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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • plasma membrane 1
  • mitochondrion 1
  • endoplasmic reticulum 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
ChloroP:plastid
MultiLoc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:cytosol
 mitochondrion: 27297264
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d004015_P001
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d012031_P001
Zm00001d013059_P003
Zm00001d023376_P002
Zm00001d028948_P001
Zm00001d034492_P006
Zm00001d037340_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d042341_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d051793_P001
Zm00001d052415_P001
Zm00001d052493_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48480.1 Zm00001d037340_P001 AT3G17950.1 15618630
AT1G48480.1 Zm00001d051793_P001 AT3G17950.1 15618630
AT1G48480.1 Zm00001d004015_P001 AT3G27210.1 15618630
AT1G48480.1 Zm00001d012031_P001 AT3G27210.1 15618630
AT1G48480.1 Zm00001d042341_P001 AT3G27210.1 15618630
AT3G02880.1 Zm00001d005003_P002 AT2G41090.1 17360592
AT3G02880.1 Zm00001d008278_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d010649_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d028948_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d038543_P004 AT2G41090.1 17360592
AT3G02880.1 Zm00001d038545_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d041430_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d043144_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d047597_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d052415_P001 AT2G41090.1 17360592
AT3G02880.1 Zm00001d005003_P002 AT5G21274.1 17360592
AT3G02880.1 Zm00001d008278_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d010649_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d028948_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d038543_P004 AT5G21274.1 17360592
AT3G02880.1 Zm00001d038545_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d041430_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d043144_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d047597_P001 AT5G21274.1 17360592
AT3G02880.1 Zm00001d052415_P001 AT5G21274.1 17360592
AT3G17840.1 Zm00001d037340_P001 AT3G17950.1 15618630
AT3G17840.1 Zm00001d051793_P001 AT3G17950.1 15618630
AT3G17840.1 Zm00001d004015_P001 AT3G27210.1 15618630
AT3G17840.1 Zm00001d012031_P001 AT3G27210.1 15618630
AT3G17840.1 Zm00001d042341_P001 AT3G27210.1 15618630
AT3G17840.1 Zm00001d013059_P003 AT3G51310.1 15618630
AT3G17840.1 Zm00001d034492_P006 AT3G51310.1 15618630
AT3G17840.1 Zm00001d023376_P002 AT5G19140.1 15618630
AT3G17840.1 Zm00001d052493_P001 AT5G19140.1 15618630
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER90996 Sorghum plasma membrane 84.53 87.93
Zm00001d033745_P001 Maize plasma membrane 84.12 87.75
Os03t0712400-02 Rice plasma membrane 23.07 74.22
TraesCS4D01G046900.1 Wheat plasma membrane 66.44 71.68
TraesCS4B01G047100.1 Wheat plasma membrane 66.71 71.56
HORVU4Hr1G007550.1 Barley plasma membrane 65.88 71.41
TraesCS4A01G267300.1 Wheat plasma membrane 66.16 71.17
PGSC0003DMT400036789 Potato cytosol 28.59 64.49
Zm00001d048053_P001 Maize plasma membrane 52.62 56.95
GSMUA_Achr3P07440_001 Banana plasma membrane 40.47 56.56
Zm00001d048054_P002 Maize mitochondrion, plasma membrane 52.49 56.55
GSMUA_Achr9P15690_001 Banana plasma membrane 43.09 55.71
Solyc03g118510.2.1 Tomato nucleus 49.17 53.86
GSMUA_Achr8P23000_001 Banana plasma membrane 41.02 53.8
Solyc06g068910.2.1 Tomato plasma membrane 46.82 53.47
KRH41871 Soybean endoplasmic reticulum 47.93 53.47
PGSC0003DMT400074103 Potato plasma membrane 47.38 52.93
KRH60559 Soybean endoplasmic reticulum 47.93 52.9
VIT_14s0006g01080.t01 Wine grape plasma membrane 46.69 52.9
CDY67567 Canola plasma membrane 42.27 52.49
AT3G17840.1 Thale cress plasma membrane 46.82 52.4
CDX95816 Canola plasma membrane 42.68 52.37
CDY61284 Canola plasma membrane 45.58 52.22
Bra021277.1-P Field mustard plasma membrane 45.58 52.22
AT1G48480.1 Thale cress plasma membrane 46.82 51.76
VIT_17s0000g02010.t01 Wine grape plasma membrane 47.93 51.64
CDX92167 Canola plasma membrane 44.48 51.6
PGSC0003DMT400040459 Potato plasma membrane 45.72 51.16
Solyc11g011020.1.1 Tomato nucleus 45.3 51.09
KRH48661 Soybean nucleus 47.93 50.73
Bra022250.1-P Field mustard plasma membrane 44.2 50.71
Bra014140.1-P Field mustard plasma membrane 44.61 50.63
CDX77309 Canola plasma membrane 45.17 50.62
KRH17350 Soybean extracellular 43.51 50.48
CDY41827 Canola plasma membrane 45.03 50.39
KRH39040 Soybean plasma membrane 44.89 49.69
KRH72980 Soybean extracellular 41.3 48.86
AT3G02880.1 Thale cress plasma membrane 41.57 48.01
CDY51524 Canola plasma membrane 41.02 47.9
Bra021408.1-P Field mustard plasma membrane 40.19 47.78
CDY28719 Canola plasma membrane 39.78 47.68
Bra040609.1-P Field mustard plasma membrane 41.02 47.67
CDY38103 Canola plasma membrane 39.92 47.15
CDX85498 Canola plasma membrane 39.78 46.98
Bra023574.1-P Field mustard plasma membrane 39.78 46.98
CDY49655 Canola plasma membrane 39.92 46.84
Bra008611.1-P Field mustard plasma membrane 39.78 46.68
CDX69441 Canola plasma membrane 39.64 46.44
Zm00001d003399_P001 Maize mitochondrion, plasma membrane 43.23 46.23
AT5G16590.1 Thale cress plasma membrane 38.95 45.12
Zm00001d020403_P001 Maize plasma membrane 39.92 45.09
Zm00001d038487_P003 Maize plasma membrane 38.26 43.69
Zm00001d011312_P001 Maize mitochondrion, plasma membrane 41.3 43.59
Zm00001d012514_P001 Maize extracellular 37.57 43.24
Zm00001d044434_P001 Maize plasma membrane 41.02 42.61
Zm00001d022432_P001 Maize plasma membrane 37.29 42.45
Zm00001d043071_P001 Maize plasma membrane 37.98 41.04
Zm00001d039188_P001 Maize plasma membrane 36.46 40.37
Zm00001d032244_P001 Maize plasma membrane 37.02 39.94
Zm00001d050355_P001 Maize plasma membrane 38.26 39.86
Zm00001d008965_P001 Maize plasma membrane 36.46 39.29
Zm00001d039325_P001 Maize plasma membrane 35.22 38.81
Zm00001d039967_P001 Maize plasma membrane 34.94 38.16
Zm00001d029040_P001 Maize mitochondrion 37.85 38.06
Zm00001d004929_P001 Maize mitochondrion 35.91 33.9
Zm00001d011707_P001 Maize plasma membrane 29.42 32.72
Zm00001d002068_P001 Maize plasma membrane 29.42 30.39
Zm00001d018541_P002 Maize plasma membrane 28.73 26.26
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1D6GJ77ProteinID:AQK63460.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfPFAM:PF00069
PFAM:PF08263ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF103InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSUPFAM:SSF52058SUPFAM:SSF56112TMHMM:TMhelixUniParc:UPI0002213190EnsemblPlantsGene:Zm00001d013430
EnsemblPlants:Zm00001d013430_P001EnsemblPlants:Zm00001d013430_T001SEG:seg:::
Description
Atypical receptor-like kinase MARK
Coordinates
chr5:+:11236125..11239456
Molecular Weight (calculated)
75626.4 Da
IEP (calculated)
8.288
GRAVY (calculated)
-0.032
Length
724 amino acids
Sequence
(BLAST)
001: MRTGVLGFFS PRTPDARNEE TDETTLNLGS FRTGPALATS AAAAMRSPSP PPWRLRRIRF AFPMLLVVAS LAGADDLASD ARALVAFRDA VGRRLAWNAS
101: DVAGACSWTG VTCEHGRVAV LRLPGATLSG TVPAGTLGNL TALHTLSLRL NGLSGALPAD LSSAAALRNV FLNGNRLSGG FPQAILALPG LVRLSLGGND
201: LSGPIPTELG NLTHLRVLLL ENNRFSGEIS DVKLPPLQQF NVSFNQLNGS IPASLRSQPR SAFLGTGLCG GPLGPCPGEV PPSPAPAGQT PSPTPVPSGS
301: GGGGGTNGGS GVENGHKGKK LSGGAIAGIA IGSALGAALL LFLLVCLCRR SGGIRTRSLE MPPSSPAPAG GRKPPEMTSA AAVAPLTTIG HPNAPIVQST
401: SGKKLVFFGS AAAVASFKLE DLLRASAEVL GKGTFGTTYK AVLESGATLA VKRLKDVTLS EPEFRERISE IGELQHEFIV PLRAYYYSKD EKLLVYDFMP
501: KGSLSAVLHG NITSGKTPLN WDLRSSIALA AARGVEYIHS TSSTASHGNI KSSNVLLGES YQAHVSDNGL TALVGPSSSP SRATGYRAPE VIDPRRVSQK
601: ADVYSFGVLL LELVTGKAPS QAALNDEGVN LPRWVQSVSR SEWGSEVFDI ELMRHEAGEE PMAQLVLLAL DCVAQVPEAR PSMGHVVTRI EEIRKSSLTT
701: NMEEEVDDQS SKAESEVPTN PFAS
Best Arabidopsis Sequence Match ( AT1G48480.1 )
(BLAST)
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.