola plasma membrane 45.98 50.41
Bra023574.1-P Field mustard plasma membrane 45.98 50.41
CDY49655 Canola plasma membrane 45.83 49.92
KRH39040 Soybean plasma membrane 48.51 49.85
CDX69441 Canola plasma membrane 45.83 49.84
Bra008611.1-P Field mustard plasma membrane 45.54 49.59
CDY51524 Canola plasma membrane 45.54 49.35
CDY28719 Canola plasma membrane 44.2 49.17
Bra040609.1-P Field mustard plasma membrane 45.54 49.12
AT3G02880.1 Thale cress plasma membrane 45.68 48.96
AT5G16590.1 Thale cress plasma membrane 45.39 48.8
Zm00001d003399_P001 Maize mitochondrion, plasma membrane 48.51 48.15
Zm00001d011312_P001 Maize mitochondrion, plasma membrane 47.02 46.06
Zm00001d038487_P003 Maize plasma membrane 43.15 45.74
Zm00001d020403_P001 Maize plasma membrane 43.6 45.71
Zm00001d012514_P001 Maize extracellular 42.56 45.47
Zm00001d044434_P001 Maize plasma membrane 45.98 44.33
Zm00001d022432_P001 Maize plasma membrane 41.67 44.03
Zm00001d043071_P001 Maize plasma membrane 42.71 42.84
Zm00001d039188_P001 Maize plasma membrane 40.92 42.05
Zm00001d008965_P001 Maize plasma membrane 41.52 41.52
Zm00001d032244_P001 Maize plasma membrane 40.92 40.98
Zm00001d039325_P001 Maize plasma membrane 39.43 40.33
Zm00001d050355_P001 Maize plasma membrane 41.37 40.0
Zm00001d029040_P001 Maize mitochondrion 40.48 37.78
Zm00001d039967_P001 Maize plasma membrane 36.01 36.5
Zm00001d011707_P001 Maize plasma membrane 33.18 34.26
Zm00001d004929_P001 Maize mitochondrion 38.54 33.77
Zm00001d002068_P001 Maize plasma membrane 30.65 29.39
Zm00001d018541_P002 Maize plasma membrane 32.89 27.9
Protein Annotations
Gene3D:1.10.510.10EntrezGene:103639428MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10ProteinID:AQL08586.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:IPR032675UniProt:K7VP18InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
PFAM:PF00069PFAM:PF08263ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF19
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI000220D570EnsemblPlantsGene:Zm00001d048054EnsemblPlants:Zm00001d048054_P002EnsemblPlants:Zm00001d048054_T002SEG:seg:
Description
Putative leucine-rich repeat receptor-like protein kinase family protein
Coordinates
chr9:-:148989823..148994202
Molecular Weight (calculated)
70551.4 Da
IEP (calculated)
7.052
GRAVY (calculated)
-0.036
Length
672 amino acids
Sequence
(BLAST)
001: MAAMPAPAAG LAVLVLFAAA LPALSADDLN TDAQALQALR SAVGRSALPS WNSTTPTCQW QGVTCESGRV VELRLPGAGL MGNLPSGVLG NLSALRTLSL
101: RYNALTGPIP DDLSRLSELR AIYFQHNSFS GEVPASLFEL KNLVRLDIAG NKFSGKISPD FNKLIRLGTL YMDGNSFTGE IPKLQLPALE QFNVSYNQLN
201: GSIPNTLRKM PKDSFLGNTG LCGGPLGLCP GESAPTAAGS PESQPGAGGA ADVGGGKKKK LSGGAIAGIA IGSVFGVLLL LALLFFLCRK RSSAPRSAAA
301: VEKGQELGMG PMDVEPKGQN GSASAGGAGS HNGSAAAMAV PAAAAAAATA AAKTGGSTGS KKLIFFGPMA AAPPFDLEDL LRASAEVLGK GAFGTAYKAV
401: MENGSAVAVK RLKDVDLPEP EFRERIAVIG AVQHELVVPL RAYYFSKDEK LLVYDYMSMG SLSALLHGNR ASGRTPLDWE TRSAVALAAA RGVAHIHSTG
501: PTASHGNIKS SNVLLTKNYE ARVSDHGLPT LVGPSFSPTR VSGYRAPEVT DIRRVSQKAD VYSFGVLLLE LLTGKAPTHA VVNEEGLDLP RWVQSVVREE
601: WTAEVFDQEL LRYQNVEEEM VQLLQLAIDC SAQHPDRRPA MSEVATRIDE IRRSSLGDRQ VADSAEGDEP SL
Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.