Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g089340.1.1 | Tomato | cytosol, nucleus, plastid | 98.86 | 98.86 |
| VIT_18s0001g14680.t01 | Wine grape | cytosol | 85.97 | 86.08 |
| KRH05971 | Soybean | cytosol | 82.43 | 81.7 |
| KRH17452 | Soybean | endoplasmic reticulum | 81.67 | 81.05 |
| Zm00001d034492_P006 | Maize | endoplasmic reticulum, extracellular | 71.43 | 80.48 |
| EER93269 | Sorghum | cytosol | 81.29 | 80.07 |
| CDX87655 | Canola | cytosol | 79.9 | 79.8 |
| TraesCS5D01G455000.1 | Wheat | cytosol | 79.9 | 79.7 |
| TraesCS5A01G448400.1 | Wheat | golgi | 79.9 | 79.7 |
| AT1G75850.1 | Thale cress | cytosol | 78.89 | 78.99 |
| Bra015806.1-P | Field mustard | cytosol | 79.77 | 78.19 |
| PGSC0003DMT400058024 | Potato | cytosol | 78.0 | 78.1 |
| CDX73208 | Canola | cytosol | 70.16 | 77.73 |
| PGSC0003DMT400009386 | Potato | cytosol | 77.5 | 77.59 |
| Zm00001d013059_P003 | Maize | cytosol | 80.53 | 77.31 |
| CDY13527 | Canola | mitochondrion | 64.35 | 77.24 |
| Os03t0801600-01 | Rice | cytosol | 80.78 | 74.22 |
| TraesCS5B01G453000.1 | Wheat | cytosol | 79.77 | 71.46 |
| CDX73207 | Canola | cytosol | 8.09 | 70.33 |
| CDY13526 | Canola | cytosol | 10.37 | 68.33 |
| KRH37553 | Soybean | cytosol | 9.36 | 63.79 |
| CDY39067 | Canola | endoplasmic reticulum, golgi | 22.25 | 59.86 |
| GSMUA_Achr3P01920_001 | Banana | cytosol | 4.93 | 46.99 |
| GSMUA_Achr5P27230_001 | Banana | cytosol | 5.69 | 36.0 |
Protein Annotations
| Gene3D:1.25.40.660 | EntrezGene:102587668 | MapMan:22.5.5.3.1 | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008565 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0030904 |
| GO:GO:0030906 | GO:GO:0042147 | UniProt:M1CV55 | PFAM:PF03635 | EnsemblPlantsGene:PGSC0003DMG400029334 | PGSC:PGSC0003DMG400029334 |
| EnsemblPlants:PGSC0003DMT400075420 | PIRSF:PIRSF009375 | PANTHER:PTHR11099 | PANTHER:PTHR11099:SF1 | SUPFAM:SSF48371 | UniParc:UPI000295696A |
| InterPro:Vps35 | RefSeq:XP_006342566.1 | : | : | : | : |
Description
Vacuolar protein sorting 35 [Source:PGSC_GENE;Acc:PGSC0003DMG400029334]
Coordinates
chr12:-:57127759..57140146
Molecular Weight (calculated)
89210.1 Da
IEP (calculated)
5.025
GRAVY (calculated)
-0.128
Length
791 amino acids
Sequence
(BLAST)
(BLAST)
001: MLATEGMEDE EKWLAEGIAA IQHNAFYMSR ALDSDNLREA LKYSALLLSE LRTSKLSPHK YYELYMRAFD ELRKLEMFFR EEDRHGCSVI DLYELVQHAG
101: NILPRLYLLC TVGSVYIKSK EAPAKDILKD LVEMCRGIQH PTRGLFLRSY LAQISRDKLP DLGSEYEGEG DTVMDAVDFV LQNFTEMNKL WVRMQHNGPV
201: RLKEKLDKER SELRDLVGKN LHVLSQIEGV DLEMYKDVVL PRVLEQVVNC KDEIAQYYLM DCIIQVFPDE YHLQTLETLL GACPQLQPAV DVKTVLSRLM
301: ERLSNYADSS PEVLPDFLQV EAFAKLSSAI GKVIEAQVDM PVVGAISLYV SLLTFTLRVH PDRLDYVDQI LGACVKKLSG KAKLEDSKAT KQVVALLSAP
401: LEKYTDIVTV LTLSNYPRVM DHLDAGTNKI MATIIIESIM KYDTCVSTAD KVEVLFELIK GLIKELDGTA TDELDEEDFK EEQNSVARLI HVMYNDEPEE
501: MLKIICTVRK HIMAGGPKRL TFTVPPLAFS ALKLVRRLQG QDGDMAGEEV PATPKKIFKL LNEIIEALSS VPSPELALRL YLQCAEAAND CELEPIAYEF
601: FTQAFVLYEE EVADSKAQVT AIHLIIGTLQ KMTVFGVENR DTLTHKATGY SAKLLKKPDQ CRAVYACSHL FWVDDQDGIK DGERVLLCLK RSLRIANAAQ
701: QQANVTRGSS GPVTLFVEIL NKYLYFFEKG NPQITSSAIQ SLIELIKTEM QSDTTTPDKA SDAFFSSTLR YVQFQKQKGG IMGEKYGPIK V
101: NILPRLYLLC TVGSVYIKSK EAPAKDILKD LVEMCRGIQH PTRGLFLRSY LAQISRDKLP DLGSEYEGEG DTVMDAVDFV LQNFTEMNKL WVRMQHNGPV
201: RLKEKLDKER SELRDLVGKN LHVLSQIEGV DLEMYKDVVL PRVLEQVVNC KDEIAQYYLM DCIIQVFPDE YHLQTLETLL GACPQLQPAV DVKTVLSRLM
301: ERLSNYADSS PEVLPDFLQV EAFAKLSSAI GKVIEAQVDM PVVGAISLYV SLLTFTLRVH PDRLDYVDQI LGACVKKLSG KAKLEDSKAT KQVVALLSAP
401: LEKYTDIVTV LTLSNYPRVM DHLDAGTNKI MATIIIESIM KYDTCVSTAD KVEVLFELIK GLIKELDGTA TDELDEEDFK EEQNSVARLI HVMYNDEPEE
501: MLKIICTVRK HIMAGGPKRL TFTVPPLAFS ALKLVRRLQG QDGDMAGEEV PATPKKIFKL LNEIIEALSS VPSPELALRL YLQCAEAAND CELEPIAYEF
601: FTQAFVLYEE EVADSKAQVT AIHLIIGTLQ KMTVFGVENR DTLTHKATGY SAKLLKKPDQ CRAVYACSHL FWVDDQDGIK DGERVLLCLK RSLRIANAAQ
701: QQANVTRGSS GPVTLFVEIL NKYLYFFEKG NPQITSSAIQ SLIELIKTEM QSDTTTPDKA SDAFFSSTLR YVQFQKQKGG IMGEKYGPIK V
001: MRTLAGVEDE DKWLAEGIAG IQHNAFFMHR ALDANNLREV LKYSALMLSE LRTSKLSPQK YYDLYMRAFD QLRQLEIFFK DESRHGLPVV DLYELVQHAG
101: NILPRMYLLC TVGSVYIKSK QAPSKDVLKD LVEMCRGVQH PIRGLFLRSY LAQVSRDKLP EIGSDYEGDA NTVMDAVEFV LQNFTEMNKL WVRIQHQGPG
201: TVREKQEKER NELRDLVGKN LHVLGQIEGV DLEMYKETVL PRVLEQVVNC KDKLAQYYLM ECIIQVFPDE YHLQTLETLL AACTQLMPTV DTKIVLTQLM
301: DRLSNYAASS PDVLHEFLQV EAFAKLSNAI GKVIDTQLEM PIVGAMTLFV SLLTFTLRVH PDRLDYVDQV LGACVVKLSS VPKLEDARAM KQVVALLSAP
401: LEKYSDIVTA LTLSNYPRVM DHLDDGTNKV MAMLIIQSIM KTDSCISTAD KVEVLFELIK GLIKDLDETN AEELDEEDFQ EEQNSVARLI HMLDNEEPEE
501: MLKIICVVRR HLMTGGPRRL PFTVPPLVFS AVRLVRQLES QGGDIAGEDS ATPRKIFQIL NQTIEVLTSV PCPELALRLY LQCAEAASDC DLEPVAYEFF
601: TQAFMLYEEE IADSKAQVTA IHLIVGTLQR INVFGVENRD TLTHKATGYS ARLLKKPDQC RAVYACSHLF WVDDPDGIKD GERVLLCLRR ALRIANAAQQ
701: MASATRGSSG PVTLFVEILN KYIYFFEKGN PHITPSDIQS LIELINNEMQ SDNGNTTIHS DPFFTSTLRY IKFIKQKGGL MGEKYDPIKL
101: NILPRMYLLC TVGSVYIKSK QAPSKDVLKD LVEMCRGVQH PIRGLFLRSY LAQVSRDKLP EIGSDYEGDA NTVMDAVEFV LQNFTEMNKL WVRIQHQGPG
201: TVREKQEKER NELRDLVGKN LHVLGQIEGV DLEMYKETVL PRVLEQVVNC KDKLAQYYLM ECIIQVFPDE YHLQTLETLL AACTQLMPTV DTKIVLTQLM
301: DRLSNYAASS PDVLHEFLQV EAFAKLSNAI GKVIDTQLEM PIVGAMTLFV SLLTFTLRVH PDRLDYVDQV LGACVVKLSS VPKLEDARAM KQVVALLSAP
401: LEKYSDIVTA LTLSNYPRVM DHLDDGTNKV MAMLIIQSIM KTDSCISTAD KVEVLFELIK GLIKDLDETN AEELDEEDFQ EEQNSVARLI HMLDNEEPEE
501: MLKIICVVRR HLMTGGPRRL PFTVPPLVFS AVRLVRQLES QGGDIAGEDS ATPRKIFQIL NQTIEVLTSV PCPELALRLY LQCAEAASDC DLEPVAYEFF
601: TQAFMLYEEE IADSKAQVTA IHLIVGTLQR INVFGVENRD TLTHKATGYS ARLLKKPDQC RAVYACSHLF WVDDPDGIKD GERVLLCLRR ALRIANAAQQ
701: MASATRGSSG PVTLFVEILN KYIYFFEKGN PHITPSDIQS LIELINNEMQ SDNGNTTIHS DPFFTSTLRY IKFIKQKGGL MGEKYDPIKL
Arabidopsis Description
VPS35BVacuolar protein sorting-associated protein 35 [Source:UniProtKB/TrEMBL;Acc:A0A178WDK6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.