CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P01920_001	Banana	cytosol	31.67	45.78
GSMUA_Achr5P27230_001	Banana	cytosol	15.83	15.2
CDX73208	Canola	cytosol	84.17	14.15
AT1G75850.1	Thale cress	cytosol	84.17	12.78
CDX87655	Canola	cytosol	83.33	12.63
KRH17452	Soybean	endoplasmic reticulum	71.67	10.79
KRH05971	Soybean	cytosol	71.67	10.78
VIT_18s0001g14680.t01	Wine grape	cytosol	68.33	10.38
Solyc12g089340.1.1	Tomato	cytosol, nucleus, plastid	68.33	10.37
PGSC0003DMT400075420	Potato	cytosol	68.33	10.37
TraesCS5D01G455000.1	Wheat	cytosol	60.83	9.21
TraesCS5A01G448400.1	Wheat	golgi	60.83	9.21
CDY24377	Canola	cytosol	60.0	9.14
CDY20826	Canola	cytosol	60.0	9.14
EER93269	Sorghum	cytosol	60.0	8.97
Zm00001d013059_P003	Maize	cytosol	60.0	8.74
Os03t0801600-01	Rice	cytosol	62.5	8.71
TraesCS5B01G453000.1	Wheat	cytosol	60.83	8.27
CDX77995	Canola	cytosol	52.5	7.97
CDX73731	Canola	cytosol	52.5	7.97
CDY59615	Canola	cytosol	51.67	7.78
CDY39067	Canola	endoplasmic reticulum, golgi	8.33	3.4
Zm00001d034492_P006	Maize	endoplasmic reticulum, extracellular	5.83	1.0
KRH37553	Soybean	cytosol	0.83	0.86
CDY13527	Canola	mitochondrion	4.17	0.76
CDX73207	Canola	cytosol	0.0	0.0

Protein Annotations

MapMan:35.1	GO:A0A078FK71	UniProt:A0A078FK71	EnsemblPlants:CDY13526	ProteinID:CDY13526	ProteinID:CDY13526.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006810	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0016020
GO:GO:0030904	GO:GO:0030906	GO:GO:0042147	EnsemblPlantsGene:GSBRNA2T00077847001	PFAM:PF03635	PANTHER:PTHR11099
PANTHER:PTHR11099:SF1	UniParc:UPI0004EE4DFE	InterPro:Vps35	:	:	:

Description

BnaC02g23370DBnaC02g23370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FK71]

Coordinates

chrLK032036:+:26128..26784

Molecular Weight (calculated)

14004.0 Da

IEP (calculated)

6.349

GRAVY (calculated)

-0.176

Length

120 amino acids

Sequence
(BLAST)

001: MRRLGGVEDE EKWLAEGIAG IQHNAFFMHR ALDANNLREV LKYSALMLSE LRTSNLSPQK YYDLYMRAFD QLRQLEIFLR DESRHGLPVV DLYELVQHAG
101: NIFDHLIVSI ISYRLGPLQL

Best Arabidopsis Sequence Match ( AT1G75850.1 )
(BLAST)

001: MRTLAGVEDE DKWLAEGIAG IQHNAFFMHR ALDANNLREV LKYSALMLSE LRTSKLSPQK YYDLYMRAFD QLRQLEIFFK DESRHGLPVV DLYELVQHAG
101: NILPRMYLLC TVGSVYIKSK QAPSKDVLKD LVEMCRGVQH PIRGLFLRSY LAQVSRDKLP EIGSDYEGDA NTVMDAVEFV LQNFTEMNKL WVRIQHQGPG
201: TVREKQEKER NELRDLVGKN LHVLGQIEGV DLEMYKETVL PRVLEQVVNC KDKLAQYYLM ECIIQVFPDE YHLQTLETLL AACTQLMPTV DTKIVLTQLM
301: DRLSNYAASS PDVLHEFLQV EAFAKLSNAI GKVIDTQLEM PIVGAMTLFV SLLTFTLRVH PDRLDYVDQV LGACVVKLSS VPKLEDARAM KQVVALLSAP
401: LEKYSDIVTA LTLSNYPRVM DHLDDGTNKV MAMLIIQSIM KTDSCISTAD KVEVLFELIK GLIKDLDETN AEELDEEDFQ EEQNSVARLI HMLDNEEPEE
501: MLKIICVVRR HLMTGGPRRL PFTVPPLVFS AVRLVRQLES QGGDIAGEDS ATPRKIFQIL NQTIEVLTSV PCPELALRLY LQCAEAASDC DLEPVAYEFF
601: TQAFMLYEEE IADSKAQVTA IHLIVGTLQR INVFGVENRD TLTHKATGYS ARLLKKPDQC RAVYACSHLF WVDDPDGIKD GERVLLCLRR ALRIANAAQQ
701: MASATRGSSG PVTLFVEILN KYIYFFEKGN PHITPSDIQS LIELINNEMQ SDNGNTTIHS DPFFTSTLRY IKFIKQKGGL MGEKYDPIKL

Arabidopsis Description

VPS35BVacuolar protein sorting-associated protein 35 [Source:UniProtKB/TrEMBL;Acc:A0A178WDK6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.