Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G448400.1 | Wheat | golgi | 87.22 | 94.7 |
| HORVU5Hr1G107250.1 | Barley | cytosol | 87.22 | 94.7 |
| TraesCS5D01G455000.1 | Wheat | cytosol | 87.11 | 94.58 |
| EER93269 | Sorghum | cytosol | 88.15 | 94.52 |
| Zm00001d034492_P006 | Maize | endoplasmic reticulum, extracellular | 76.31 | 93.59 |
| Zm00001d013059_P003 | Maize | cytosol | 87.22 | 91.14 |
| GSMUA_Achr9P11120_001 | Banana | cytosol | 79.33 | 86.57 |
| TraesCS5B01G453000.1 | Wheat | cytosol | 87.11 | 84.94 |
| VIT_18s0001g14680.t01 | Wine grape | cytosol | 76.42 | 83.29 |
| KRH76626 | Soybean | endoplasmic reticulum | 75.26 | 81.61 |
| KRH28827 | Soybean | cytosol, endoplasmic reticulum, nucleus | 75.03 | 81.36 |
| Solyc12g089340.1.1 | Tomato | cytosol, nucleus, plastid | 74.56 | 81.16 |
| PGSC0003DMT400075420 | Potato | cytosol | 74.22 | 80.78 |
| GSMUA_Achr4P17490_001 | Banana | cytosol | 74.22 | 80.78 |
| PGSC0003DMT400058024 | Potato | cytosol | 73.64 | 80.25 |
| Solyc03g033400.2.1 | Tomato | cytosol, nucleus | 73.4 | 80.0 |
| VIT_04s0023g03870.t01 | Wine grape | cytosol, mitochondrion | 77.24 | 79.74 |
| Solyc02g083560.2.1 | Tomato | cytosol | 73.05 | 79.62 |
| KRH05971 | Soybean | cytosol | 73.64 | 79.45 |
| KRH17452 | Soybean | endoplasmic reticulum | 73.52 | 79.42 |
| PGSC0003DMT400009386 | Potato | cytosol | 72.82 | 79.37 |
| CDX87655 | Canola | cytosol | 71.31 | 77.53 |
| AT1G75850.1 | Thale cress | cytosol | 70.15 | 76.46 |
| Bra015806.1-P | Field mustard | cytosol | 71.2 | 75.96 |
| CDX73208 | Canola | cytosol | 62.95 | 75.91 |
| CDY13527 | Canola | mitochondrion | 57.84 | 75.57 |
| Bra002092.1-P | Field mustard | cytosol | 67.94 | 74.24 |
| CDY24377 | Canola | cytosol | 67.94 | 74.24 |
| CDY20826 | Canola | cytosol | 67.71 | 73.98 |
| AT2G17790.1 | Thale cress | cytosol | 67.48 | 73.82 |
| CDX73731 | Canola | cytosol | 63.65 | 69.37 |
| CDX77995 | Canola | cytosol | 63.41 | 69.11 |
| KRH15953 | Soybean | cytosol | 5.69 | 69.01 |
| AT3G51310.1 | Thale cress | cytosol | 63.3 | 68.99 |
| Bra036818.1-P | Field mustard | cytosol | 63.41 | 68.85 |
| CDY59615 | Canola | cytosol | 62.95 | 68.0 |
| CDX73207 | Canola | cytosol | 6.74 | 63.74 |
| KRH37553 | Soybean | cytosol | 8.48 | 62.93 |
| CDY13526 | Canola | cytosol | 8.71 | 62.5 |
| CDY39067 | Canola | endoplasmic reticulum, golgi | 19.16 | 56.12 |
Protein Annotations
| Gene3D:1.25.40.660 | MapMan:22.5.5.3.1 | UniProt:A0A0P0W4D5 | InterPro:ARM-type_fold | ProteinID:BAS86894.1 | ProteinID:BAS86895.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005770 | GO:GO:0005829 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0008150 | GO:GO:0008565 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0030904 | GO:GO:0030906 |
| GO:GO:0042147 | EnsemblPlantsGene:Os03g0801600 | EnsemblPlants:Os03t0801600-01 | PFAM:PF03635 | PIRSF:PIRSF009375 | PANTHER:PTHR11099 |
| PANTHER:PTHR11099:SF1 | SUPFAM:SSF48371 | UniParc:UPI000393969B | InterPro:Vps35 | SEG:seg | : |
Description
Similar to vacuolar protein sorting 35. (Os03t0801600-01);Similar to vacuolar protein sorting 35. (Os03t0801600-02)
Coordinates
chr3:+:33424913..33433067
Molecular Weight (calculated)
97456.6 Da
IEP (calculated)
6.476
GRAVY (calculated)
-0.307
Length
861 amino acids
Sequence
(BLAST)
(BLAST)
001: FGKQKKKRKK PIIKKHSKNT NTRPDPNPRG DKPTRERRDP TPTPTRATRG RPDPPPQPAK TAATAAVRML PDGGADDEER WLAEGIAGVQ QNAFYMHRAL
101: DSNNLKDALK YSAQMLSELR TSRLSPHKYY DLYMRAFDEM RKLEMFFREE TRRGSCSVVD LYELVQHAGN VLPRLYLLCT VGSVYIKSKE APAKDVLKDL
201: VEMCRGIQHP LRGLFLRSYL SQISRDKLPD IGSEYEGDAD SINVAVEFVL QNFIEMNKLW VRMQHQGPVR EKEKRGKERN ELRDLVGKNL HVLSQIEGVD
301: LDMYKETVLP RILEQVVNCK DELAQFYLMD CIIQVFPDEY HLQTLETLLS AFPQLQPNVD IKTVLSQLMD RLSSYAAASP EVLPEFLQVE AFAKFSNAIG
401: KVIEAQVDMP VVGAVTLYVS LLTFTLRVHP DRLDYVDQVL GACVKKLSGN AKLEDSRATK QIVALLSAPL EKYSNIVTAL ELSNYPRVMD YLDNSTTKVM
501: ALVIIQSIMK NTTCISTSDK IEALFDLIKG LIKDMDGAQN DELDDEDFKE EQNSVARLIH MLHNDDHEEM LKILCTVQKH ILQGGPKRLP FTVPSLVFSA
601: LKLVRRLQGQ DGDVIGEEVP ATPKKIFQIL HQTIEALSCV PSPELALRLY LQCAEAANDC DLEPVAYEFF TQAFILYEEE IADSKAQITA IHLIIGTLQR
701: MNIFGVENRD TLTHKTTGYS AKLLKKPDQC RAVYACSHLF WTDDQDGIMD GERVLLCLKR ALRIANAAQQ MANVTRGSSG SVALFIEILN KYLYFFEKGI
801: PEITNTVIQD LIELIRTEKQ SENTVADPST EAFFASTLRY IEFQKQKGGS IGEKYEQIKT T
101: DSNNLKDALK YSAQMLSELR TSRLSPHKYY DLYMRAFDEM RKLEMFFREE TRRGSCSVVD LYELVQHAGN VLPRLYLLCT VGSVYIKSKE APAKDVLKDL
201: VEMCRGIQHP LRGLFLRSYL SQISRDKLPD IGSEYEGDAD SINVAVEFVL QNFIEMNKLW VRMQHQGPVR EKEKRGKERN ELRDLVGKNL HVLSQIEGVD
301: LDMYKETVLP RILEQVVNCK DELAQFYLMD CIIQVFPDEY HLQTLETLLS AFPQLQPNVD IKTVLSQLMD RLSSYAAASP EVLPEFLQVE AFAKFSNAIG
401: KVIEAQVDMP VVGAVTLYVS LLTFTLRVHP DRLDYVDQVL GACVKKLSGN AKLEDSRATK QIVALLSAPL EKYSNIVTAL ELSNYPRVMD YLDNSTTKVM
501: ALVIIQSIMK NTTCISTSDK IEALFDLIKG LIKDMDGAQN DELDDEDFKE EQNSVARLIH MLHNDDHEEM LKILCTVQKH ILQGGPKRLP FTVPSLVFSA
601: LKLVRRLQGQ DGDVIGEEVP ATPKKIFQIL HQTIEALSCV PSPELALRLY LQCAEAANDC DLEPVAYEFF TQAFILYEEE IADSKAQITA IHLIIGTLQR
701: MNIFGVENRD TLTHKTTGYS AKLLKKPDQC RAVYACSHLF WTDDQDGIMD GERVLLCLKR ALRIANAAQQ MANVTRGSSG SVALFIEILN KYLYFFEKGI
801: PEITNTVIQD LIELIRTEKQ SENTVADPST EAFFASTLRY IEFQKQKGGS IGEKYEQIKT T
001: MRTLAGVEDE DKWLAEGIAG IQHNAFFMHR ALDANNLREV LKYSALMLSE LRTSKLSPQK YYDLYMRAFD QLRQLEIFFK DESRHGLPVV DLYELVQHAG
101: NILPRMYLLC TVGSVYIKSK QAPSKDVLKD LVEMCRGVQH PIRGLFLRSY LAQVSRDKLP EIGSDYEGDA NTVMDAVEFV LQNFTEMNKL WVRIQHQGPG
201: TVREKQEKER NELRDLVGKN LHVLGQIEGV DLEMYKETVL PRVLEQVVNC KDKLAQYYLM ECIIQVFPDE YHLQTLETLL AACTQLMPTV DTKIVLTQLM
301: DRLSNYAASS PDVLHEFLQV EAFAKLSNAI GKVIDTQLEM PIVGAMTLFV SLLTFTLRVH PDRLDYVDQV LGACVVKLSS VPKLEDARAM KQVVALLSAP
401: LEKYSDIVTA LTLSNYPRVM DHLDDGTNKV MAMLIIQSIM KTDSCISTAD KVEVLFELIK GLIKDLDETN AEELDEEDFQ EEQNSVARLI HMLDNEEPEE
501: MLKIICVVRR HLMTGGPRRL PFTVPPLVFS AVRLVRQLES QGGDIAGEDS ATPRKIFQIL NQTIEVLTSV PCPELALRLY LQCAEAASDC DLEPVAYEFF
601: TQAFMLYEEE IADSKAQVTA IHLIVGTLQR INVFGVENRD TLTHKATGYS ARLLKKPDQC RAVYACSHLF WVDDPDGIKD GERVLLCLRR ALRIANAAQQ
701: MASATRGSSG PVTLFVEILN KYIYFFEKGN PHITPSDIQS LIELINNEMQ SDNGNTTIHS DPFFTSTLRY IKFIKQKGGL MGEKYDPIKL
101: NILPRMYLLC TVGSVYIKSK QAPSKDVLKD LVEMCRGVQH PIRGLFLRSY LAQVSRDKLP EIGSDYEGDA NTVMDAVEFV LQNFTEMNKL WVRIQHQGPG
201: TVREKQEKER NELRDLVGKN LHVLGQIEGV DLEMYKETVL PRVLEQVVNC KDKLAQYYLM ECIIQVFPDE YHLQTLETLL AACTQLMPTV DTKIVLTQLM
301: DRLSNYAASS PDVLHEFLQV EAFAKLSNAI GKVIDTQLEM PIVGAMTLFV SLLTFTLRVH PDRLDYVDQV LGACVVKLSS VPKLEDARAM KQVVALLSAP
401: LEKYSDIVTA LTLSNYPRVM DHLDDGTNKV MAMLIIQSIM KTDSCISTAD KVEVLFELIK GLIKDLDETN AEELDEEDFQ EEQNSVARLI HMLDNEEPEE
501: MLKIICVVRR HLMTGGPRRL PFTVPPLVFS AVRLVRQLES QGGDIAGEDS ATPRKIFQIL NQTIEVLTSV PCPELALRLY LQCAEAASDC DLEPVAYEFF
601: TQAFMLYEEE IADSKAQVTA IHLIVGTLQR INVFGVENRD TLTHKATGYS ARLLKKPDQC RAVYACSHLF WVDDPDGIKD GERVLLCLRR ALRIANAAQQ
701: MASATRGSSG PVTLFVEILN KYIYFFEKGN PHITPSDIQS LIELINNEMQ SDNGNTTIHS DPFFTSTLRY IKFIKQKGGL MGEKYDPIKL
Arabidopsis Description
VPS35BVacuolar protein sorting-associated protein 35 [Source:UniProtKB/TrEMBL;Acc:A0A178WDK6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.