Factsheet for HORVU7Hr1G081830.7

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol

Predictor Summary:

endoplasmic reticulum 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plastid
Any Predictor:	cytosol, endoplasmic reticulum, plastid
MultiLoc:	endoplasmic reticulum
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G012920.2
HORVU2Hr1G080770.4
HORVU4Hr1G007550.1
HORVU4Hr1G031010.1
HORVU4Hr1G066900.1
HORVU7Hr1G043470.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17790.1	HORVU4Hr1G031010.1	AT5G53530.1	17889650
AT3G51310.1	HORVU0Hr1G012920.2	AT3G17840.1	15618630
AT3G51310.1	HORVU2Hr1G080770.4	AT3G17840.1	15618630
AT3G51310.1	HORVU4Hr1G007550.1	AT3G17840.1	15618630
AT3G51310.1	HORVU4Hr1G066900.1	AT3G17840.1	15618630
AT3G51310.1	HORVU7Hr1G043470.2	AT3G17840.1	15618630

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G107250.1	Barley	cytosol	47.46	10.59
Solyc03g033400.2.1	Tomato	cytosol, nucleus	45.2	10.13
PGSC0003DMT400058024	Potato	cytosol	45.2	10.13
Solyc02g083560.2.1	Tomato	cytosol	44.07	9.87
PGSC0003DMT400009386	Potato	cytosol	44.07	9.87
KRH76626	Soybean	endoplasmic reticulum	43.5	9.7
KRH28827	Soybean	cytosol, endoplasmic reticulum, nucleus	42.94	9.57
AT2G17790.1	Thale cress	cytosol	42.37	9.53
Bra002092.1-P	Field mustard	cytosol	42.37	9.52
CDY20826	Canola	cytosol	42.37	9.52
CDY24377	Canola	cytosol	42.37	9.52
VIT_04s0023g03870.t01	Wine grape	cytosol, mitochondrion	44.63	9.47
CDY59615	Canola	cytosol	39.55	8.78
CDX77995	Canola	cytosol	38.98	8.73
Bra036818.1-P	Field mustard	cytosol	38.98	8.7
CDX73731	Canola	cytosol	38.42	8.61
AT3G51310.1	Thale cress	cytosol	38.42	8.61
KRH15953	Soybean	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU7Hr1G081830.7	EnsemblPlantsGene:HORVU7Hr1G081830	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006810	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0030906
GO:GO:0042147	InterPro:Vps35	PANTHER:PTHR11099	PANTHER:PTHR11099:SF1	PFAM:PF03635	SEG:seg
SignalP:SignalP-noTM	UniParc:UPI000B485765	UniProt:A0A287X316	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr7H:-:488676081..488678993

Molecular Weight (calculated)

20299.8 Da

IEP (calculated)

9.967

GRAVY (calculated)

-0.341

Length

177 amino acids

Sequence
(BLAST)

001: FLFFILKLII THHTPCIINN PVYHDALTQP NPRGQEPRAT IPNPPSESRR RRPDPPRLRR RTTRRPPGCC PTGLQDSNNL KDALKYSAQM LSELRTSRLS
101: LHKYYELYMR AFDEMRKLEM FFREETRRGS CSVVDLYELL QHAGNVLPRL CGACGVLWIV SAPALFATSL LVLGPLP

Best Arabidopsis Sequence Match ( AT2G17790.1 )
(BLAST)

001: MIADGSEDEE KWLAAGAAAF KQNAFYMQRA IDSNNLKDAL KYSAQMLSEL RTSKLSPHKY YDLYMRAFDE LRKLEIFFME ETRRGCSVIE LYELVQHAGN
101: ILPRLYLLCT AGSVYIKTKE APAKEILKDL VEMCRGIQHP LRGLFLRSYL AQISRDKLPD IGSEYEGDAD TVIDAVEFVL LNFTEMNKLW VRMQHQGPAR
201: EKERREKERG ELRDLVGKNL HVLSQLEGVD LDMYRDTVLP RVLEQIVNCR DEIAQYYLID CIIQVFPDEY HLQTLDVLLG ACPQLQASVD IMTVLSRLME
301: RLSNYAALNA EVLPYFLQVE AFSKLNNAIG KVIEAQEDMP ILSAVTLYSS LLKFTLHVHP DRLDYADQVL GSCVKQLSGK GKIDDTRATK ELVSLLSAPL
401: EKYNDVVTAL KLTNYPLVVE YLDTETKRIM ATVIVRSIMK NNTLITTAEK VEALFELIKG IINDLDEPQG LEVDEDDFQE EQNSVALLIH MLYNDDPEEM
501: FKIVNVLKKH FLTGGPKRLK FTIPPLVVST LKLIRRLPVE GDNPFGKEAS VTATKIFQFL NQIIEALPNV PSPDLAFRLY LQCAEAADKC DEEPIAYEFF
601: TQAYILYEEE ISDSKAQVTA LQLIIGTLQR MQVFGVENRD TLTHKATGYA AKLLKKPDQC RAVYACSHLF WLEDRETIQD GERVLLCLKR ALKIANSAQQ
701: VANTARGSTG SVTLFIEILN KYLYFYEKGV PQITVESVES LIKLIKNEES MPSDPSAESF FATTLEFMEF QKQKEGAIGE RYQAIKV

Arabidopsis Description

VPS35AVacuolar protein sorting-associated protein 35A [Source:UniProtKB/Swiss-Prot;Acc:Q7X659]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.