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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g083560.2.1 Tomato cytosol 99.75 99.75
PGSC0003DMT400058024 Potato cytosol 90.63 90.63
KRH76626 Soybean endoplasmic reticulum 82.28 81.86
KRH28827 Soybean cytosol, endoplasmic reticulum, nucleus 82.15 81.74
VIT_04s0023g03870.t01 Wine grape cytosol, mitochondrion 83.16 78.78
EER93269 Sorghum cytosol 79.11 77.83
TraesCS5D01G455000.1 Wheat cytosol 78.1 77.81
TraesCS5A01G448400.1 Wheat golgi 78.1 77.81
PGSC0003DMT400075420 Potato cytosol 77.59 77.5
Zm00001d034492_P006 Maize endoplasmic reticulum, extracellular 68.73 77.35
AT2G17790.1 Thale cress cytosol 76.08 76.37
CDY24377 Canola cytosol 75.82 76.02
Bra002092.1-P Field mustard cytosol 75.82 76.02
CDY20826 Canola cytosol 75.57 75.76
Zm00001d013059_P003 Maize cytosol 78.99 75.73
Os03t0801600-01 Rice cytosol 79.37 72.82
TraesCS5B01G453000.1 Wheat cytosol 77.97 69.76
CDX73731 Canola cytosol 69.49 69.49
AT3G51310.1 Thale cress cytosol 69.49 69.49
CDX77995 Canola cytosol 69.37 69.37
Bra036818.1-P Field mustard cytosol 69.37 69.1
CDY59615 Canola cytosol 68.99 68.38
KRH15953 Soybean cytosol 5.19 57.75
HORVU7Hr1G081830.7 Barley cytosol, endoplasmic reticulum, plastid 9.87 44.07
Protein Annotations
Gene3D:1.25.40.660EntrezGene:102599757MapMan:22.5.5.3.1InterPro:ARM-type_foldGO:GO:0003674GO:GO:0005215
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829
GO:GO:0006810GO:GO:0008150GO:GO:0008565GO:GO:0015031GO:GO:0016020GO:GO:0030904
GO:GO:0030906GO:GO:0042147UniProt:M0ZW59PFAM:PF03635EnsemblPlantsGene:PGSC0003DMG400003648PGSC:PGSC0003DMG400003648
EnsemblPlants:PGSC0003DMT400009386PIRSF:PIRSF009375PANTHER:PTHR11099PANTHER:PTHR11099:SF1SUPFAM:SSF48371UniParc:UPI0002958EFE
InterPro:Vps35RefSeq:XP_006340766.1SEG:seg:::
Description
Vacuolar sorting protein [Source:PGSC_GENE;Acc:PGSC0003DMG400003648]
Coordinates
chr2:+:39134158..39143282
Molecular Weight (calculated)
89527.8 Da
IEP (calculated)
4.917
GRAVY (calculated)
-0.198
Length
790 amino acids
Sequence
(BLAST)
001: MITNGVEDEE KWLAAGIAGL QQNAFYMHRA LDSNNLKDAL KYSAQMLSEL RTSKLSPHKY YELYMRAFDE LRKLEIFFRE ETNRGCSIVE LYELVQHAGN
101: ILPRLYLLCT VGSVYIKSKE APAKDILKDL VEMCRSIQHP LRGLFLRSYL SQVSRDKLPD IGSEYEGDAD TVMDAVEFVL QNFTEMNKLW VRMQHQGHAR
201: EKEKREKERS ELRDLVGKNL HVLGQIEGID LDLYKDMVLP RVLEQVVNCK DEIAQGYLMD CIIQVFPDEY HLQTLETLLG ACPQFQSSVD IKTVLARLME
301: RLSNYAALSA EVLPEFFQVE AFAKLNSAIG KVIEAQEDMP IAGVVTLYSS LLTFSLHVHP DRLDYVDQIL GACVQKLSGK GKLKDNKATK QIVALLSAPL
401: EKYKDIDTAL KLSNYPRLME NLDDSTSKEM ANVLVQNILK NKTCISTAEK VEALFELMKA LIRDLDEGVD DELDEDDFQE EQNSVAQLIQ MLHNDDPEEM
501: LKIICAVKKH ILTGGPKRLP FTVPPLIFNS LKFVRRLHSH DENVPEEESS AMPKKFFQIL NQIIEALSIV PVPELALKLY LECAEAANDS DIEPVAYEFF
601: TQAYILYEEE ISDSKAQVTA IQLIIGTLQR MHIFGVENRD TLTHKATGYS AKLLKKPDQC RAVYACSHLF WVDDQDNIKD GERVLLCLKR ALRIANAAQQ
701: MSNATRGSSG SVLLFIEILN KYLYFFEKGV SQINVASVQS LIELITTEMQ SENTTADPAA DAFFASTLRY IQFQKDKGGA VGEKFESINS
Best Arabidopsis Sequence Match ( AT2G17790.1 )
(BLAST)
001: MIADGSEDEE KWLAAGAAAF KQNAFYMQRA IDSNNLKDAL KYSAQMLSEL RTSKLSPHKY YDLYMRAFDE LRKLEIFFME ETRRGCSVIE LYELVQHAGN
101: ILPRLYLLCT AGSVYIKTKE APAKEILKDL VEMCRGIQHP LRGLFLRSYL AQISRDKLPD IGSEYEGDAD TVIDAVEFVL LNFTEMNKLW VRMQHQGPAR
201: EKERREKERG ELRDLVGKNL HVLSQLEGVD LDMYRDTVLP RVLEQIVNCR DEIAQYYLID CIIQVFPDEY HLQTLDVLLG ACPQLQASVD IMTVLSRLME
301: RLSNYAALNA EVLPYFLQVE AFSKLNNAIG KVIEAQEDMP ILSAVTLYSS LLKFTLHVHP DRLDYADQVL GSCVKQLSGK GKIDDTRATK ELVSLLSAPL
401: EKYNDVVTAL KLTNYPLVVE YLDTETKRIM ATVIVRSIMK NNTLITTAEK VEALFELIKG IINDLDEPQG LEVDEDDFQE EQNSVALLIH MLYNDDPEEM
501: FKIVNVLKKH FLTGGPKRLK FTIPPLVVST LKLIRRLPVE GDNPFGKEAS VTATKIFQFL NQIIEALPNV PSPDLAFRLY LQCAEAADKC DEEPIAYEFF
601: TQAYILYEEE ISDSKAQVTA LQLIIGTLQR MQVFGVENRD TLTHKATGYA AKLLKKPDQC RAVYACSHLF WLEDRETIQD GERVLLCLKR ALKIANSAQQ
701: VANTARGSTG SVTLFIEILN KYLYFYEKGV PQITVESVES LIKLIKNEES MPSDPSAESF FATTLEFMEF QKQKEGAIGE RYQAIKV
Arabidopsis Description
VPS35AVacuolar protein sorting-associated protein 35A [Source:UniProtKB/Swiss-Prot;Acc:Q7X659]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.