Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G448400.1 | Wheat | golgi | 100.0 | 100.0 |
| TraesCS5D01G455000.1 | Wheat | cytosol | 99.87 | 99.87 |
| EER93269 | Sorghum | cytosol | 95.71 | 94.52 |
| Zm00001d034492_P006 | Maize | endoplasmic reticulum, extracellular | 82.09 | 92.73 |
| Zm00001d013059_P003 | Maize | cytosol | 94.58 | 91.02 |
| TraesCS5B01G453000.1 | Wheat | cytosol | 99.87 | 89.69 |
| Os03t0801600-01 | Rice | cytosol | 94.7 | 87.22 |
| GSMUA_Achr9P11120_001 | Banana | cytosol | 86.13 | 86.57 |
| GSMUA_Achr4P17490_001 | Banana | cytosol | 80.2 | 80.4 |
| HORVU7Hr1G081830.7 | Barley | cytosol, endoplasmic reticulum, plastid | 10.59 | 47.46 |
Protein Annotations
| Gene3D:1.25.40.660 | MapMan:22.5.5.3.1 | EMBL:AK358378 | EMBL:AK362704 | InterPro:ARM-type_fold | UniProt:F2D3C1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008565 | GO:GO:0015031 |
| GO:GO:0016020 | GO:GO:0030904 | GO:GO:0030906 | GO:GO:0042147 | EnsemblPlantsGene:HORVU5Hr1G107250 | EnsemblPlants:HORVU5Hr1G107250.1 |
| PFAM:PF03635 | PIRSF:PIRSF009375 | PANTHER:PTHR11099 | PANTHER:PTHR11099:SF1 | SUPFAM:SSF48371 | UniParc:UPI000200547B |
| InterPro:Vps35 | SEG:seg | : | : | : | : |
Description
Vacuolar protein sorting-associated protein 35 [Source:UniProtKB/TrEMBL;Acc:F2D3C1]
Coordinates
chrchr5H:-:626279616..626288303
Molecular Weight (calculated)
89865.3 Da
IEP (calculated)
5.013
GRAVY (calculated)
-0.206
Length
793 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPDGGGDDE ERWLAEGIAG VQQNAFYMHR ALDSNNLKDA LKYSAQMLSE LRTSRLSPHK YYELYMRAFD EMRKLEMFFR EETRRGSCSV VDLYELVQHA
101: GNVLPRLYLL CTVGSVYIKS KEAPAKDVLK DLVEMCRGIQ HPLRGLFLRS YLSQISRDKL PDIGSEYEGD ADSINDAVEF VLQNFIEMNK LWVRMQHQGP
201: VREKDKRGKE RNELRDLVGK NLHVLSQIEG VDLEMYKENV LPRISEQVVN CKDDLAQFYL MDCIIQVFPD EYHLQTLETL LSAFPQLQPS VDIKTVLSQL
301: MDRLSNYAAT SPEVLPEFLQ VEAFAKFSNA IGKVIEAQVD MPVVGAVTLY VSLLTFTLRV HPDRLDYVDQ VLGACVKKLS GKEKLEDSRA TKQIVALLSA
401: PLEKYSNIVT ALELSNYPRV MDYLDNATTK VMALVIIQSI MKNTTCISTS DKIEALFDLI KGLIKDMDGA QDDELDEEDF KEEQNSVARL IHMLHNDDHD
501: EMLKILCTVQ KHILQGGPKR LPFTVPSLVF SALKLVRRLQ GQDGDVTGEE VPATPKKIFQ ILHQTIEALQ CIPCPELSLR LYLQCAEAAN DCDLEPVAYE
601: FFTQAFILYE EEIADSKAQI TALHLIIGTL QRMNIFGVEN RDTLTHKTTG YSAKLLKKPD QCRAVYACSH LFWTDDQDGI MDGERVLLCL KRALRIANAA
701: QQMANVSKGS SGSVILFIEI LNKYLYFFEK GIPQITNTVI QDLIELIRTE KQNDSSASDP SAEAFFASTL RYIEFQKQKG GSIGEKYEQI KAS
101: GNVLPRLYLL CTVGSVYIKS KEAPAKDVLK DLVEMCRGIQ HPLRGLFLRS YLSQISRDKL PDIGSEYEGD ADSINDAVEF VLQNFIEMNK LWVRMQHQGP
201: VREKDKRGKE RNELRDLVGK NLHVLSQIEG VDLEMYKENV LPRISEQVVN CKDDLAQFYL MDCIIQVFPD EYHLQTLETL LSAFPQLQPS VDIKTVLSQL
301: MDRLSNYAAT SPEVLPEFLQ VEAFAKFSNA IGKVIEAQVD MPVVGAVTLY VSLLTFTLRV HPDRLDYVDQ VLGACVKKLS GKEKLEDSRA TKQIVALLSA
401: PLEKYSNIVT ALELSNYPRV MDYLDNATTK VMALVIIQSI MKNTTCISTS DKIEALFDLI KGLIKDMDGA QDDELDEEDF KEEQNSVARL IHMLHNDDHD
501: EMLKILCTVQ KHILQGGPKR LPFTVPSLVF SALKLVRRLQ GQDGDVTGEE VPATPKKIFQ ILHQTIEALQ CIPCPELSLR LYLQCAEAAN DCDLEPVAYE
601: FFTQAFILYE EEIADSKAQI TALHLIIGTL QRMNIFGVEN RDTLTHKTTG YSAKLLKKPD QCRAVYACSH LFWTDDQDGI MDGERVLLCL KRALRIANAA
701: QQMANVSKGS SGSVILFIEI LNKYLYFFEK GIPQITNTVI QDLIELIRTE KQNDSSASDP SAEAFFASTL RYIEFQKQKG GSIGEKYEQI KAS
001: MRTLAGVEDE DKWLAEGIAG IQHNAFFMHR ALDANNLREV LKYSALMLSE LRTSKLSPQK YYDLYMRAFD QLRQLEIFFK DESRHGLPVV DLYELVQHAG
101: NILPRMYLLC TVGSVYIKSK QAPSKDVLKD LVEMCRGVQH PIRGLFLRSY LAQVSRDKLP EIGSDYEGDA NTVMDAVEFV LQNFTEMNKL WVRIQHQGPG
201: TVREKQEKER NELRDLVGKN LHVLGQIEGV DLEMYKETVL PRVLEQVVNC KDKLAQYYLM ECIIQVFPDE YHLQTLETLL AACTQLMPTV DTKIVLTQLM
301: DRLSNYAASS PDVLHEFLQV EAFAKLSNAI GKVIDTQLEM PIVGAMTLFV SLLTFTLRVH PDRLDYVDQV LGACVVKLSS VPKLEDARAM KQVVALLSAP
401: LEKYSDIVTA LTLSNYPRVM DHLDDGTNKV MAMLIIQSIM KTDSCISTAD KVEVLFELIK GLIKDLDETN AEELDEEDFQ EEQNSVARLI HMLDNEEPEE
501: MLKIICVVRR HLMTGGPRRL PFTVPPLVFS AVRLVRQLES QGGDIAGEDS ATPRKIFQIL NQTIEVLTSV PCPELALRLY LQCAEAASDC DLEPVAYEFF
601: TQAFMLYEEE IADSKAQVTA IHLIVGTLQR INVFGVENRD TLTHKATGYS ARLLKKPDQC RAVYACSHLF WVDDPDGIKD GERVLLCLRR ALRIANAAQQ
701: MASATRGSSG PVTLFVEILN KYIYFFEKGN PHITPSDIQS LIELINNEMQ SDNGNTTIHS DPFFTSTLRY IKFIKQKGGL MGEKYDPIKL
101: NILPRMYLLC TVGSVYIKSK QAPSKDVLKD LVEMCRGVQH PIRGLFLRSY LAQVSRDKLP EIGSDYEGDA NTVMDAVEFV LQNFTEMNKL WVRIQHQGPG
201: TVREKQEKER NELRDLVGKN LHVLGQIEGV DLEMYKETVL PRVLEQVVNC KDKLAQYYLM ECIIQVFPDE YHLQTLETLL AACTQLMPTV DTKIVLTQLM
301: DRLSNYAASS PDVLHEFLQV EAFAKLSNAI GKVIDTQLEM PIVGAMTLFV SLLTFTLRVH PDRLDYVDQV LGACVVKLSS VPKLEDARAM KQVVALLSAP
401: LEKYSDIVTA LTLSNYPRVM DHLDDGTNKV MAMLIIQSIM KTDSCISTAD KVEVLFELIK GLIKDLDETN AEELDEEDFQ EEQNSVARLI HMLDNEEPEE
501: MLKIICVVRR HLMTGGPRRL PFTVPPLVFS AVRLVRQLES QGGDIAGEDS ATPRKIFQIL NQTIEVLTSV PCPELALRLY LQCAEAASDC DLEPVAYEFF
601: TQAFMLYEEE IADSKAQVTA IHLIVGTLQR INVFGVENRD TLTHKATGYS ARLLKKPDQC RAVYACSHLF WVDDPDGIKD GERVLLCLRR ALRIANAAQQ
701: MASATRGSSG PVTLFVEILN KYIYFFEKGN PHITPSDIQS LIELINNEMQ SDNGNTTIHS DPFFTSTLRY IKFIKQKGGL MGEKYDPIKL
Arabidopsis Description
VPS35BVacuolar protein sorting-associated protein 35 [Source:UniProtKB/TrEMBL;Acc:A0A178WDK6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.