Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015806.1-P | Field mustard | cytosol | 99.87 | 98.02 |
| CDX73207 | Canola | cytosol | 11.24 | 97.8 |
| CDX73208 | Canola | cytosol | 86.24 | 95.66 |
| AT1G75850.1 | Thale cress | cytosol | 94.7 | 94.94 |
| CDY13527 | Canola | mitochondrion | 78.79 | 94.69 |
| CDY13526 | Canola | cytosol | 12.63 | 83.33 |
| VIT_18s0001g14680.t01 | Wine grape | cytosol | 82.2 | 82.41 |
| KRH05971 | Soybean | cytosol | 82.2 | 81.58 |
| KRH17452 | Soybean | endoplasmic reticulum | 81.94 | 81.43 |
| Solyc12g089340.1.1 | Tomato | cytosol, nucleus, plastid | 80.3 | 80.4 |
| PGSC0003DMT400075420 | Potato | cytosol | 79.8 | 79.9 |
| Zm00001d034492_P006 | Maize | endoplasmic reticulum, extracellular | 69.19 | 78.06 |
| EER93269 | Sorghum | cytosol | 77.65 | 76.59 |
| TraesCS5A01G448400.1 | Wheat | golgi | 76.52 | 76.42 |
| TraesCS5D01G455000.1 | Wheat | cytosol | 76.52 | 76.42 |
| Zm00001d013059_P003 | Maize | cytosol | 77.27 | 74.27 |
| Os03t0801600-01 | Rice | cytosol | 77.53 | 71.31 |
| CDY24377 | Canola | cytosol | 68.81 | 69.16 |
| CDY39067 | Canola | endoplasmic reticulum, golgi | 25.63 | 69.05 |
| CDY20826 | Canola | cytosol | 68.69 | 69.04 |
| TraesCS5B01G453000.1 | Wheat | cytosol | 76.39 | 68.52 |
| CDX73731 | Canola | cytosol | 65.78 | 65.95 |
| CDX77995 | Canola | cytosol | 65.53 | 65.7 |
| KRH37553 | Soybean | cytosol | 9.6 | 65.52 |
| CDY59615 | Canola | cytosol | 65.28 | 64.87 |
| GSMUA_Achr3P01920_001 | Banana | cytosol | 4.8 | 45.78 |
| GSMUA_Achr5P27230_001 | Banana | cytosol | 5.56 | 35.2 |
Protein Annotations
| Gene3D:1.25.40.660 | MapMan:22.5.5.3.1 | GO:A0A078DEK7 | InterPro:ARM-type_fold | EnsemblPlants:CDX87655 | ProteinID:CDX87655 |
| ProteinID:CDX87655.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0030906 | GO:GO:0042147 | EnsemblPlantsGene:GSBRNA2T00146662001 |
| PFAM:PF03635 | PIRSF:PIRSF009375 | PANTHER:PTHR11099 | PANTHER:PTHR11099:SF1 | SUPFAM:SSF48371 | UniParc:UPI0004EEA74C |
| InterPro:Vps35 | SEG:seg | : | : | : | : |
Description
BnaA07g32180D
Coordinates
chrLK031850:+:1661452..1667969
Molecular Weight (calculated)
89880.8 Da
IEP (calculated)
5.095
GRAVY (calculated)
-0.136
Length
792 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRLAGVEDE EKWLAEGIAG IQHNAFFMHR ALDANNLREV LKYSALMLSE LRTSKLSPQK YYDLYMRAFD ELRQLEVFFK DESRHGLPVV DLYELVQHAG
101: NILPRMYLLC TVGSVYIKSK QAPSKDVLKD LVEMCRGVQH PIRGLFLRSY LAQVSRDKLP EIGSEYEGDA NTVMDAVEFV LQNFTEMNKL WVRIQHQGPG
201: TVREKQEKER NELRDLVGKN LHVLGQIEGV DLEMYKETVL PRVLEQVVNC KDELAQYYLM ECIIQVFPDE YHLQTLETLL AACTQLMPTV DTKIVLTQLM
301: DRLSNYAASS PDVLHEFLQV EAFAKLSNAI GKVIDTQIEM PIVGAMTLFV SLLTFTLRVH PDRLDYVDQI LGACVVKLSS VPKLEDARAM KQVVALLSAP
401: LEKYNDIVTA LTLSNYPRVM DHLDDGTNKV MAMLIIQSIM KNNSCISTAD KVEVLFELIK GLIKDLDGTD TEELDEEDFQ EEQNSVARLI HMLDNEEPEE
501: MLKIICVVRK HLMTGGTRRL PFTVPPLVFS ALRLVRQLDS QGGDITGEEV SATPRKIFQI LNQTIEVLSS VPCPELALRL YLQCAEAASD CDLEPAAYEF
601: FTQAFILYEE EIADSKAQVT AIHLIIGTLQ RINVFGVENR DTLTHKATGY SARLLKKPDQ CRAVYACSHL FWVDDIDGIK DGERALLCLR RALRIANAAQ
701: QMSNATRGSS GPVTLFVEIL NKYIYFYEKG NPHITPSDIQ SLIELINTEM QSDDNGNRRT HSDPFFTSTL RYIRFQKQKG GLIGDKYDLI KL
101: NILPRMYLLC TVGSVYIKSK QAPSKDVLKD LVEMCRGVQH PIRGLFLRSY LAQVSRDKLP EIGSEYEGDA NTVMDAVEFV LQNFTEMNKL WVRIQHQGPG
201: TVREKQEKER NELRDLVGKN LHVLGQIEGV DLEMYKETVL PRVLEQVVNC KDELAQYYLM ECIIQVFPDE YHLQTLETLL AACTQLMPTV DTKIVLTQLM
301: DRLSNYAASS PDVLHEFLQV EAFAKLSNAI GKVIDTQIEM PIVGAMTLFV SLLTFTLRVH PDRLDYVDQI LGACVVKLSS VPKLEDARAM KQVVALLSAP
401: LEKYNDIVTA LTLSNYPRVM DHLDDGTNKV MAMLIIQSIM KNNSCISTAD KVEVLFELIK GLIKDLDGTD TEELDEEDFQ EEQNSVARLI HMLDNEEPEE
501: MLKIICVVRK HLMTGGTRRL PFTVPPLVFS ALRLVRQLDS QGGDITGEEV SATPRKIFQI LNQTIEVLSS VPCPELALRL YLQCAEAASD CDLEPAAYEF
601: FTQAFILYEE EIADSKAQVT AIHLIIGTLQ RINVFGVENR DTLTHKATGY SARLLKKPDQ CRAVYACSHL FWVDDIDGIK DGERALLCLR RALRIANAAQ
701: QMSNATRGSS GPVTLFVEIL NKYIYFYEKG NPHITPSDIQ SLIELINTEM QSDDNGNRRT HSDPFFTSTL RYIRFQKQKG GLIGDKYDLI KL
001: MRTLAGVEDE DKWLAEGIAG IQHNAFFMHR ALDANNLREV LKYSALMLSE LRTSKLSPQK YYDLYMRAFD QLRQLEIFFK DESRHGLPVV DLYELVQHAG
101: NILPRMYLLC TVGSVYIKSK QAPSKDVLKD LVEMCRGVQH PIRGLFLRSY LAQVSRDKLP EIGSDYEGDA NTVMDAVEFV LQNFTEMNKL WVRIQHQGPG
201: TVREKQEKER NELRDLVGKN LHVLGQIEGV DLEMYKETVL PRVLEQVVNC KDKLAQYYLM ECIIQVFPDE YHLQTLETLL AACTQLMPTV DTKIVLTQLM
301: DRLSNYAASS PDVLHEFLQV EAFAKLSNAI GKVIDTQLEM PIVGAMTLFV SLLTFTLRVH PDRLDYVDQV LGACVVKLSS VPKLEDARAM KQVVALLSAP
401: LEKYSDIVTA LTLSNYPRVM DHLDDGTNKV MAMLIIQSIM KTDSCISTAD KVEVLFELIK GLIKDLDETN AEELDEEDFQ EEQNSVARLI HMLDNEEPEE
501: MLKIICVVRR HLMTGGPRRL PFTVPPLVFS AVRLVRQLES QGGDIAGEDS ATPRKIFQIL NQTIEVLTSV PCPELALRLY LQCAEAASDC DLEPVAYEFF
601: TQAFMLYEEE IADSKAQVTA IHLIVGTLQR INVFGVENRD TLTHKATGYS ARLLKKPDQC RAVYACSHLF WVDDPDGIKD GERVLLCLRR ALRIANAAQQ
701: MASATRGSSG PVTLFVEILN KYIYFFEKGN PHITPSDIQS LIELINNEMQ SDNGNTTIHS DPFFTSTLRY IKFIKQKGGL MGEKYDPIKL
101: NILPRMYLLC TVGSVYIKSK QAPSKDVLKD LVEMCRGVQH PIRGLFLRSY LAQVSRDKLP EIGSDYEGDA NTVMDAVEFV LQNFTEMNKL WVRIQHQGPG
201: TVREKQEKER NELRDLVGKN LHVLGQIEGV DLEMYKETVL PRVLEQVVNC KDKLAQYYLM ECIIQVFPDE YHLQTLETLL AACTQLMPTV DTKIVLTQLM
301: DRLSNYAASS PDVLHEFLQV EAFAKLSNAI GKVIDTQLEM PIVGAMTLFV SLLTFTLRVH PDRLDYVDQV LGACVVKLSS VPKLEDARAM KQVVALLSAP
401: LEKYSDIVTA LTLSNYPRVM DHLDDGTNKV MAMLIIQSIM KTDSCISTAD KVEVLFELIK GLIKDLDETN AEELDEEDFQ EEQNSVARLI HMLDNEEPEE
501: MLKIICVVRR HLMTGGPRRL PFTVPPLVFS AVRLVRQLES QGGDIAGEDS ATPRKIFQIL NQTIEVLTSV PCPELALRLY LQCAEAASDC DLEPVAYEFF
601: TQAFMLYEEE IADSKAQVTA IHLIVGTLQR INVFGVENRD TLTHKATGYS ARLLKKPDQC RAVYACSHLF WVDDPDGIKD GERVLLCLRR ALRIANAAQQ
701: MASATRGSSG PVTLFVEILN KYIYFFEKGN PHITPSDIQS LIELINNEMQ SDNGNTTIHS DPFFTSTLRY IKFIKQKGGL MGEKYDPIKL
Arabidopsis Description
VPS35BVacuolar protein sorting-associated protein 35 [Source:UniProtKB/TrEMBL;Acc:A0A178WDK6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.