Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G107250.1 | Barley | cytosol | 86.57 | 86.13 |
| TraesCS5A01G448400.1 | Wheat | golgi | 86.57 | 86.13 |
| TraesCS5D01G455000.1 | Wheat | cytosol | 86.57 | 86.13 |
| Zm00001d034492_P006 | Maize | endoplasmic reticulum, extracellular | 75.79 | 85.19 |
| EER93269 | Sorghum | cytosol | 86.69 | 85.18 |
| GSMUA_Achr4P17490_001 | Banana | cytosol | 83.14 | 82.93 |
| Zm00001d013059_P003 | Maize | cytosol | 86.19 | 82.52 |
| Os03t0801600-01 | Rice | cytosol | 86.57 | 79.33 |
| TraesCS5B01G453000.1 | Wheat | cytosol | 86.44 | 77.24 |
| GSMUA_Achr3P01920_001 | Banana | cytosol | 6.34 | 60.24 |
| GSMUA_Achr5P27230_001 | Banana | cytosol | 5.83 | 36.8 |
Protein Annotations
| Gene3D:1.25.40.660 | MapMan:22.5.5.3.1 | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0008565 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0030904 | GO:GO:0030906 |
| GO:GO:0042147 | EnsemblPlantsGene:GSMUA_Achr9G11120_001 | EnsemblPlants:GSMUA_Achr9P11120_001 | EnsemblPlants:GSMUA_Achr9T11120_001 | UniProt:M0TZC1 | PFAM:PF03635 |
| PIRSF:PIRSF009375 | PANTHER:PTHR11099 | PANTHER:PTHR11099:SF1 | SUPFAM:SSF48371 | UniParc:UPI00029634B7 | InterPro:Vps35 |
| SEG:seg | : | : | : | : | : |
Description
Putative Vacuolar protein sorting-associated protein 35 [Source:GMGC_GENE;Acc:GSMUA_Achr9G11120_001]
Coordinates
chr9:+:7244791..7260783
Molecular Weight (calculated)
89373.2 Da
IEP (calculated)
5.465
GRAVY (calculated)
-0.157
Length
789 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPHGDDEEK WLAEGIAGIQ HNAFYMHRAL DSNDLKDALR YSVQMLSELR TSLLSPHKYY ELYMRAFDEL RKMEMFFREE TARGTISVIE LYELVQHAGN
101: ILPRLYLLCT VGSVYIKSKE APAKDVLKDL VEMCRGIQHP VRGLFLRSYL CQISRDKLPD IGSEYEGDAD TVNHAIEFVI QNFTEMNKLW VRMHHQGPTR
201: EKDKREKERS QLRDLVGKNL HVLSQIEGVD LDIYKETVLP RVLEQVVNCK DELAQHYLMD CIIQVFPDEY HLQTLETLLG AFPQLQPTVD IKTVLSQLMD
301: RLSNYAASSI EVLPEFLQVE AFSKLSNAIG KVIEAQVDMP VVGAITLYVS LLTFTLRVHP DRLDYVDQVL GACVKKLSGR AKLEDSRATK QIVALLSAPL
401: EKYNDIGTAL KLPNYPRVMD HLDNGTNKVM AVVIIQSIMK NTTCISTADK VEALFELIKG LIRDMDETQD DEIDEEDFKE EQNSVARLIH MLHNDDPEEM
501: LKILCTVRKH IILGGPKRLP FTVPPLVFSA LKLVRHLQGQ DGDVIGEEIS ATPKKIFQIL HQTIEALLSV PSPELALRLY LQCAEAANDC DLEPVAYEFF
601: TQAFILYEEE VADSKAQVTA IHLIIGTLQR MNVFGVENRD TLTHKATGYS AKLLKKPDQC RAVYACSHLF WVDEQDGIKD GERVLLCLKR ALRIANAAQQ
701: MANVTRGSSG PVVLFIEILN KYLYFFEKGN PQVTSSVLQG LIELIKTEMQ TDGSSDPSAD AFFASTLRYI QFQKQKGGAM GEKYDPIKI
101: ILPRLYLLCT VGSVYIKSKE APAKDVLKDL VEMCRGIQHP VRGLFLRSYL CQISRDKLPD IGSEYEGDAD TVNHAIEFVI QNFTEMNKLW VRMHHQGPTR
201: EKDKREKERS QLRDLVGKNL HVLSQIEGVD LDIYKETVLP RVLEQVVNCK DELAQHYLMD CIIQVFPDEY HLQTLETLLG AFPQLQPTVD IKTVLSQLMD
301: RLSNYAASSI EVLPEFLQVE AFSKLSNAIG KVIEAQVDMP VVGAITLYVS LLTFTLRVHP DRLDYVDQVL GACVKKLSGR AKLEDSRATK QIVALLSAPL
401: EKYNDIGTAL KLPNYPRVMD HLDNGTNKVM AVVIIQSIMK NTTCISTADK VEALFELIKG LIRDMDETQD DEIDEEDFKE EQNSVARLIH MLHNDDPEEM
501: LKILCTVRKH IILGGPKRLP FTVPPLVFSA LKLVRHLQGQ DGDVIGEEIS ATPKKIFQIL HQTIEALLSV PSPELALRLY LQCAEAANDC DLEPVAYEFF
601: TQAFILYEEE VADSKAQVTA IHLIIGTLQR MNVFGVENRD TLTHKATGYS AKLLKKPDQC RAVYACSHLF WVDEQDGIKD GERVLLCLKR ALRIANAAQQ
701: MANVTRGSSG PVVLFIEILN KYLYFFEKGN PQVTSSVLQG LIELIKTEMQ TDGSSDPSAD AFFASTLRYI QFQKQKGGAM GEKYDPIKI
001: MRTLAGVEDE DKWLAEGIAG IQHNAFFMHR ALDANNLREV LKYSALMLSE LRTSKLSPQK YYDLYMRAFD QLRQLEIFFK DESRHGLPVV DLYELVQHAG
101: NILPRMYLLC TVGSVYIKSK QAPSKDVLKD LVEMCRGVQH PIRGLFLRSY LAQVSRDKLP EIGSDYEGDA NTVMDAVEFV LQNFTEMNKL WVRIQHQGPG
201: TVREKQEKER NELRDLVGKN LHVLGQIEGV DLEMYKETVL PRVLEQVVNC KDKLAQYYLM ECIIQVFPDE YHLQTLETLL AACTQLMPTV DTKIVLTQLM
301: DRLSNYAASS PDVLHEFLQV EAFAKLSNAI GKVIDTQLEM PIVGAMTLFV SLLTFTLRVH PDRLDYVDQV LGACVVKLSS VPKLEDARAM KQVVALLSAP
401: LEKYSDIVTA LTLSNYPRVM DHLDDGTNKV MAMLIIQSIM KTDSCISTAD KVEVLFELIK GLIKDLDETN AEELDEEDFQ EEQNSVARLI HMLDNEEPEE
501: MLKIICVVRR HLMTGGPRRL PFTVPPLVFS AVRLVRQLES QGGDIAGEDS ATPRKIFQIL NQTIEVLTSV PCPELALRLY LQCAEAASDC DLEPVAYEFF
601: TQAFMLYEEE IADSKAQVTA IHLIVGTLQR INVFGVENRD TLTHKATGYS ARLLKKPDQC RAVYACSHLF WVDDPDGIKD GERVLLCLRR ALRIANAAQQ
701: MASATRGSSG PVTLFVEILN KYIYFFEKGN PHITPSDIQS LIELINNEMQ SDNGNTTIHS DPFFTSTLRY IKFIKQKGGL MGEKYDPIKL
101: NILPRMYLLC TVGSVYIKSK QAPSKDVLKD LVEMCRGVQH PIRGLFLRSY LAQVSRDKLP EIGSDYEGDA NTVMDAVEFV LQNFTEMNKL WVRIQHQGPG
201: TVREKQEKER NELRDLVGKN LHVLGQIEGV DLEMYKETVL PRVLEQVVNC KDKLAQYYLM ECIIQVFPDE YHLQTLETLL AACTQLMPTV DTKIVLTQLM
301: DRLSNYAASS PDVLHEFLQV EAFAKLSNAI GKVIDTQLEM PIVGAMTLFV SLLTFTLRVH PDRLDYVDQV LGACVVKLSS VPKLEDARAM KQVVALLSAP
401: LEKYSDIVTA LTLSNYPRVM DHLDDGTNKV MAMLIIQSIM KTDSCISTAD KVEVLFELIK GLIKDLDETN AEELDEEDFQ EEQNSVARLI HMLDNEEPEE
501: MLKIICVVRR HLMTGGPRRL PFTVPPLVFS AVRLVRQLES QGGDIAGEDS ATPRKIFQIL NQTIEVLTSV PCPELALRLY LQCAEAASDC DLEPVAYEFF
601: TQAFMLYEEE IADSKAQVTA IHLIVGTLQR INVFGVENRD TLTHKATGYS ARLLKKPDQC RAVYACSHLF WVDDPDGIKD GERVLLCLRR ALRIANAAQQ
701: MASATRGSSG PVTLFVEILN KYIYFFEKGN PHITPSDIQS LIELINNEMQ SDNGNTTIHS DPFFTSTLRY IKFIKQKGGL MGEKYDPIKL
Arabidopsis Description
VPS35BVacuolar protein sorting-associated protein 35 [Source:UniProtKB/TrEMBL;Acc:A0A178WDK6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.