Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- plasma membrane 1
- mitochondrion 3
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0588300-01 | Rice | cytosol, mitochondrion | 45.78 | 50.74 |
| Os01t0133900-00 | Rice | extracellular | 24.44 | 43.65 |
| PGSC0003DMT400036789 | Potato | cytosol | 61.78 | 43.3 |
| Os01t0819100-01 | Rice | cytosol, extracellular, plasma membrane | 45.78 | 28.69 |
| TraesCS4D01G046900.1 | Wheat | plasma membrane | 78.67 | 26.38 |
| HORVU4Hr1G007550.1 | Barley | plasma membrane | 78.22 | 26.35 |
| TraesCS4B01G047100.1 | Wheat | plasma membrane | 78.67 | 26.22 |
| TraesCS4A01G267300.1 | Wheat | plasma membrane | 77.33 | 25.85 |
| EER90996 | Sorghum | plasma membrane | 76.89 | 24.86 |
| Zm00001d033745_P001 | Maize | plasma membrane | 73.33 | 23.78 |
| GSMUA_Achr8P23000_001 | Banana | plasma membrane | 57.78 | 23.55 |
| VIT_14s0006g01080.t01 | Wine grape | plasma membrane | 65.78 | 23.16 |
| Zm00001d013430_P001 | Maize | mitochondrion | 74.22 | 23.07 |
| Os03t0223000-02 | Rice | plasma membrane | 68.44 | 22.81 |
| KRH41871 | Soybean | endoplasmic reticulum | 64.44 | 22.34 |
| KRH60559 | Soybean | endoplasmic reticulum | 64.44 | 22.1 |
| KRH72980 | Soybean | extracellular | 60.0 | 22.06 |
| VIT_17s0000g02010.t01 | Wine grape | plasma membrane | 65.78 | 22.02 |
| Solyc11g011020.1.1 | Tomato | nucleus | 62.22 | 21.81 |
| PGSC0003DMT400040459 | Potato | plasma membrane | 62.67 | 21.79 |
| KRH48661 | Soybean | nucleus | 65.33 | 21.49 |
| KRH17350 | Soybean | extracellular | 59.56 | 21.47 |
| Solyc06g068910.2.1 | Tomato | plasma membrane | 60.44 | 21.45 |
| GSMUA_Achr3P07440_001 | Banana | plasma membrane | 48.89 | 21.24 |
| PGSC0003DMT400074103 | Potato | plasma membrane | 60.0 | 20.83 |
| Solyc03g118510.2.1 | Tomato | nucleus | 60.89 | 20.73 |
| CDY67567 | Canola | plasma membrane | 52.89 | 20.41 |
| CDX95816 | Canola | plasma membrane | 52.0 | 19.83 |
| Os04t0463000-01 | Rice | plasma membrane | 58.67 | 19.73 |
| Bra021277.1-P | Field mustard | plasma membrane | 54.22 | 19.3 |
| KRH39040 | Soybean | plasma membrane | 56.0 | 19.27 |
| CDY61284 | Canola | plasma membrane | 53.78 | 19.15 |
| Bra021408.1-P | Field mustard | plasma membrane | 51.56 | 19.05 |
| AT3G17840.1 | Thale cress | plasma membrane | 54.22 | 18.86 |
| Bra014140.1-P | Field mustard | plasma membrane | 53.33 | 18.81 |
| CDY49655 | Canola | plasma membrane | 51.56 | 18.8 |
| CDX77309 | Canola | plasma membrane | 53.78 | 18.73 |
| Bra008611.1-P | Field mustard | plasma membrane | 51.11 | 18.64 |
| CDX69441 | Canola | plasma membrane | 51.11 | 18.61 |
| CDX85498 | Canola | plasma membrane | 50.67 | 18.6 |
| Bra023574.1-P | Field mustard | plasma membrane | 50.67 | 18.6 |
| CDY38103 | Canola | plasma membrane | 50.67 | 18.6 |
| CDX92167 | Canola | plasma membrane | 51.56 | 18.59 |
| CDY41827 | Canola | plasma membrane | 53.33 | 18.55 |
| CDY28719 | Canola | plasma membrane | 49.78 | 18.54 |
| CDY51524 | Canola | plasma membrane | 50.22 | 18.23 |
| Bra022250.1-P | Field mustard | plasma membrane | 51.11 | 18.23 |
| GSMUA_Achr9P15690_001 | Banana | plasma membrane | 45.33 | 18.21 |
| Bra040609.1-P | Field mustard | plasma membrane | 50.22 | 18.14 |
| AT1G48480.1 | Thale cress | plasma membrane | 52.44 | 18.02 |
| AT3G02880.1 | Thale cress | plasma membrane | 49.78 | 17.86 |
| AT5G16590.1 | Thale cress | plasma membrane | 48.89 | 17.6 |
| Os01t0607900-01 | Rice | plasma membrane | 52.0 | 17.11 |
| Os05t0480400-01 | Rice | plasma membrane | 48.44 | 17.08 |
| Os07t0681100-01 | Rice | plasma membrane | 47.56 | 16.72 |
| Os03t0332900-01 | Rice | plasma membrane | 46.67 | 16.56 |
| Os09t0400500-01 | Rice | plasma membrane | 43.56 | 15.12 |
| Os12t0145900-01 | Rice | golgi, plasma membrane | 45.78 | 12.99 |
| Os01t0711200-01 | Rice | plasma membrane | 36.89 | 12.65 |
| Os04t0649700-01 | Rice | plasma membrane | 31.56 | 10.0 |
| Os08t0427600-00 | Rice | golgi, plasma membrane | 0.89 | 0.45 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:50.2.7 | ProteinID:BAF12978.1 | ProteinID:BAS86043.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | EnsemblPlantsGene:Os03g0712400 | EnsemblPlants:Os03t0712400-02 | PFAM:PF00069 | PFscan:PS50011 |
| PANTHER:PTHR27008 | PANTHER:PTHR27008:SF103 | InterPro:Prot_kinase_dom | UniProt:Q0DP60 | SUPFAM:SSF56112 | UniParc:UPI0000E121D2 |
Description
Similar to atypical receptor-like kinase MARK. (Os03t0712400-01);Similar to Atypical receptor-like kinase MARK. (Os03t0712400-02)
Coordinates
chr3:-:28795423..28797588
Molecular Weight (calculated)
24412.5 Da
IEP (calculated)
5.123
GRAVY (calculated)
-0.462
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: AGNRGSGRTP LNWETRSSIA LAAARGVEYI HSTSSSASHG NIKSSNVLLN KSYQARLSDN GLSALVGPSS APSRASGYRA PEVTDPRRVS QKADVYSFGV
101: LLLELLTGKA PSQAALNDEG VDLPRWVQSV VRSEWTAEVF DMELLRYQNV EEQMVQLLQL AIDCVAQVPD ARPSMPHVVL RIEEIKKSSE RLEGRDPQQQ
201: ASNLEAGDDQ TSKPESAEGL NPFAP
101: LLLELLTGKA PSQAALNDEG VDLPRWVQSV VRSEWTAEVF DMELLRYQNV EEQMVQLLQL AIDCVAQVPD ARPSMPHVVL RIEEIKKSSE RLEGRDPQQQ
201: ASNLEAGDDQ TSKPESAEGL NPFAP
001: MRVFFFPNSS MAILSVFLSL LLLSLPLPST QDLNADRTAL LSLRSAVGGR TFRWNIKQTS PCNWAGVKCE SNRVTALRLP GVALSGDIPE GIFGNLTQLR
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
101: TLSLRLNALS GSLPKDLSTS SNLRHLYLQG NRFSGEIPEV LFSLSHLVRL NLASNSFTGE ISSGFTNLTK LKTLFLENNQ LSGSIPDLDL PLVQFNVSNN
201: SLNGSIPKNL QRFESDSFLQ TSLCGKPLKL CPDEETVPSQ PTSGGNRTPP SVEGSEEKKK KNKLSGGAIA GIVIGCVVGF ALIVLILMVL CRKKSNKRSR
301: AVDISTIKQQ EPEIPGDKEA VDNGNVYSVS AAAAAAMTGN GKASEGNGPA TKKLVFFGNA TKVFDLEDLL RASAEVLGKG TFGTAYKAVL DAVTVVAVKR
401: LKDVMMADKE FKEKIELVGA MDHENLVPLR AYYFSRDEKL LVYDFMPMGS LSALLHGNRG AGRSPLNWDV RSRIAIGAAR GLDYLHSQGT STSHGNIKSS
501: NILLTKSHDA KVSDFGLAQL VGSSATNPNR ATGYRAPEVT DPKRVSQKGD VYSFGVVLLE LITGKAPSNS VMNEEGVDLP RWVKSVARDE WRREVFDSEL
601: LSLATDEEEM MAEMVQLGLE CTSQHPDQRP EMSEVVRKME NLRPYSGSDQ VNEAD
Arabidopsis Description
RKL1Probable inactive receptor kinase At1g48480 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP77]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.